Branchiostoma floridae (Florida lancelet): 118420871
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Entry
118420871 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: chondroadherin-like protein
KO
K18808
toll-like receptor 13
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bfo04054
]
118420871
Pattern recognition receptors [BR:
bfo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
118420871
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
TIR
TIR_2
LRR_9
LRR_EndoS
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
118420871
NCBI-ProteinID:
XP_035683815
UniProt:
A0A9J7LLB7
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All DBs
Position
8:15026680..15030617
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AA seq
969 aa
AA seq
DB search
MENPQKMHSMYNLLCLCMFLLSVKGDQVQLANPYGCEEWTTLDXTCTKLQLSKVPAGIPS
STLHLDLHDNSITQLQHQDFRALINLQSLDLRWNDIDHIQNATFAPLANLKTLNVSGNKI
HVSLLPQVVDFLPSLQHLEISLNWKWDDPVMLGNRTSFKGLRNLVSLNLGGNDIVDVKEN
SFDGLDKLQRLNLRNNLISHISEAAFHPLKELVHLDLSNNYLSDNILQLDKLWTSVLNLT
YLDLSENLLSFTHFPLAFQNLSLLHTLDLSRNELTNLTTDDFAPLFSTPLHTLQMERNSI
SHIDQGLLTSFTNLKSLKLQSNPILFSQLKEKLEGLQIEELTLGGSPDLDIITSETFPSL
PSLKHLTVSLLYEWSPSIKSSRLMEASFLNLPNLTQLSFEDYSLVTIEPYTFTGLEYLQR
LELGENKLTDFLAHVFDGLSSLTHLGLGNNGLTAVRAHYFHGLKNLFWLNLQNNEIMSIK
ETAFKGIESLQYLVLTSNDLSTVAGLQGLPNLRHLYLDSNNFTFLQAGSFSGLEKLTHLT
LAHNWINKIQKEAFSGLAMLKWLSLADNRLTNLTSWAFDGLSALEEIQLQHNVIMAVEPY
AFHGLEQMTKLNLKGHSIATIPDNAFMGLHNLTELDLSGNQIKTFGKKAFHGLGNLRVLQ
LQQNEITVLDENVFKQVLEHVRKIDIQDNPFFCDCNLLWFVFKANSQPLKVVGWNTNSFK
CAAPPKDQGKSLQILPSECELVFMPNLWLASLLSSLGIFLFVMTTFCVNYYSWRFRDLWF
RMRHRDRVVGVRDGDHRFVFDAFIAHHNEDRRWVERDLCRNLERSDNSPNYRLCLHQRDF
QAGIPIITNIRTAVDGSRKIVCVVTRSFLRSRWCQFEFQLAQHTMIEEGGGIRLVLVFLE
DIPRPLVQQYRHLQAVVDRDTYLEWPDDPRERPLFWRRLRAALGQPLEQEPNDHDSEPDQ
QGFMALMEV
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccacagaagatgcacagtatgtacaatttactgtgtctctgcatgtttcta
ctgtcagtcaagggggaccaagtacaattagcaaacccctatggctgtgaagagtggacc
accctggacnatacctgtaccaaactacaactgagcaaagtgccagctggcattccctca
tctactcttcatttggacctacatgacaacagtatcacacagctacaacatcaagacttt
agagcattgatcaaccttcagtccctagatttaaggtggaacgacatagaccatatccaa
aatgcaacttttgctccactagccaacttgaagaccctaaatgtgtcaggaaacaaaatc
catgtttctctgctacctcaggtagtggattttctgccttctctccaacaccttgagata
tccctcaactggaaatgggacgatccagtcatgctggggaataggaccagttttaaaggc
cttcgaaatctggtttctctaaacctgggtgggaatgacattgttgatgtaaaagagaac
tcctttgatggactagacaagctacagcgtctcaatcttaggaacaatctcatctcacat
atcagcgaagcagccttccaccccctcaaagagttagtacacctggatctctcaaacaac
tacctttcagacaacatcctacaactggacaagctttggacatcagtgttgaatctgaca
tatcttgacttgtctgaaaacctgctgtctttcacacacttcccgttagctttccaaaac
ttgtccctcctgcacaccctggacctctccaggaatgagctgacaaacctgacgacagat
gactttgcaccgctgttctccactccactacatacccttcagatggagcggaactctatc
agtcacatcgaccaggggcttctgacgtctttcacaaacctcaagtctctaaaactacag
tcgaatcccatcttgttttcccagctgaaagaaaaacttgaggggctacagatagaagag
ttgacactgggaggaagccctgatttggacatcatcacaagtgaaacatttccctcactt
ccttccctgaagcacctgacagtgagtctgctttatgaatggagcccttcaatcaaatca
agcagactgatggaggcaagcttcctcaacctgccaaatctgacacaactttccttcgag
gactattctcttgtcacaattgaaccctacacctttactggcctggaatatttacaaagg
cttgagttgggagaaaacaagctcacagacttcctagcacatgtgtttgatggtttgtcg
tccctcacacatctaggcctgggcaataatggcctcacagcagtcagggcacactacttt
cacggtctgaagaatctgttttggctgaatcttcagaacaatgaaatcatgtccatcaaa
gaaacagccttcaaaggcattgaaagccttcaatatcttgttctgacttcaaacgatctc
agcacagtggcaggcttacagggccttcctaatctacgtcatctttacttggacagcaat
aacttcacctttcttcaagcaggttccttcagcggactggagaagctaacacacctgact
ctcgctcataactggatcaacaagatacagaaggaagctttttctggccttgcaatgcta
aagtggctgagcttggcagataacagacttactaatctgacgtcctgggcattcgatggg
ctgtcagcattagaggaaatacagctacagcacaatgtgattatggctgttgaaccgtac
gcttttcatggcttagaacaaatgacaaaactcaacctgaaagggcacagcattgcaacg
atccctgacaatgccttcatgggtttacacaacttaactgagctggacctaagcggaaac
caaatcaagacatttgggaagaaagctttccatggtttaggtaacctaagagttttacag
ctgcagcaaaatgagattactgtcttggatgaaaatgtcttcaaacaggtcttagagcat
gtaaggaaaattgatatacaggacaatcctttcttctgtgattgcaacctgttatggttt
gttttcaaagcaaacagtcaaccactgaaggttgttggatggaatacaaactcctttaaa
tgtgctgcacctcccaaggaccaaggaaagtctctacaaatcctcccttctgagtgtgaa
cttgtgttcatgccaaacttatggctggccagcttactttcttccttagggatcttcctg
tttgtgatgaccaccttctgtgtgaactactacagctggaggttccgtgacctgtggttc
aggatgagacacagggacagggtggtgggagtccgggacggcgatcacaggttcgtcttt
gacgccttcatagcgcatcacaacgaggacagacggtgggttgagcgagacctgtgccga
aatctagaacgttctgataacagtccaaactaccgtctgtgtctccaccagcgagacttc
caggcaggcattcccatcatcaccaacatccgcacggctgtggacggcagcaggaagatc
gtgtgtgtcgtcaccaggagcttcctgcgcagccgctggtgtcagtttgagttccagctg
gcccagcacaccatgatcgaggagggaggggggatacggctcgtcctggtgttcctggag
gacatcccccgccccctggtgcagcagtaccgccacctgcaggctgtggtggacagggac
acgtacctggagtggcctgacgatccgagggagcggcccctgttctggaggaggctgcga
gctgcgttaggacagccgttagaacaggagcctaacgatcatgactctgagccagaccaa
cagggctttatggcattaatggaggtgtga
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