Branchiostoma floridae (Florida lancelet): 118421428
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Entry
118421428 CDS
T01074
Name
(RefSeq) LIM/homeobox protein Lhx3-like isoform X1
KO
K09374
LIM homeobox protein 3/4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118421428
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
118421428
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
MRP-L20
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
118421428
NCBI-ProteinID:
XP_035684600
UniProt:
A0A9J7LMQ4
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Position
8:4317021..4338039
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AA seq
419 aa
AA seq
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MSTLTAGPSPVTITANTAASPPAPSNGAPTGGSTAPTPEVLYALLANDKSLEANIPKCAG
CEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFRRFGTKCAGC
GQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDYEAAKQREM
ELEGTQKRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAK
EKRLKKDAGRARWGQYFRGNNNNNNIKRKGSPARSEQNGAVDDLDSDLSKDIVYSDGQMV
AMSPGSDIYPGGTLEGDPALGPMPTNPGYPVDSSPYPTLQGGNTYNMSHSPPVPLGGPPG
IHPGMPYGDGGLGSQSFGQAMRVMVGGPGSDLSSGSSQGGYPDFPASPSSWLDDVDSHY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctgacagcaggaccttccccggtaacgatcaccgccaacacggcagccagc
ccgccagccccgtccaacggcgcgcccaccggcggctccactgcccccaccccggaggtg
ctgtacgcgctactggccaacgacaaatcccttgaagcgaacatcccgaagtgtgcgggg
tgcgaacaagtgatcctggaccgtttcatcctgaaagtcctggacaggtcgtggcacgcc
aagtgtctgcagtgctcggactgccaggcccagctcaccgacaagtgtttctctcgggac
ggacacgtgtactgcaaggacgacttcttcaggcgatttgggacgaaatgtgcgggttgt
gggcaggggatcccccccacccaggtggtcaggcgcgcacaggacaagatctatcacctg
cagtgtttcgcctgtatcatgtgcaagaggcagctggccaccggggacgagttctatctg
atggaagacgccaaactggtctgcaaaagtgactacgaagcagcgaaacagagagaaatg
gaactggagggaacacagaagagaccccgcacaactatcaccgccaagcagctcgagacc
ctgaaacaagcctaccaaaacagccccaaacccgcccgccacgtcagggagcaactgtcg
caggagacgggactggacatgagggtagtgcaggtgtggttccagaacagaagagcgaaa
gagaagagactgaagaaggacgccggtcgggcccggtgggggcagtacttccgcggaaac
aacaacaacaacaatatcaaacggaaaggctctccggctagaagcgaacaaaatggcgct
gtggacgatctagactccgatctctctaaggatatagtttattcagatggacagatggta
gcgatgagcccaggaagtgacatctacccgggcgggactttggaaggcgaccccgcgctc
ggccccatgcctaccaacccgggctacccggtagacagtagtccgtaccccacactacaa
ggcgggaacacctacaacatgtcgcactctccacccgtccctctcggcggcccaccaggc
atccaccccggcatgccgtacggagatggcgggctgggcagtcagagtttcggccaagcc
atgagggtgatggtggggggacccggctcggacctgtccagcggcagcagtcaaggcggt
tacccagacttccctgccagtccctcctcgtggcttgatgacgtagacagccactactga
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