Branchiostoma floridae (Florida lancelet): 118421541
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Entry
118421541 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-like isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118421541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118421541
03036 Chromosome and associated proteins [BR:
bfo03036
]
118421541
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118421541
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118421541
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118421541
Noncanonical PRC1 (PRC1.1)
118421541
Noncanonical PRC1 (PRC1.3/1.5)
118421541
Noncanonical PRC1 (PRC1.6)
118421541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
Ubl_WDR48-Bun107
zf-C3HC4_5
SBP
Motif
Other DBs
NCBI-GeneID:
118421541
NCBI-ProteinID:
XP_035684761
UniProt:
A0A9J7LKU4
LinkDB
All DBs
Position
8
Genome browser
AA seq
373 aa
AA seq
DB search
MQTTVPVNVPNVPPPNKTWELSLYELHRTPQEAITDTTEIAVSPRSLHSELMCPICLDML
KNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRD
EYEAHQERVLARLNKHHNQQALSSSIEEGLKLQALNRAQRVRKHLEEPSGGDLGQPRKRP
KTGSDESGAEQESHNSGGENFCDPPEPLNEVELVFKPHPNNHEDSEHGSQTSPADISESC
ARSLSGWQPSVPPTPEAVNEIELVFKPHPSPTASKADSQTSDRKFTRKYIKTTANATVDH
LSRYLAMRLALEKQKEDVAGPPSVGTEEPQYTIYIAPTPGQFVALTGGMSLEAVNEKHWK
VNRPLEMYYSLKK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccacggtaccggtgaacgttccgaacgttcccccgcccaacaagacatgggag
ctgagtctgtacgagctccatcgtacgccacaggaggccatcacggacaccacggagatc
gcggtgtccccacgcagcctacacagtgagctgatgtgcccgatatgtctggatatgttg
aagaacaccatgacgaccaaggagtgtcttcatcgcttctgtcaagactgtatcatcaca
gccctacgcagtggcaacaaggagtgtccaacctgccgcaagaaactggtgtccaaacgc
tccctcagaccagacccaaacttcgatgctctcatttctaagatctaccccagccgtgat
gagtacgaggctcaccaggagcgtgtgctggcccgactgaacaagcaccacaaccaacag
gcacttagctccagcatagaggagggcctcaagctgcaggcactcaacagggcccagcgt
gttaggaaacatttggaagagccgagtggcggggacctgggccagccacgtaagagaccc
aagactggatccgacgagtctggtgcggaacaagagtctcacaactcaggaggcgagaac
ttctgtgacccacccgaacctttgaatgaggttgagttggttttcaaaccacatcccaac
aaccacgaagactctgagcatggcagccaaacaagcccagctgacatcagcgaatcctgt
gcccgctcactcagtggatggcaacctagtgtcccaccaactccagaagctgtgaacgag
attgagttagtcttcaaaccacatccctcgcccacagcttctaaggcagacagtcagaca
agcgacagaaaattcacccgaaagtacatcaagacgacagccaacgctacagtggaccac
ctgtccaggtacctggcaatgcgcctggcgctggagaaacagaaggaagacgtggccggt
cctcccagtgttggtactgaggagccacagtacaccatctacatagcacccactccagga
cagtttgtggcactgacagggggcatgagcctggaagctgtgaacgagaaacactggaag
gtaaacagaccgctggagatgtactactctctcaagaaatga
DBGET
integrated database retrieval system
