KEGG   Branchiostoma floridae (Florida lancelet): 118421848
Entry
118421848         CDS       T01074                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bfo03000]
    118421848
   04121 Ubiquitin system [BR:bfo04121]
    118421848
Transcription factors [BR:bfo03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    118421848
Ubiquitin system [BR:bfo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118421848
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH zf-C3HC4_3 Prok-RING_4 zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4 Vesi_VP2 Fer2 zf-CCCH_4 FYVE YqfQ RING_XB3-XBAT31 zf-RING_10 zf-RING_11
Other DBs
NCBI-GeneID: 118421848
NCBI-ProteinID: XP_035685243
UniProt: A0A9J7LLS2
LinkDB
Position
8:complement(18377603..18406873)
AA seq 1272 aa
MPIQAPQWTDFLSCPICYNEFNENQRKPISLGCGHTVCQTCLGQFHSKQCPFDQTTISVD
TDVLPVNFAILQLVSGDAQKSENGVAGVTEFTEYYEDAMECIEELALYLKPFSGGGAGNN
STLSRPMQRKLVTLVNCQLVEDEGRARAMRAARSLGERTVTELILQHQNPQQLSQNLWAA
VRARGCQFLGPAMQEETLKLILLALEDGSALSRKVLVMFVVQRLEKQFSQASKTSIGHVV
QLLYRASCFKVYKRDGDSSLMELKEEFRTYDGLRREHDAQIVQIAMEAGLRISPEQWSSL
LYGDTAHKSHMQSIIDKLQTPASFAQSVNELVIALQRSGDPANLSRLRPYFDELAKIDPS
PDSETPLWDNTRKGMQAVKLVVQGVVDFIQNYSGNRKGDSAQVTSGKYKTSMCRDLNRNG
TGCPRGINCTFAHSDEEMYRYRARNRKAVEKGTTKEIPSFKGEVKKGSPLVAKGTSSPPS
PPPPGLVSRSTVSEHSSNGVGLREPPDMPPSQSPPSSYSRQAVYPPRVASMEQYHHQPQG
GAMRQPLPSEMPPEQGPTYMVETVQVQMVPVEAGYPRVVSGYYPPQHPQYMPQQPPPPPM
TPPYPAQYPPPASYRPQDPAPPPPFPHRPYVQDSYGNGIYPPPPPANQYPPQQYAPPMDR
GAWPRYSLRDDMPVRVSTRSGYADYDGMVHQYQGPYQGSMSQPMSLQSQSLKDLQRRRDE
LLAQLNHPAHCMPVARSPSPSPYSSPAHTPPSTLNSKATPFFPRKPDYADETEKDGEVQS
DSTEQAKEYSPWSSGTLIQTKDVMPHTATPSSSSTTVVSSSQSSFSRNYPTESSLVTEIR
RLSDEALAQVLVREDLNYLRGQDQPGYLIRQEVQRRTLERAKELEDDLIPFSSTPMVSKY
GPISRTARAMIRNTGPYQSNAIAGNTSTVSVKSTENLIQSTHERVHSPTDPEDQDSRYAK
KPAVSMYRGVWNITDREDPSQNTRINNLPSAPVVTSRASGTSTVEREQLKLELRQINNQI
NSHQQQQQIQEAKNAMLLKREQDALAWLKSSVSDKQLNDDQRLAYELQRIELGIREKERE
LQRVGMKDKQWKTLPRSQDDTASDFEIARQLQEFENGHRSKPGSDSTDRNRHAVQDDLEA
NDYRVALEAQKAEELSEIEYQLRREAERKQRLAQERERLDQEERDRRLAEHLAYSEVGTV
GYQHQTSDRPSYASAVADRRVRVNGVHGAVRDLQLAPRISTGQDTVVTSSVARAKPCTLP
SNVVEDSSVGVH
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgccgatccaagcgccacagtggacggacttcctgtcctgtccgatctgttacaacgag
tttaacgagaaccagcggaagccgatcagcctgggatgcgggcacaccgtgtgccagaca
tgcctgggacagttccacagcaagcagtgtcccttcgaccagaccaccatctccgtggac
acggacgtcctgcccgtcaacttcgccatcctgcagttggtcagcggcgatgcgcagaag
tcggagaacggcgttgcgggagtcaccgagtttacggagtattacgaggatgccatggag
tgtatagaggagctggccttgtacctgaagccattcagtggtggaggagcaggaaacaac
agcactctaagtcgacccatgcagcgtaaactggtcacgctggtcaactgccagctggtg
gaggatgagggcagagctcgtgccatgagagcggcacgatctctcggagagcggacggtg
acggagctgattctgcagcaccagaacccacagcaactgtcacagaacctgtgggcggca
gtcagggccagggggtgccagttcctggggccagccatgcaggaagaaaccctgaagctg
atcctgttggctcttgaggacggttctgccctgtccagaaaggttctggtcatgtttgtg
gtgcagagactggagaagcagttctcccaagcctccaagaccagcattggccacgtggtg
cagctcttgtacagggcctcctgcttcaaggtgtacaagagagatggagactcctcactc
atggaactcaaggaagagttccgtacatatgacggcctgagaagagaacacgacgctcag
attgttcagatagccatggaggctggactgaggatatctcctgagcagtggtcctctctt
