Branchiostoma floridae (Florida lancelet): 118420233
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Entry
118420233 CDS
T01074
Name
(RefSeq) polycystic kidney disease and receptor for egg jelly-related protein-like
KO
K04986
polycystin 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bfo03037
]
118420233
04040 Ion channels [BR:
bfo04040
]
118420233
Cilium and associated proteins [BR:
bfo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118420233
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118420233
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Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Motif
Other DBs
NCBI-GeneID:
118420233
NCBI-ProteinID:
XP_035682846
UniProt:
A0A9J7MXZ8
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Position
7:25226935..25234059
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AA seq
817 aa
AA seq
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MSEYTLPTFTYLLYDDHLLLSAVYNSGVRHFSRAQRLVCCLTQTTLWMVGSAMWYGVRLG
AHDVILFDAGVITLRLSELIGTAATSFTVFLPVYAILVPMFRKQPPLEDHIPPGPIKTPT
SPSIRRFPYKTVAWILAILTSVCSSFFVIVYSLQFGAGRSQAWLKDFVLAFLFTTFVLEP
VQIFLIAYTKAVIIGPIVWSVTACVRGLLGTNLSGTGRPPIGVIQKRSRDYEVPARRVLP
PAPKKTDHDPNWVEKMTKGRSILVLLMFLLVFTGNAFYIGILGFDRHAYHVRTSLENTLL
SGYEEVATADDAWKWLSSELMPSLHPERGYSGQKLRWLDKQFPAGTNAFRIGSFRLERTT
EYPDDPIDIDLETSDQRLHPELMMNLITRALRRQSEQSCSYNRTASIVDEVRNGTSACLT
TVDLARDADQAAAVIDFLKQTDWILMVSDTLILRANFYHPDVKLFSSVVFRLQYLPGGAA
ELQPSIQTFRLFQYQTADDYVQMIFHILFVLFYIYSVLGEIWNIRKSGRAYFVNFWNILI
LSNIGLSTAVIVTFALRYIQAAAALRDIQQAKGLFGINEFVDISTAGQWDATFKEVLSFS
IFISTFSILRVLNFSRGVATVYALPHLLYSEAFGFAVYMLVIIVAYGFSGILIFGKNMET
FSAFKKTSYVLFEMGLGRPFVGVFADDMKAVDRVMGPLYYSTFVMVFVFYLLNLAVGMLC
NWLSYCKTAEDIGVDTAMGDYFWNSLRSLLGMRHEPQDFDDEAPLPDHFVDETLQRTDMV
LQEVERVTDLMYTFECKKRQLIQVQRLDAPQAGTSST
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtacaccctgccgacgtttacgtaccttctgtacgacgaccatctgctctta
tcagcagtgtacaactccggtgtgagacacttcagccgggcgcagcgcctggtctgctgc
ctgacgcagaccacactgtggatggtgggcagcgctatgtggtacggggtcagactgggg
gcacacgatgtcattctgttcgacgcaggagtcatcactctccgtctatcggaactgatt
ggtactgcagcaacatcattcacagtgttcctgccagtttacgcaatcctcgtgccgatg
tttcgcaagcagcctccgctggaggatcatattccgccaggaccgataaaaacgccgaca
tctccatccatccgccggtttccgtacaagacggttgcgtggatcctcgccatcctgacg
tctgtctgcagcagcttcttcgtcatcgtgtacagtctgcagtttggagccgggagaagc
caggcctggctgaaggacttcgtcctggcattcctgttcactacgtttgtactggagcct
gttcagatttttctgatcgcttacacaaaggcagtcatcatcggacctattgtctggtct
gtgaccgcttgtgttcggggacttttggggacgaacctttctggcacagggcgacctcca
attggtgttattcagaagaggagcagggattatgaagttcccgctcggagagttttgccg
ccagccccgaagaaaaccgaccatgacccgaactgggtcgagaagatgacaaaaggcaga
agcatcctggtgctcctgatgtttctcctcgtcttcactggaaatgccttttacatcggg
attctgggcttcgatagacacgcctaccatgtcaggacctcactggagaacacgctacta
tctggatatgaggaggtcgccacagcagacgatgcttggaagtggctgtcgtcggaactg
atgccgtccctccacccagagcgtgggtacagcgggcagaagctgaggtggctggacaaa
cagtttcctgctggaacaaacgcattccggatcggttcttttcgcctggagagaaccacc
gagtatccagatgacccaatagacatagacctcgaaaccagtgaccaaaggcttcatcct
gagctgatgatgaatctgatcacaagagctcttcgccgacagagcgaacaaagctgctct
tacaacaggactgcaagtattgtcgacgaagtcagaaatggcacttcggcgtgcttgacc
acggtggacctggcacgggatgctgatcaggctgctgcagtgatagacttcctaaagcag
accgactggatcctgatggtttcagacactctcattctccgggccaacttctaccaccct
gacgtgaagcttttcagcagcgtggtgttcaggctgcagtacctcccagggggcgctgct
gaactccagcccagtatccagaccttccgactgttccagtaccagacagcagacgactat
gtccagatgattttccacatcttgttcgtccttttctacatctacagcgtccttggtgag
atttggaacatacggaagagtggtcgtgcgtacttcgtcaatttctggaacatcttgatc
ctgagcaacattggcttgtcgacagccgtcattgtgacattcgcacttcggtacatccag
gcagctgctgcactgcgtgacatacaacaagcaaaagggctgttcggtatcaatgagttt
gtagacatcagtaccgcaggccaatgggacgctaccttcaaggaggtcctgtccttctcc
atcttcatcagtaccttcagcatcctgcgggttctcaacttctccaggggcgtggctacc
gtctacgctttgcctcatctgctatacagcgaagcctttgggtttgcggtgtacatgctg
gtcatcatagtggcctacggcttcagtgggatcttaatcttcggcaaaaacatggagacc
ttctccgcctttaagaaaacgtcgtacgtgctgtttgagatgggcttggggaggccgttc
gtcggagtctttgcggacgatatgaaggcagtggatcgtgtcatgggacctctgtattat
tctacgttcgtcatggtcttcgtcttttacctgctgaacctggcagtcgggatgctgtgt
aactggctgagctactgtaagacggctgaagacatcggcgtggacacggcgatgggagat
tacttctggaactccctcaggagtcttctgggcatgcgtcacgagccccaagactttgac
gatgaagcaccacttccggaccactttgtggatgagaccctccagcggacggacatggta
ctgcaggaagtggaaagggtgaccgacctcatgtacacctttgagtgcaagaagcgtcaa
ctgattcaagttcaaaggcttgacgcacctcaagcgggcacaagctcgacataa
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