Branchiostoma floridae (Florida lancelet): 118421134
Help
Entry
118421134 CDS
T01074
Name
(RefSeq) lactadherin-like
KO
K20053
very low-density lipoprotein receptor
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118421134
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118421134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
Ldl_recept_a
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
118421134
NCBI-ProteinID:
XP_035684187
UniProt:
A0A9J7LJV3
LinkDB
All DBs
Position
8:complement(3864550..3893555)
Genome browser
AA seq
604 aa
AA seq
DB search
MAVGLLLLICLLFADHAFPQIAGAEEECSSPEHVTCENTGRCVFSCDGKDECTDGSDEMD
CWSKDCPIPDFKYVRCEISGACIHKGYVCDDGSDERDCPPFWECLLSIDSKCEPSCPSIP
DRYRCDGVVNCLDGSDESDCVCTNAEFRCETSGRCVAPSGVCDGVPNCDDASDELECQTC
AERGMWQCNNGWCINIASVCDGDKDCSTGEDEENCKAPCNGLQLECDGGCLPKYRACDGL
DDCTNGEDEINCTVGDVPPPGFPLGLASRYIPDFFISASSEFKPEFAASQARHTPPTTPG
YCWVPSSVVDQWLKVYFGKTTDITGVVISGGGSNWDLGSWVTSFTLAFSMDGDWWTDYEG
SNNTVQVFQGNRDRYNKASRPLPTPVTSRYICIFPIGYEGWVAMTLEVYVTNDENTWLTK
EEYVPLGVGLDPSNPEAVPKIPDLHITASSRTDNILPWEARLNYGKLPGMSWATNFFQED
PDPWLQIKHDKVCAVAGVITQGAYFMKLWVTSYKLAFSVNGQTWTPYRNRTGDSDAEPMV
FIGNSDSYRYARNLLDNPVLALFTRFYPLSYRIMVAMRVEVLVIDALHVKRFYKKSAVWN
GPPS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcggcttgcttctgctgatatgcctgctgttcgccgaccacgcctttcctcag
attgccggtgctgaagaagagtgttcttcaccagaacatgtcacgtgtgaaaataccgga
cggtgtgtcttttcatgtgacggtaaagatgaatgcacagacggttcagatgaaatggat
tgctggagcaaggactgtccaatacctgacttcaaatatgtcaggtgtgagattagcgga
gcctgtatccataaaggatacgtgtgcgatgatggctcggacgagagagattgtccacca
ttctgggagtgccttttgtctatcgattccaagtgtgaacccagttgtccttccatccct
gaccggtaccgctgcgatggcgtcgttaactgcctcgacgggtccgatgaaagtgattgt
gtatgcaccaatgccgagttccgatgtgaaactagcggcagatgtgtggcaccatcggga
gtgtgcgacggggtcccaaactgtgacgacgcgtcagacgaactggaatgtcagacctgt
gcagaacggggcatgtggcagtgtaacaacggttggtgcatcaatatcgcgtctgtgtgt
gacggggacaaggactgctctactggggaagacgaagaaaactgtaaagctccctgcaat
ggactccaattggagtgtgacgggggatgcctgccgaaataccgcgcctgtgacgggctg
gacgattgtactaacggggaggacgagatcaactgtacagtcggagacgtcccacctcct
gggttcccgcttgggttggcaagtcggtacattcctgattttttcatctctgccagttcc
gagttcaagccggagttcgccgcctcccaggctcggcacacgcctccgactacaccaggg
tactgctgggtaccaagttctgtggtcgaccaatggcttaaggtttactttggtaaaacg
actgacatcaccggcgtggtcatcagtggaggcggctcgaactgggacctgggtagctgg
gtgacgtcattcactttagccttcagcatggacggcgattggtggacagattacgaaggc
agcaacaacaccgtgcaggttttccaaggaaaccgtgaccgttacaacaaagcgagtcgt
cctcttcctactcctgtgacgtcacgctacatttgcatattcccgataggctatgagggc
tgggttgccatgacgctggaagtgtacgtcacaaatgacgaaaacacttggttaactaaa
gaggagtacgtcccattgggagtcggactagatccgagcaatcccgaggcggttccgaag
attcccgatctccacatcaccgcttcatcacgaactgacaacatattgccttgggaggca
cgtctgaattacgggaagcttccgggtatgtcgtgggctacgaatttctttcaggaggac
ccggacccatggctacagattaagcacgacaaagtgtgcgcggttgccggggtgatcacc
cagggggcttacttcatgaaattatgggtcacttcctacaaactggcgttctcagtgaat
ggtcaaacatggacaccgtacagaaaccgcaccggtgacagcgacgccgaaccgatggtt
ttcataggaaacagcgacagctatcgatatgcccgcaatctgttggacaacccggttctt
gcgctcttcacccggttctatccgctctcctaccgtattatggtagccatgagggtggag
gttcttgtcatagatgcattgcatgtgaagaggttctacaagaagagtgcggtctggaat
ggacccccaagttag
DBGET
integrated database retrieval system
