Branchiostoma floridae (Florida lancelet): 118421316
Help
Entry
118421316 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like
KO
K11491
condensin-2 complex subunit D3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118421316
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
118421316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Adaptin_N
Cnd3
HDV_ag
Motif
Other DBs
NCBI-GeneID:
118421316
NCBI-ProteinID:
XP_035684495
UniProt:
A0A9J7LMI0
LinkDB
All DBs
Position
1:complement(28939581..28963899)
Genome browser
AA seq
1664 aa
AA seq
DB search
MSNFPDVCVRLGIGALQKDWVDQVWDCDFTICDPPAEECGISIDSRYNEQLLRAVQLLAR
YSNEENAEHGGQDFWSLLTDHDLSYRNIIALAFYSIYTGQQRVASAIEKEAACLATSLYF
NLLQVPGSGAYGTFHAVLFEKAMNVLKHWPQAGGNKRKHRSDGAEPQGKKPPKAPRRGGQ
PQGREEDMEQDGDRDGDNADEDDSDDEEVVLSAQEMTKIKQLLIGCLKDLIRLLRCGHFS
LKERQDSTQHALETLVFLTRVELTNEELSYSTDMNLSHMASLTQLAYILLLLMMLLLLFX
TLVSLTRVELTNEELSYSTDMNLGHVSSLTQLAYMATSILSTGAHGEVTAVVTCLFRLLL
PNVLMMGEGGSVAPNAIPQALQVISSQAVGYACHLARQGGEAVMPVYRILLQHSCWRVPD
KAEYRTRVSQSVVKMLQALPTPAYASFLEWLYRFSRSTKIGHRTFGLDMALALLPEPERE
IDDNVQDDHFIYLTRMFLLEKMIMARCSDVAPNVRGRALSCLSQCISSENPSIVLLFQDF
FASTLTKTPGVQRSNTPLTGNSTALTPLGMTPSPGASTLQGESPAPRDVSFGSTAPGGTQ
NLFTMLGERLNDDKVGVRKAALQAFESLVSISPTPPSVKEVEIIYQRCMDVSLSVRKQAL
QSLTTVLHKNPTLPHVHKLWLEGVVPAVMDRETTCSEKSLELLEDTILEQIVDVGKSQNE
DSDLAWNLLKVIAGIEGQELRRYLGKACNIWSRQGKLTSRLLKALSTHVSSDHTEAAWMM
MALVAKYCPKMDYSMVLDNWQGYRDGRGVFSKDTVSSILQVMGSIAGNIPKHKINEIMAD
LKKLLRGYSCDPGMIKDLVWTLEKLTKGCSKEPEEARAMMDEWATELLRRSEEYLSSLVL
NEDLNTANLDVMAVVRHLFTVGEVAQLCPAKTSKRIILMVQSFLVDNTKLDELPSSQGTQ
LSQMPGSQLSQMPLSQAAAQLSQMPSQMSQIPLSQLQGPALPPTIRAHAILTIGKLCLQH
DDVAKKCVPFLAHELETSPHIPIRNNVMVILCDLIKLYSTYIDHHIPAIAACLKDESPLI
RNQTLIMLTQLLQEDFMKWKGTLFFRFVSVLVDPDEDTRKSAEFCLVHLLSERQPGMYFN
NFVQCVYHLNSYQHHPVYNKFNESERERKMFSLAGEANREKRRTIYRFLLEHMTDENRFN
LIGKLCSEVLEGFVDNVLPLNAETSQILQDTLSILSCKEIKLASLKANAEEDALNEGDAA
GAAFHRATNKFLTQVVKKNMIENIVPIIIALKHQLEAKRSPLLRSLMVYLKEVMKDYRNE
VKDIMAADKQLASEIEFDLRRFDEQQREQEEERQRRKSVGTPGAAATPAAGGPTPTVPGS
GSGAPGTPKRHPGPEPGAVPRTPAAALGARQLNVLAIINSARKNMSARRAARVADQPDGG
DGSPNANKASSPANQPQQPDTQQPLHSPNVDTPSVTQNALQPTNIDTPTTPPGTPGKPQS
PSPKTPARPSDASPLPPPAQPRTPLRSAGFATPERTRQPCRAISTPDNTIQDITFQAPFD
VSAITPIVASGRPRRVPSGSERSPSLDTVADTDGAEVTEKMAVICLKHPEAVEKPVEWKV
VTPNKTRQRTRSRPQSSSAEETENQPGGSTRRSARTRTPRTSNS
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaactttccagacgtatgcgtcaggctgggaataggagcattacagaaggactgg
gtagaccaggtttgggactgtgacttcaccatctgtgaccctcccgcggaggagtgcggc
atcagcatcgacagtcgctacaacgagcagcttctccgtgccgtgcagcttctggcacga
