Branchiostoma floridae (Florida lancelet): 118421243
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Entry
118421243 CDS
T01074
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118421243
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118421243
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118421243
Protein phosphatases and associated proteins [BR:
bfo01009
]
HAD phosphatases
Fcp/Scp phosphatases
118421243
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118421243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
118421243
NCBI-ProteinID:
XP_035684334
UniProt:
A0A9J7MZB9
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Position
8:complement(20769758..20776946)
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AA seq
767 aa
AA seq
DB search
MAEEETFANFLQATGGENAKQKKKTGGESEEDRKSAHKSKLQKEQSKAELEAAIRKRVDC
EEKAFRVVERLLDNPVDTDFFVNCAQYIEPSHYADVLVERSIVGQCGYPVCSNKLPKTKP
KQQYHIDTRHNKVYDITERKNFCSNWCYKASQFYKNQLFTSPVWARDKEKPVPVRLLQME
GSSEVTSESCSSQGDHQGSTGKEDSTEENLQTTQVHLKQECTEDSTTLEHTKETDDSGES
SGQGAEVKFSKLSLSDSVVKHDNGVGKEDREDASETYDKTMADRDSSKEDILDVEKKVSQ
PKTVTVNEGQEEENQTMTEGRQEDTSGGVEKIPSGEGEDVVLQTAPAAVVQTRHDTAAPM
TQVSVAQTVFKSLMEWRTEMTFKFLYGGHVEVNLVLPEVLRFTTQEELRAAAGTTQEQDA
SLQHHDNQHHGNQHHDNQHHGNQHHDNQHHGNQHQGNQHHGNQQHGNQQHGNQQHGNQQH
GNQHHGNKHHDNQHHGNQHHGNHIHGNKHHGNNTSQQMADENVVKAEHSKKVRFQEDQKD
FTQPLSICIPEDPCQNDEEVQLGSLQGKDPKESQDGHVYQGGPDLDPCDTGPATRPLPDL
ATLRRDAALFQMRVQEFYRGGTQLPVSQEEGLEVTEKRIEDDDEHPVILPPVDSQAQRAL
QQKILLDRLNRVFPSVLAPLRLSVRDFSTELNLLVKTFRLTSDNIVFRPAELKLLAVVLI
HILATKVQVIMQSLYCPETAQFLTSLLRPWRLDLQDLDALVSVMRLG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagagacatttgcgaactttctccaagcaactgggggagaaaatgcgaag
cagaagaaaaagacaggcggcgaaagtgaggaggaccgcaagtctgcacataagtccaaa
ctgcaaaaggaacagagcaaagcagagcttgaggcagccatacgaaagcgggtagactgt
gaggagaaagccttcagggttgtggagaggctgttggacaaccctgtagacacagacttc
tttgtcaactgtgcccagtacattgagcccagccactatgcagatgtgctggtggaacgt
tccattgtcggccagtgtgggtatcctgtctgcagcaacaaactacccaagaccaagccc
aagcagcagtatcatattgacaccaggcataataaagtctatgacatcacagaaagaaag
aatttctgcagtaactggtgctacaaggcctcccagttctacaagaaccaacttttcaca
tcgcctgtctgggcaagggacaaggaaaaacctgtgcctgtcaggctgcttcagatggag
gggtcatctgaggtcacttctgagtcatgttccagtcaaggggatcatcaaggttcaaca
ggtaaagaggactcaactgaagaaaacttgcaaactactcaagtacatctgaaacaggaa
tgtacagaggacagcactacgctggagcataccaaagaaacagatgattctggggaaagt
tctggtcaaggtgcagaagtaaagttctcgaaactgtcactttcagactctgtagtaaaa
catgacaatggtgttggtaaggaggacagggaagatgcaagtgagacatatgataagaca
atggcagatagagacagttcaaaggaggacatattggatgttgaaaagaaggtcagtcaa
ccaaaaacagttactgttaatgaaggccaggaggaggaaaatcagacaatgacagagggg
agacaagaagacacatcaggaggggtggagaagataccctcaggtgagggagaagacgtt
gtactgcagacagccccagctgctgtggtccaaaccagacatgacacagctgcacctatg
acacaggtgtctgtcgctcagactgtcttcaagtccttaatggagtggagaactgagatg
accttcaagtttctgtatggcggtcacgtggaggtcaacttggtccttcctgaggtcttg
aggttcacaactcaggaagagttaagggctgccgcagggacaacacaagagcaggatgct
tctctacaacaccatgacaaccaacaccatggcaaccaacaccatgacaaccaacaccat
ggcaaccaacaccatgacaaccaacaccatggcaaccaacaccaaggcaaccagcaccat
ggcaaccaacagcatggcaaccaacagcatggcaaccaacagcatggcaaccaacagcat
ggcaaccaacaccatggcaacaaacaccatgataaccaacaccatggcaaccaacaccat
ggcaaccatatccatggcaacaagcaccatggcaacaacacatctcaacagatggcagat
gagaatgttgttaaagcagaacactccaagaaagttagatttcaggaagaccagaaagac
ttcacccagccactatccatctgtattcccgaggacccctgtcagaatgatgaggaagtg
cagctaggatctctgcagggaaaagaccccaaagaatcacaagacggccatgtgtaccag
ggtggtcctgaccttgacccctgtgacacggggcccgcgacccgacccctgcctgacctg
gcgaccctgcggcgcgacgcggccctgttccagatgagggttcaggagttctacagaggg
gggacacagctgcctgtcagtcaggaggaggggttagaggtcacggagaagaggattgaa
gatgatgatgagcatccagttatcttgcccccagtggactcccaggcccagagagctctg
caacagaagatcctattggacaggctgaacagggtgttcccctcagtgttggcccccctg
cgactgagtgtgagagacttttctactgaactcaacctgctggtcaagacattcaggttg
accagtgacaacatcgtcttcagacctgctgagttgaagcttctggctgttgtactaatc
cacatcttggccactaaggttcaggtgatcatgcagagtctgtactgtcctgagactgct
cagttcctgacgtctctcctgcgcccatggagactggacttacaggacctggacgcacta
gtgtctgtcatgagactgggatga
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