Branchiostoma floridae (Florida lancelet): 118420852
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Entry
118420852 CDS
T01074
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118420852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118420852
03009 Ribosome biogenesis [BR:
bfo03009
]
118420852
03036 Chromosome and associated proteins [BR:
bfo03036
]
118420852
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
118420852
Messenger RNA biogenesis [BR:
bfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
118420852
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
RNase
118420852
Prokaryotic type
rRNA processing factors
118420852
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
118420852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DUF4763
DSRM_2
DicA_C
Takusan
DUF383
Motif
Other DBs
NCBI-GeneID:
118420852
NCBI-ProteinID:
XP_035683787
UniProt:
A0A9J7LJR0
LinkDB
All DBs
Position
8:13894988..13911952
Genome browser
AA seq
1545 aa
AA seq
DB search
MFPQGPGQGGQPPPFRYPGPPGMFPPGQGPGPRAGPPRGPHAGPPPRAGPPPDHRGPFLM
HQQGPFGGPRPGAPWGHPPGMHTGPPSSRPILRPPQFSPSQPRPDFGAPNPGFPPPRGPV
HQHRPPMRGPPPNQGPMLRGPPPSQGAGFRLPPPNQGPPIRVPPPNQGPLLRGPPPNQGP
PPKGPPTNQGPAFRGPPPNESPRMRSPHPPQPRQSSPFGFPAPPFSGPPPRGSSQPVTPP
TSAPRPIPPAKGWGSGDTGAEEWGTPPKGGASWEGLSKSWGDEAKPEKSETAWDVDKPGS
SKTSLGWGEPGPSKASWGVDEPGPSKASWGTEEPGPSKASWGMEESGPSKASWGTEESGP
SKASWGMDEPHKGSWEMDKPSATWGSETSRSSGRWDDGGWGDEKGKEKSSQTGRKRISSV
ASDERRQSERGEKRRRDYRDDDWGQWDPQSVDVPTPTTTETKEGSGDRDRDRERRPSTSK
GWGDSHPKESSRRKEHSRSPPRHSRSSSPAPKRSRWEHIDKEVVKEKEKPIWEWLSGGSE
QDKGEDDKTKNPPWVRCSPGDTYYDNCASEQFNGSSVVATDKLKALYKQFEEVLGLRQTG
AMDAKPPREDAPEPEPPPEDSESEESSSSSSSEESETEDTENDEEEAENIMEELRKKKAH
PDRLHEELWYNDPGEMNDGPLCRCSMKSRRTGIRHNIYPGEELIPKCDPYTNNANRLHHY
RITMSPFTNFLTDRPTVIQYDDHEYIFEGFSMLSHQKLQNIPDCKLIRFNIEYTIHLIEE
KMPENFCVHGLDMFSDFLFNDILELVDWDRWGPSRVDGKKKGCCRFHFMPRFVRNLPENG
KEVLAMHQVLQYLQRSNRPLVEASELALLLQLEEYEWQRFAEQTKNMIVTHPGMKPCSVR
VDQLDREQLNPDVISYPVIVHFGIRPAQLSYAGDPKYQKLWKSYLRLRHLLANSPKVRPQ
DRQKLFIRETELQKIRSKSEMRREVTVELSSEGFVRTGIRSDVCQHALLLPVLMHYLRYH
ACLNELDQLLGSKFEDRSLLELALTHPSHHLNFGMNPDHARNSLSNCGMRQPKYGDRRIH
HVHTRKKGINTLINIMSRMGHDEETPSLINHNERLEFLGDAVVEFLTSSHLYFMFPDLEE
GGLATYRTAIVQNQHLAVLAKKLRLDEFMLYAHGPDLCRESDLRHAMANCLEALIGAMYM
QQGLEETKKLFCRLLFSDEDLQDIWLNHPTHPLQQQEPEGDRHLIESSPVLKRLTEFESR
CGMEFKHVRLLARAFTHRTVGFNNLTLGHNQRLEFLGDSVMQMVSSEYLYKHFPDHHEGH
LSLLRSSLVNNRTQALVSQDLGMEEYIISSDKARQGKLSLRQKTLADLMEAFMGALYVDQ
GLEYVCVFMNVCFFPRLREFIMNQEWNDPKSQLQQCCLTLRTEGKEPDIPFYKILDKAGP
