Branchiostoma floridae (Florida lancelet): 118421822
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Entry
118421822 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
bfo04137
Mitophagy - animal
bfo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118421822
04120 Ubiquitin mediated proteolysis
118421822
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118421822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118421822
04121 Ubiquitin system [BR:
bfo04121
]
118421822
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118421822
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118421822
Membrane trafficking [BR:
bfo04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118421822
Aggrephagy
Other aggrephagy associated proteins
118421822
Xenophagy
Other xenophagy associated proteins
118421822
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118421822
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118421822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR
Motif
Other DBs
NCBI-GeneID:
118421822
NCBI-ProteinID:
XP_035685215
UniProt:
A0A9J7LNU8
LinkDB
All DBs
Position
8:complement(16112597..16123900)
Genome browser
AA seq
391 aa
AA seq
DB search
MPMGFMLTPSQQEVIPKDCQLGQQTVIHAISGLPQLSVDARSSAAAPRSLSDVQLNVRPE
GADTAAGSLPSYFVFCKRPCKAVRPGKLRVRCGTCRQTTLTLSRDPNCWEDVLVPGKIQG
RCLSRGCPGTVAEFYFKCADHHTSEDDTSVALPLVKSNTQSVDCLGCTDVRTPVMVFECA
DGHVMCLDCFARYCVTKLNDRQFVQHASLGYTLPCPGGCDNSLIKEVHHFRMLGDEQYDR
YQRFGAEECVLQMGGVLCPGRGCGVGLLPEGSSNMVECVRQAGSGCGFVFCKLCKEAYHN
GPCGQTAPQPSAPANNYRVDRDRARRARWERRTAATIERTTKACPGCKVRTEKNDGCMHM
TCPRCGFHWCWLCEREWGRNCQDRHWFGEGR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgggcttcatgcttaccccgtcccaacaggaagtgatcccaaaggattgtcag
cttggtcagcagacggttatccacgccatcagcggactgccccagctgtcagtggacgcc
cgtagctctgctgcagcaccccggtctctgagtgatgtacagctgaacgtacggcctgaa
ggcgctgatacagccgcgggcagtctcccctcttatttcgtgttctgtaagcggccgtgt
aaggcggtgaggccggggaagctgagggtccggtgtggcacgtgcagacagacaaccctc
actctcagcagggatccaaactgttgggaggacgttttggtgcccggaaagatccaaggc
aggtgcctgtccagagggtgtccaggaaccgtcgccgagttttacttcaagtgtgcggac
caccacacatctgaggatgacacatctgtggcactgcctctggtgaagagcaacacacag
agtgtggactgtctcggctgtactgatgtcaggacccccgtgatggtgtttgagtgcgct
gacggacacgtcatgtgcctggactgcttcgcccgctactgcgtcaccaagctgaacgac
aggcagttcgtccaacatgcctcactggggtacacgctgccatgtccgggtggctgtgac
aactccctgattaaggaggtgcatcatttcagaatgcttggagatgaacagtacgaccgt
taccagcgtttcggtgcggaggagtgcgtgctgcagatgggcggagtgctgtgtccgggg
cggggctgtggggtggggctgctgccggaggggagcagtaacatggtggagtgtgtgcgg
caggcgggcagcggctgcgggttcgtgttctgcaagctttgtaaggaagcctaccacaac
ggcccgtgtggtcagactgcgccacaaccctcagctccggctaacaactaccgagtggac
cgagatcgggcccgccgtgcacgctgggagaggcgcacagctgccaccatcgaaaggacc
accaaggcctgcccggggtgtaaggtccgcaccgagaaaaacgacggctgtatgcacatg
acgtgcccgaggtgcggcttccattggtgctggctgtgtgagcgggagtgggggaggaac
tgtcaggacaggcactggtttggggaggggcgctaa
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