tattcaaacgaggaaaacgccgaacacggtggacaggacttctggagcctcctgactgac
catgacctctcctatcgtaacatcatcgctctggccttctactctatttatacaggccag
cagagagtagccagtgctatagagaaggaggcagcctgtctggccacaagtctgtacttc
aacctgcttcaagtgccaggtagtggtgcgtacggtacgttccacgccgtgctgtttgag
aaggccatgaacgtactgaagcactggccgcaagccggagggaacaagcgcaagcacagg
agcgacggcgctgaaccgcaggggaagaaaccaccgaaggcacccaggagggggggtcag
ccccagggcagggaggaggatatggaacaggatggggacagagatggggataatgcagat
gaagatgacagtgatgatgaggaggtggtcctctccgcccaggagatgaccaagatcaaa
cagctcctgattggctgcctgaaggacctgatccgcctcctccgctgcggacacttctct
ctcaaggagcgacaggacagtacccagcatgcactggagaccctggtgttcctgacgaga
gttgagctgaccaatgaggagttgagctacagtacggacatgaacctgagccacatggcg
tccctcacacagctggcgtacatcttgttgttgttgatgatgttgttgttgttgttttag
accctggtttccctgacgagagtagagctgaccaatgaggagttgagctacagtacggac
atgaacctgggccatgtgtcgtccctcacacagctggcgtacatggctacgagtatcctc
tctactggagcacatggggaggttactgcagtagtgacctgcctattccgtctgctgctc
cccaatgtgctgatgatgggggaggggggcagtgtggcaccaaacgctatcccacaggcc
ttgcaagtcatcagttcacaggctgttgggtatgcgtgtcacctggcccggcagggtggt
gaggcagtgatgccggtgtaccggatactcctgcagcactcctgctggagggtacctgac
aaggctgagtaccgaacgcgggtgtcccagagtgtggtgaaaatgttacaggcactcccc
acgccagcgtacgcaagctttctggaatggctttaccgattttccaggtctaccaagatc
ggccaccgtacgttcggactggacatggcgctggccttgcttccggagccagagcgcgag
attgacgataatgttcaggacgaccacttcatctacctcacgcgcatgttcctgttggag
aagatgattatggccaggtgttcagacgtggcccccaatgttcgtggccgcgccctgagc
tgcctgtcccagtgtatctcctcagagaaccccagcatcgtactgctgttccaagacttc
tttgcctcgaccctcaccaaaacccccggggtacaacggtccaacactccgctcacaggg
aattccactgcactgactcccttggggatgaccccctcccctggtgccagtaccctgcag
ggtgagtcccctgcccccagggatgtctcgttcggtagcactgcacctggcgggacacag
aacttgttcaccatgctgggggaacgtttgaatgatgacaaggtcggagttcgcaaggcg
gctcttcaggcattcgagagccttgtgtcgatcagtccgacccctccctcagtgaaggag
gtggagattatctaccagcgctgcatggacgtgtccctgtctgtccggaagcaggcgctg
cagtccctcaccacggtactgcacaagaaccccaccctcccccacgtgcacaaactctgg
ctggagggggtggtgcctgccgtcatggacagggagacaacctgctccgagaaaagtctg
gagcttctagaggacaccatcctggaacagattgttgatgttggaaaatcccagaacgaa
gactccgaccttgcctggaacttactcaaggtcatagctggtattgagggtcaggagctc
aggcgctacctcgggaaagcctgtaacatctggtctcgtcaggggaagctgacttctaga
cttttaaaggccctgagtactcatgtcagctccgaccatacagaggctgcctggatgatg
atggcattagttgctaagtactgccccaagatggactactccatggtgctggataactgg
caagggtaccgtgacgggcgtggcgtcttcagcaaggacaccgtgtcctccatactacag
gtcatgggcagcatagcaggcaacatccccaagcacaagatcaatgaaatcatggctgac
ttgaagaaactgctccgaggatactcctgtgaccccggaatgatcaaggacctggtctgg
