Branchiostoma floridae (Florida lancelet): 118420944
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Entry
118420944 CDS
T01074
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118420944
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118420944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
CHDNT
MlaC
AAA_21
Motif
Other DBs
NCBI-GeneID:
118420944
NCBI-ProteinID:
XP_035683932
UniProt:
A0A9J7LJC3
LinkDB
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Position
8:complement(21156..33172)
Genome browser
AA seq
1082 aa
AA seq
DB search
MASPTTGARSLQALPAATARLLSSTQVITSVFSVVKELVENSLDAQATSVDVKLESFGFD
RIVVSDNGSGISRADAEFMAQRHYTSKLSHQADLDSLETYGFRGEALGSLCAVADVTVTT
KTAADDFSMIYTLDRQGKITNSKPAHLGQGTTITVTNLFKNVPVRRQYYSAPKRRKEELK
RVEDIMMALGVIKPDVRFSLIHNKCTVWQKNKYPDHRTALRTVLGTGTMSLLLGVEHRSL
EPQVEVQGFLPKPGADPQTVTRATTDRSFVFFNERPVQMKGVEKLVRQYYHGSTSDGTSS
RHPIIFLSIRVPPAEIDPNVEPNKTKVLLHNNDSILSVIEEMLQTVYSSSDDANHNKATS
EEARDTTHNSSSSSDSNKQQNTLEDEQLSCAYYASSKSRNEDNLTNTEKIAPAHCKTLES
EEDTRREKVDNDHSSNVHVEVEIREEEPLGTLKNTTVNTTNMSSNSDSDITMGDSMLAEI
KTPDTSTVRPHRPADDTEISLFSINDSLLAGMDSQESLQQEDKLHEDSQRSFSISNSFLG
DLPTPSPAETGKKSEDGVSFNLLTQTSLSLVLSDEEKEENDKENYKERREESEGIAEISN
ILDSTNQTLRKDGIPPLPSLDSDNPTSANQKEDEIPTANEVSAKTWSEGRGLVNSVGEAV
EPVRLLVPGVTNQGQDQSAHTSVDKGSPGRKNTILKKEGHTTMYDLVGNKPVKKPQSAYS
FFIKDVRPTVCQENPEADFAEIARLIGQRWKQLTNQDRQRYEAMATRDQQRYQAHLKTLQ
ESESIASSDSPAPRKNKLSTKKRKLDPVSHQTLIDKMFQSQKSRKGNGENNQHTLKVVNV
SFSMTWLKEKVGKEVSNSSEADGTLRLIGWLLPHGVWVGVQGSEVVAVHQYRMQEALLYN
RLMETHVLPRQPLRAPVVLNESTTGGPLAWQTLQNLDSENTHPSPSRKICDPRLVNNGFD
VQLTNDEEGNIRAEVVAMTTCMPFYGVDDLKEILGIISRASSTTVSTSRPVKVIHYLKGE
AVRMVRSLSRTMSHDDVSDILRKKEKELPKCRTCLHSKPFIQTIYTLEEIYSQCSQEQSQ
PQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccgacgactggtgcgagaagcctgcaagcgttgcccgcggcgacggctcgc
ctgttgtccagcactcaggtcatcacgtccgtcttcagcgtggtgaaggaactggtggaa
aactcgctggacgctcaagccaccagtgtggatgtcaaactggagtcatttgggtttgac
aggatagtagtgagtgacaacggcagtgggatcagccgtgcagatgcagagttcatggct
cagcgacattacacgtccaaactgtcacaccaggcagacctggacagtctggagacttat
ggcttcaggggagaggcactgggatccctctgtgcagtagctgatgtgacggtcaccacg
aagactgcagctgacgacttcagcatgatctacacactggacaggcagggcaaaatcacc
aacagcaaacctgcacatctggggcaaggtacaaccataacagtcacaaacctgtttaag
aatgtcccggtgcgcagacagtactacagcgcccccaagcggcggaaggaggaactgaag
cgagtggaagacatcatgatggcattgggtgtcatcaagccagatgtcagattttcactc
atacacaacaagtgcacagtgtggcagaagaacaagtatcccgaccaccgtacagccctg
cggactgtgctgggtaccggcaccatgtcactactgctgggggtggaacacaggagtctg
gaaccacaggtagaggtgcagggattcctccctaagccgggagctgaccctcagaccgtc
acccgagccacgactgaccgctccttcgttttcttcaacgagaggcctgtccagatgaaa
