Branchiostoma floridae (Florida lancelet): 118421167
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Entry
118421167 CDS
T01074
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfo02000
]
118421167
03037 Cilium and associated proteins [BR:
bfo03037
]
118421167
Transporters [BR:
bfo02000
]
Other transporters
Pores ion channels [TC:
1
]
118421167
Cilium and associated proteins [BR:
bfo03037
]
Other cilia and associated proteins
Stereociliary proteins
118421167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
118421167
NCBI-ProteinID:
XP_035684221
UniProt:
A0A9J7LJS7
LinkDB
All DBs
Position
8:complement(7129511..7147283)
Genome browser
AA seq
928 aa
AA seq
DB search
MQESRRRNRLDRRRVRRMSRVEEGVLKKLLPKDEGSDWDSDDVLKPGASSDEEPTEEEIL
ENIQRQKEIIEAIRKQPWRMKKKLKTLKVAQDYLEKYEGKLSKSRGYQEATERVWKKIRR
ELANFASFFIPWDTRIKTIESYFGSVVASYFIFLRWLFWINIALSILMLSFVVLPELLVG
LEYGSLPRKAVPEPEIKLYTCGYLKFSVLFYGYYSNQKSIGSGYQLPLAYFLTGIGMFVY
SFVVILRKMAKNSRMAKLSTEDDQFTFCWKVFCGWDYLIGQSDTADNKFAAISTGIREAI
LEEEEKNKDERSMKEKCLILILRILANFMIMILLAGSGYAIQLVVERSEQFEKMDQALLN
WWEQNEVSIVVSIITIVFPVFFDLIGQMEKYHPRVMLQWQLARIMVLNLGNLYTLMIALF
KKVNNLAEEARKARVALDTLHQVSENASWALQNVTASGMIQEILQLDEHMLESTNDTQVV
DALTRLAGIKEQCWETIVGQEMYKLSVFDMIATLVTTIIVDFLRGLFVRFANYCWCWDLE
AKIPGYGEFGVAENVLHLIYNQGMIWMGAFFAPCLPVLNVLKLIALMYLRSWAVIMCNTP
HQRVFRASRSNNFYFVLLLIMLFLSMLPTGYVMVSIEPSRNCGPFSGRRRMFDIIPDTVQ
EQFPAWLTTVLSYMSTAGVILPVFMLLVMAIYYLQSLVRSYKEANNDLRIQLQYERTEGK
KKVYEMSAAKNDQSDGSGSSHVRSRHKAQVPNGRLPPGTPLPRFGPKAGSRGPGGSVGFQ
RAFSPQVRFLPVRQYVNPYEGVILTPHHQQMVQSQPHQRFRRLQYTPQPGTRLVAVPMGH
TAGRGTQPHQQPHQQPHQQPHPQSHPQPPPGGFGQQRRMTTGRLSARGAASILVPEGYQL
VQVHADAGDEAASSQETSFVDEDFDSIG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagagccgccggaggaacagactggaccggcggagggttcggaggatgagccgg
gtggaggagggtgtgctgaagaaactgctaccaaaggacgaaggaagtgactgggacagt
gatgacgtattaaaacctggtgctagtagcgatgaagaaccgacagaagaagaaatcctg
gagaacatccagagacagaaggagatcatagaagccatccgcaaacagccctggaggatg
aagaaaaagctcaagacactcaaagttgcccaggactaccttgaaaaatacgaggggaaa
ctttcaaagagcaggggataccaagaggcaactgagagggtttggaagaaaattaggaga
gaacttgcgaactttgcatcattctttatcccttgggacaccaggataaaaacgatagaa
agttactttggatcggtggtggcatcatatttcattttcctgcggtggctgttctggata
aacatcgccctgtccattttgatgctgtcatttgtggttctcccagagcttctcgtgggt
ttagagtacggttccttaccaaggaaggcggtaccagaaccagaaattaaactatatacg
tgtggctatctgaagttctccgtgctgttctacggttactatagtaaccagaagtccatc
ggcagtgggtaccagctaccgctggcgtatttcctgacggggataggcatgtttgtctac
agcttcgtcgtcattctcagaaaaatggcgaagaactcccgcatggcgaagctgtccact
gaagatgaccagttcacgttctgctggaaggtgttctgtggctgggattacctcatcgga
cagtcagacaccgctgataacaaatttgctgccatctcaactggaatcagggaggccatt
cttgaagaagaggaaaagaataaagacgaaagaagtatgaaggaaaaatgcctgatcctg
atcctccggatcctggctaacttcatgatcatgatcctactcgctggaagcggctacgcg
atccagctggtggtggagagatccgagcagttcgagaagatggatcaggcgctcctcaac
tggtgggaacagaatgaggtttccatagtagtgtcgatcatcaccatagtgttccctgtg
ttcttcgacctgattggtcagatggagaagtaccatccccgcgtcatgctacagtggcaa
ctggccaggatcatggtcctgaacttgggtaacctctacacgctgatgattgcactcttc
aagaaggtcaacaacctggccgaagaggcaagaaaagcaagggtggctctggacactttg
caccaggtgtccgagaacgccagctgggctctccagaacgtgacggcatcaggtatgatt
caggagatcctacagcttgacgagcacatgctggagagcacgaacgacacgcaggtggtg
gacgctctcaccagactggctgggatcaaggagcaatgctgggaaacaatcgtggggcag
gagatgtacaaattgtccgtctttgacatgatcgccaccttggtgactaccatcatagtg
gacttcctccgcggactgtttgtgaggtttgctaactattgttggtgctgggacctggaa
gccaaaattcccggctatggcgagttcggcgttgctgagaatgtgctacacctcatctac
aatcaagggatgatctggatgggggcgtttttcgcgccttgcctgcctgtcctgaacgtg
ctgaagttgatagcgctgatgtacctgcgcagctgggcagtcatcatgtgtaacactcct
caccagcgggtcttccgcgcctccaggtccaacaacttctacttcgtcctgctgctcatc
atgttgttcctgagcatgctccccacgggctacgtcatggtgtctatagaaccttccagg
aactgtggaccgtttagtggccggcggcgcatgtttgacatcatcccagacacggtacag
gaacagttcccggcctggctcaccactgtcctcagctacatgagcactgctggggtcata
ctgcccgtcttcatgctactcgtaatggcgatatactacctacaatctttggttcgatcg
tacaaagaggccaacaacgatctaaggatacaactgcaatacgaaaggacagaaggaaaa
aagaaagtttacgaaatgtcggcggctaagaacgaccagagcgacggctctggctccagc
cacgtcaggtcccgacacaaggctcaggtccctaacggccgccttcccccgggaacacca
ctgccgaggttcgggcccaaggccgggtcccgagggcccggagggtctgtcgggttccaa
cgggcgttctctccacaagtcaggttccttcccgtgcggcagtacgtcaacccgtacgaa
ggcgtgatcctgaccccccaccaccagcagatggtacagtcccagccgcaccagcggttc
cgccgcctgcagtacaccccccagcccggcaccaggctcgtggccgtccccatgggacac
acggcgggcaggggcacacaaccgcaccaacaaccgcaccaacaaccgcaccaacaaccg
catcctcaatctcacccacaaccgccccctggcggattcggacagcaaaggagaatgacg
acagggaggctttccgcacgaggagcggcttccattctcgttcccgagggctatcagttg
gtacaggtccatgcggacgctggagacgaggctgcctcctcccaggagacctcattcgta
gacgaggacttcgacagcatcggttag
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