ctgtacggggacacggctcacaagtctcacatgcagtctatcatcgacaagttgcagacg
ccagcgtccttcgcccagagcgtgaacgagctggtcatcgccctgcagcgctccggcgac
cccgccaacctgtcgcgcctgcgcccgtacttcgacgagctggccaagatcgacccgagc
ccggacagcgagacgccgctgtgggacaacacccggaagggcatgcaggcggtcaagctg
gtggtgcagggcgtggtggacttcatccagaactacagcggcaacaggaagggcgactct
gcacaggtgacaagtgggaaatataagaccagcatgtgccgggacctgaaccgaaacgga
accggctgccctcgtggcatcaactgcacatttgcacactccgatgaggagatgtacagg
taccgtgctaggaacagaaaagctgtggagaaagggaccacaaaggagattccctccttt
aagggggaagtgaagaaaggcagccccctggtcgccaagggaacgtcctctcccccttct
ccaccacctccaggcctggtctcaaggtcgactgtctcagaacacagttctaatggggtc
ggtctgagggagccgcctgacatgccaccgtctcagtctccaccgtcttcgtacagcaga
caggcagtgtacccacccagggtcgcatccatggagcagtaccatcaccagccacaaggg
ggcgccatgagacagcctctaccctcagaaatgccacctgaacaaggtccgacttacatg
gtggaaacagtgcaagtgcagatggtgcccgtggaggcaggttatccaagggttgtcagc
ggttactaccctccacaacacccgcagtacatgccgcaacaaccaccgccacctcccatg
acccctccgtatccagcgcagtatcccccgccagcgtcgtatcgtccccaggaccccgcg
ccgccgccgccgttcccccatcgaccgtacgtacaggacagctacggaaacggtatctac
ccgccgccgccgccagccaaccagtacccgccacagcagtacgccccgcccatggatagg
ggggcctggccgcggtactcccttcgggacgacatgcctgtcagagtctccaccagaagc
ggatatgctgactacgacggcatggtgcaccagtaccaagggccttaccaggggagcatg
tcacagccaatgagcctacaaagccaaagtctgaaggacctacagcgtagaagggacgaa
ctcctggcccagctgaaccaccctgcacactgcatgcccgtggcgcgctccccctccccc
tccccttacagctcccctgcacacacgcccccctccaccctcaactccaaagccactccc
tttttcccgcggaagccagactacgctgacgagacggaaaaggatggcgaggtgcagtcg
gacagcacagagcaggcgaaggagtacagcccgtggtcgagcgggaccctgatccagacg
aaggacgtcatgccgcacacggccactccctcctcctcctcgacgaccgtggtgtccagc
tcgcagtcgtctttcagcaggaactacccgacagagagctcgctcgtgacggagatccgc
cgcctctcggacgaggcgctggcacaggtcctggtacgggaggacctgaactacctgcgt
gggcaggaccagccggggtacctcatccgtcaggaggtgcagcgccgcacgctcgagcgc
gccaaggagctggaggacgacctcatccccttctccagcacccccatggtgtccaagtac
ggccccatctcacgcacagccagggccatgatacggaacaccggaccataccaatccaac
gccatcgcggggaacaccagcactgtgtccgtcaagtccacggagaacctgatccagtcc
acgcacgagcgagtccacagccccaccgacccggaggatcaggatagcagatacgccaag
aagccggcggttagcatgtaccgcggcgtgtggaacatcaccgacagagaggatccgtcc
caaaacactagaataaataatctcccaagcgctccggtggtgacgtcgcgtgcctcgggc
acgtccacggtagagcgagagcagctgaagctggagctccgacagatcaacaaccagatc
aactcccaccagcagcaacagcagatccaggaggctaagaacgccatgctgctgaaacgt
gagcaggacgcgctggcctggctgaagagcagcgtgtccgacaaacagctgaacgacgac
cagcggctggcgtacgagctccagcggatcgaacttggcattcgcgagaaggagagagag
ctgcagagggtgggaatgaaagacaaacagtggaagaccctgcccagaagtcaggacgac
accgccagcgacttcgagatcgctcgccagcttcaggagtttgagaacggtcaccggtcc
aagccgggctccgattctaccgacaggaacagacatgctgttcaagacgacctggaagcg
aacgactaccgtgtggccctggaggcgcagaaggcggaggaactgtcggagatcgagtac
cagctccgacgcgaggccgagcgcaagcagcgcctggcccaggagcgggagagactggac
caggaagaacgggatcgccgcctggccgagcacctggcgtacagtgaggtgggtacagta
gggtaccagcaccagacctcagacagaccctcatacgccagcgctgtagcggacagaagg
gtgcgggtaaacggtgtgcacggcgccgtacgggacctgcaactggcacccaggatttcc
acgggtcaggacaccgttgtcacttcctccgtggcgagagccaagccctgcacgctacca
agcaacgtggtggaagacagcagtgtgggtgtgcactag

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