SHARKYTVAVYFKGERIGTGVGSSIQQAEMAAARDALKNYKFPQLAHQRRFMDKKYKHLR
RILDIEEERSGRRKEGGRDKERRKDRRREPKKKGRRPERGTSLQS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacagggtccaggccagggtggccagcccccacccttcagatatcccggaccc
ccagggatgttcccaccaggccaggggccaggtccaagagcaggtccccctaggggccca
catgcaggccctcctccaagagcagggccacccccagatcatcgtgggccgttcctgatg
catcagcaggggccgtttgggggccccaggcctggtgcaccatggggccatccacctggc
atgcacaccggtccaccttccagtcggcccatacttagaccgccacagttcagcccatca
caaccccggcctgactttggggcacccaatccaggattcccacctccaagaggaccagtt
catcaacacagaccgccaatgagaggacctccacccaatcaggggccaatgttgagagga
cctccacccagtcagggtgcaggatttagactgccaccacccaatcagggcccaccaata
agagtcccaccacccaatcagggccctctattgaggggaccaccacccaatcagggtcca
ccacccaaaggaccaccaaccaatcagggccctgcattcaggggccctccacccaatgag
agccctcgtatgagaagtcctcatcctcctcaacctagacaatcttctccatttggtttt
cctgctcctccattttcaggaccccctcctagaggatcttcccaacctgtaactccccca
actagtgcgcctcgtccgattcctcccgccaagggatggggcagtggggacacaggtgct
gaggagtgggggacacctcctaagggaggggcatcatgggaagggctgtccaagtcttgg
ggggatgaggcaaaaccggagaaaagtgagacggcatgggatgtggacaaacctggatca
agcaaaacgtcattgggttggggtgagccaggacccagcaaagcatcatggggagtagat
gaaccgggaccaagcaaagcatcatgggggactgaggagcctggaccaagcaaagcatcg
tgggggatggaggagtctggaccaagcaaagcatcatgggggacggaggagtctggacca
agcaaagcttcgtgggggatggatgaaccacataaaggttcatgggaaatggacaaacca
agcgcaacgtggggatcagagacttccaggtcttcaggcagatgggatgatgggggctgg
ggtgacgagaaggggaaagagaagtcctcgcaaactggaagaaaacgaatttcctctgtg
gcatctgatgagcgaaggcagagtgagcgtggtgaaaaaagacgtcgtgattacagagat
gatgattggggccagtgggatcctcagtcagtagatgtgccaactcctaccaccactgaa
actaaggaggggagtggtgacagggacagggacagggagagaagacccagcactagtaag
gggtggggggacagtcatcctaaggaaagttccagaaggaaggagcattcaaggtcccca
cccagacattccagatccagctcccctgcacccaagaggtcccgctgggaacacattgat
aaggaggttgtgaaggagaaggagaagccgatctgggagtggctgagtgggggctcggaa
caagacaagggagaagatgataaaaccaagaaccccccctgggtcaggtgctccccagga
gacacctattatgacaactgcgcctctgagcaatttaatggctcgagtgttgtggccaca
gacaagctgaaggctctgtacaaacagtttgaggaggtgctggggctgaggcagaccggg
gccatggatgccaagcccccgcgggaagacgcccccgagccagaaccgccgcccgaggac
tctgagtcagaagagagcagttcctccagcagcagcgaggaaagtgagacggaagacaca
gaaaatgatgaagaagaagcagagaacatcatggaggagctgcgtaagaagaaggctcac
cctgacagacttcacgaggagctgtggtacaacgatccaggagagatgaatgatggcccc
ctgtgccggtgcagtatgaaatccagacggacaggtatccgtcacaacatctacccagga
gaggagctgattcccaaatgtgacccctacaccaacaatgccaacagactgcaccactat
cggatcaccatgtcacctttcaccaacttcctgacagaccgtcccacagtaatccagtat
gacgaccatgagtacatctttgaggggttctccatgttgtctcaccagaaactacagaat