ggggtggagaagctggtgcgtcagtattaccacggcagcacgtctgatggaacttcctca
cgacatcccataatattcctcagcatcagggtgcccccagcagagatagaccccaatgtg
gagcccaacaagacaaaagtcctcctgcacaacaatgattccattctgtccgttattgaa
gagatgctgcagactgtatacagctcttcagatgatgcaaaccacaacaaagctacgagc
gaagaagccagagacacgacacataacagttcaagttcctcggactccaacaaacagcaa
aacacactggaagatgaacagctgtcctgtgcatattatgcttcgagtaaaagtagaaat
gaagataatctgacaaacacagaaaagattgcacctgcccattgtaaaactcttgagtca
gaagaagatacaagaagagagaaagttgacaatgaccacagcagtaatgtacatgtagag
gttgaaataagggaagaagagcctttgggtacattaaaaaacacaactgttaatacgaca
aacatgagctcaaatagtgactctgacattacaatgggcgactctatgcttgctgaaatc
aagacccctgacacctccaccgtaaggccccataggccagcagacgatacagagatatcc
ttattctcaatcaacgactctttgctagcaggaatggactcacaggagtctctacaacaa
gaagacaaacttcatgaagattctcagaggagtttctccatttctaattctttcctcgga
gaccttccaactccaagccccgctgaaactggtaagaaaagtgaagacggcgttagtttt
aatcttctgactcaaacctccctcagtcttgtgcttagtgatgaagaaaaagaggaaaat
gacaaggaaaattacaaagaaagaagagaagagagtgagggtatagctgagatttcaaat
attttagattcaaccaatcagacgctcagaaaagatggaatccctcctctcccatcattg
gacagcgacaatcctacctcagccaatcagaaagaggatgagattccaacagccaatgag
gtttcagctaagacgtggagtgaagggagaggattggtcaactctgttggagaggctgta
gaaccagtgagactattggtccctggagtgaccaatcagggacaagatcagtcagcacac
acaagtgttgacaagggaagcccaggaaggaaaaacaccatactgaaaaaggaaggccat
acgacaatgtatgaccttgttgggaacaaaccagtgaagaagccacagtcagcttacagt
ttcttcatcaaggatgtcaggcctactgtgtgccaagagaacccagaagctgactttgca
gaaattgctcggctcattggtcagcgttggaagcagctaaccaatcaggacagacaacgc
tacgaagccatggcaaccagagatcaacagagataccaggcacatctaaagacactccaa
gaaagtgaaagtattgcatcttcagattcacctgcgccaagaaagaacaagctaagtact
aagaaaaggaagttggatcctgtttctcaccaaaccctcatcgacaaaatgtttcagtcc
caaaagtcaaggaagggaaatggagaaaacaatcaacacactttgaaagtggtgaatgta
agttttagtatgacgtggttgaaagaaaaagtagggaaagaagtttccaacagttctgag
gcagatggaacgcttcgtctgattggctggttgttgccacatggtgtatgggtcggagtg
caagggtcagaggtcgttgcagttcaccagtacaggatgcaggaggcgctgctgtacaac
aggctgatggagactcatgtgttgcctaggcaaccgctcagggcacctgtggttctgaac
gaaagcacaacaggagggcctctggcatggcaaaccctacagaacttggacagtgaaaac
acccaccctagcccgtctaggaagatctgtgacccaagactggttaacaatgggttcgat
gtccagctgaccaatgatgaggagggcaacatcagggcggaggtcgttgccatgacaaca
tgcatgcccttttatggggttgacgatttgaaggaaatccttggcatcatcagtagagcc
agtagcacaacagtgtccaccagcagaccagttaaagtcattcactacctaaaaggagag
gcagtgcgcatggttcgtagcctgtccagaaccatgtcacatgacgacgtgagtgacatc
cttaggaagaaggaaaaggaactgcccaagtgtcggacatgtctccacagtaaacccttt
atacagactatctacacactggaggagatatactcacagtgtagtcaggaacagagtcag
ccacagtag
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integrated database retrieval system
