Branchiostoma floridae (Florida lancelet): 118420314
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Entry
118420314 CDS
T01074
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118420314
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bfo01007
]
118420314
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118420314
Enzymes [BR:
bfo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
118420314
Amino acid related enzymes [BR:
bfo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118420314
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118420314
Prokaryotic type
118420314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
118420314
NCBI-ProteinID:
XP_035682962
UniProt:
A0A9J7LI95
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All DBs
Position
7:complement(16054557..16067489)
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AA seq
524 aa
AA seq
DB search
MQEKEGYVLAPCCRSSGDLQTYRRMVEIGVKIKGLKLDRPERWKERISEEVQKLLSLKEQ
LGDARPQKFQLKTPKGTRDYNPRQMAIREGVFKTIINCFKRHGAETIDTPVFELKETLTG
KYGEDAKLIYDLADQGGEILSLRYDLTVPFARYLAMNKINTIKRYHIAKVYRRDNPAMTR
GRYREFYQCDFDIAGQYDLMIPDAECVKIVAEILSELNVGDFIIKLNTRLLLDGMFAVCG
VPEDKFRTICSAVDKLDKTFWEDVRSEMVDEKGLAPEVADRIGEYVRLNGQLELVDQLMQ
DEQMMKNKMARQGLEEMKLLLTYCQLFGVLDKVSFDLSLARGLDYYTGVIYEAILTTEKV
QSDGGDKNEPVGVGSVAGGGRYDGLVGMFDPKGKKVPCVGVSIGIERLFSIMEAKAEAAE
GKVRTTETQVYVASGQKNMLEERMKLCNLLWEGGIKTELSYKKNPKLLNQFQYAEEHGIP
FLAIIGEQELKDGVVKVRNTSTREEETFPRDKLLEEIRTRVGPS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaaagaaggttacgtccttgccccatgttgtcggtcttctggcgatctgcag
acgtatagacgaatggttgagataggggtcaaaatcaaggggttgaagttggacagaccg
gagagatggaaagaacggataagtgaagaagttcaaaaactcctatcgcttaaagaacag
ctcggagatgctaggcctcaaaagttccagcttaaaacacccaagggcacaagagactac
aaccctcggcagatggccatcagagaaggggtgttcaaaacaatcatcaactgtttcaag
cgccacggagcagagacaatagacactccagtcttcgaactcaaggaaacactaacaggc
aagtacggggaggatgccaagctcatctatgacctggctgatcaaggtggcgagattctc
tccctcagatacgacttgaccgttccctttgctcgttacctggccatgaacaaaatcaac
actatcaaaagataccacattgccaaggtgtaccggagagacaaccctgccatgactcgg
ggcaggtacagggagttctaccaatgtgattttgacatagcaggtcagtatgacctgatg
atccctgatgcagagtgtgtgaagattgtagcagagatcctgtctgagctcaacgtggga
gactttatcatcaagttgaacacccgactactactggatgggatgtttgccgtttgtggg
gttcctgaagacaagttcagaaccatctgctctgctgtggacaaactggacaagacattt
tgggaggatgtacggtcagaaatggtggatgagaaaggcctggcccccgaagtggctgac
cgcatcggagagtatgttagactcaatggccagttagagctggttgatcagctgatgcag
gatgaacagatgatgaagaacaagatggcacgacagggactggaggagatgaagctcctc
ctcacctactgtcaactgtttggggttctggacaaggtgtcctttgacctgagtctggcc
agaggacttgactactacacaggagttatctacgaggctatcctgactacagaaaaagtt
cagtcggatggaggagacaagaacgagcctgtcggtgtgggcagtgttgcgggagggggg
cgctatgatggcctggtgggcatgtttgatcccaagggcaaaaaggtcccttgtgtggga
gtcagtatagggattgaaagactcttctctatcatggaggccaaggcagaggcagctgaa
ggaaaagtgcgcaccacagagacacaagtgtacgtggcatctggacagaagaatatgctg
gaggaacgcatgaagctctgtaacctgctgtgggaggggggcatcaagacagagctgtca
tacaagaagaacccgaagctgttgaaccagttccagtatgctgaggaacacggcattcca
ttcctggccatcattggtgaacaggagctgaaggatggagtcgtcaaagtacgcaacacc
agcaccagggaagaggaaactttcccaagagacaaacttctggaggaaatacgaaccaga
gtcggtccttcttaa
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