attcctgactgtaaactaatcagattcaatatcgagtacaccattcatctcattgaagaa
aagatgccagagaacttctgtgtgcatggactggacatgttctcagacttcctgtttaat
gacatcctggagctggtggactgggacagatggggtccttccagagtagatgggaagaag
aagggctgctgcaggttccacttcatgcctcgctttgtcagaaacttgcctgagaacgga
aaagaagtgctggcgatgcaccaggtcctgcagtacctccagaggagtaaccggccgctg
gtggaggcctcagagctggccctgctgctgcagctggaggagtacgagtggcagaggttt
gctgaacaaaccaagaacatgatcgtcacccatcctggaatgaagccctgttcagttcgt
gtggaccagttggacagagagcagctgaacccagatgtcatcagttaccctgtcatcgtt
cacttcggcatcagacctgcacagctcagctatgcaggggaccccaaataccaaaagttg
tggaagtcatacctgagattgcggcatcttctagcaaacagcccaaaagtcagaccccaa
gacagacagaaactctttattcgagagactgaattgcaaaagattcggtcaaagagcgag
atgagaagggaagtgactgttgagctgagtagtgaagggttcgtcaggacaggtatcagg
tctgatgtgtgccagcatgccctgttgcttcctgtactgatgcactacctgcggtaccac
gcctgtttgaatgagctggaccagctcctgggctccaagtttgaagacaggtccctgtta
gagcttgccctgactcatccttctcaccatctgaactttggtatgaatcctgaccatgcc
cgaaactccctatcaaactgtggtatgagacaaccaaagtatggggacagaagaattcac
catgtgcacactcgcaagaagggtatcaacacattgatcaacatcatgtccagaatgggc
catgatgaagaaacgccatctcttatcaaccacaatgagagactggagttcctgggtgat
gctgtggtggagtttctcaccagctcccatctttatttcatgttccctgacttggaggag
ggaggactggcaacatacagaacagccattgtgcaaaatcaacatttggctgttcttgca
aagaagttgcgactggatgagttcatgctgtacgcccacgggccagacctgtgccgtgag
tcggacctgcggcacgccatggccaactgtctggaggccctgatcggcgccatgtacatg
cagcagggcctggaggagaccaagaaactcttctgtagactgctcttcagcgatgaggac
cttcaagatatctggttgaaccacccaacacacccactacagcaacaagaaccagaggga
gacagacacctaattgaatcatcaccagttctaaagcggttgacagagtttgagagtcgg
tgtgggatggagttcaaacatgtccgcctgctagcccgagccttcacacacaggactgta
ggcttcaacaacctgactctaggccataaccagcgtctagaattcctgggtgactccgtg
atgcagatggtgtcatcagagtacctgtataaacacttccctgatcatcacgagggccat
ctgtctctcttgagaagttccctggtgaacaacaggacgcaggcgctggtgtctcaggac
ctgggtatggaggagtacatcatctccagtgacaaggcacgtcaggggaaactgtctctt
cggcagaaaacactggctgatctcatggaagccttcatgggtgctctgtatgtggaccag
ggtctggagtatgtttgtgtcttcatgaacgtctgcttctttccaaggctaagggagttc
atcatgaaccaggagtggaatgaccccaagtcccagcttcagcagtgctgcctgaccttg
aggacagagggcaaggagcctgacatacccttctacaagatcctggacaaggctggcccc
tcccatgccaggaagtacactgtggcagtctacttcaagggagagaggattggcacaggg
gtgggctccagcatacagcaggctgagatggcagcagcgagggacgctctcaagaactac
aagtttccccagctggcccaccagcgcaggttcatggacaagaagtacaaacatctccgc
cgtatcctggacatcgaggaagagaggagcgggaggaggaaggagggagggagggacaag
gagaggaggaaggacagaaggagagagccaaaaaagaaggggagaagaccagagaggggg
acaagtctgcaaagttga
DBGET
integrated database retrieval system