accttggagaaactgaccaagggctgctccaaggagcccgaggaggccagggccatgatg
gacgagtgggccacagaacttctgcggcgctcggaggaatacctgtccagtctagtgctg
aatgaagacctgaacactgcaaacttggacgtcatggcagtcgtccgccacctgttcact
gtgggcgaggttgcccagctgtgtccggccaagacgtccaaacggatcatcctgatggtc
cagtccttcctggtggacaacaccaagctggatgagctcccctccagccagggaacgcag
ctgtctcagatgccggggtcgcagctgtcccagatgccgctctcacaggcggcggcgcag
ctgtcccagatgccatctcagatgtcccagataccactctcacagctgcagggccctgca
ctgcctcctaccatcagggcacatgccatcctcaccatcgggaaactgtgtctacagcac
gatgacgtcgctaagaagtgcgtgcccttcctggcgcacgagctggagacgtccccgcac
attcccatccgtaacaacgtgatggtgatcctgtgtgatctcatcaagctgtattccacc
tacatcgaccaccacatccccgccatcgcggcatgtctgaaggacgagagcccgttgatt
cggaaccagaccctcatcatgctgacccagctactgcaggaagacttcatgaagtggaag
ggcaccctgttcttcaggtttgtaagtgttttggtggacccagacgaagatacccgcaag
tctgcagagttctgcctggtgcacctgttgtctgaaaggcagcctggcatgtacttcaac
aactttgtccagtgtgtgtaccacctgaactcgtaccagcaccatcccgtctataacaag
tttaacgagtcggagcgcgagaggaagatgttctccctggccggggaggcaaatcgcgag
aagcgccggacgatctaccgcttcctgttggagcacatgacggacgaaaaccgcttcaac
ctgattgggaagctctgttccgaggtgctggaagggtttgtagacaacgtgctgcccctg
aatgcagagacgagtcagatcctacaggacaccctgtctatcctgtcctgtaaggagatc
aagctggcctccctcaaggccaatgctgaggaggacgctctgaacgagggggatgcagca
ggggccgccttccatagggcaactaataagttcctcactcaggtggtgaagaagaacatg
atagagaacatcgtgccaatcatcatcgccctgaagcaccagctggaggccaagcgctcg
ccgcttctgcgcagcctcatggtctacctcaaggaggtcatgaaggactatcgcaacgag
gtcaaagatatcatggcagctgataaacagctggcgagtgagatcgagttcgacctgcga
cgttttgacgaacagcagcgagaacaggaggaggagcgacagcgccgtaaatctgtggga
actcccggtgctgctgccacccctgcggcgggaggtcccactccaactgtccctggaagt
ggttccggtgctccaggcaccccaaagagacatcctggtccggagccgggcgccgttcca
cgaacgccagctgctgctctcggcgccaggcagctgaacgtgctggcgatcatcaactcc
gccaggaagaatatgtctgcccgcagggccgcacgtgtcgccgatcagcccgacggtggg
gacggctcccccaatgctaacaaagcctcctcccctgctaaccaacctcagcaacctgat
acccagcaacctttgcattcacctaacgttgacaccccgtctgtcacccagaatgctttg
cagccaactaacattgataccccaactacacctccaggcacccccggcaaaccccagtct
ccgtctcccaaaacccccgctcgccctagtgacgcctcccccctacctccccccgcacag
cctcgcacccccctgaggtctgcagggtttgccacgcccgagaggaccaggcagccgtgt
cgggctatcagtactccagacaacaccatacaggacatcaccttccaggctccatttgat
gtcagtgccatcacaccgatcgtcgccagcggcagaccccgtagagtcccgtccgggtct
gaacgtagtccaagtctggacactgtggctgacacggacggggccgaggtgacggaaaag
atggccgtcatttgtctgaagcacccggaggctgtcgaaaaacctgtggagtggaaggtc
gtgacacctaacaagacaaggcagcgaacccgaagccgtccccagagcagcagtgcagag
gagacagagaaccagccggggggttccacaaggagaagtgctcggaccaggactcccaga
acatccaactcataa
DBGET
integrated database retrieval system
