Branchiostoma floridae (Florida lancelet): 118422057
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Entry
118422057 CDS
T01074
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118422057
Cell adhesion molecules [BR:
bfo04515
]
Immunoglobulin superfamily
NGL family
118422057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_14
LRR_1
LRRNT
V-set
LRR_EndoS
LRR_Zer-1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
118422057
NCBI-ProteinID:
XP_035685456
UniProt:
A0A9J7N0K9
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All DBs
Position
8:16871230..16913735
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AA seq
734 aa
AA seq
DB search
MASSVGKLLLIILTLHVWGNTYAQRCPRECLCSPPDNSVYCSDQRLTSFPTNIPRYVSIL
SLHRNKIKTLGRGQFRSLTNLNTLELSANEISEIEPGAFIGLGDLRTLELNNNRLTSIDG
AIFQGLTRLNNLGLRNNPIYCLPKYAFSYVPSLKFLDLGRLFKLQAISKHAFAGLKNLVY
LNMTECNLVTVPHLKHLESLENLDLSRNSIDKLETDNLAELKGLGSLRMPSNLLSEIEQD
SFEDLGSLRELDLSDNYLTILPFGLFSNMRALTKVNLGGNPWNCTCEVTWLVTWLRRKTR
SDPTRESCGRCQSPWTFRGRLLCDVPVTKLKCTPPQITDAPRALNVTAGGNATLQCNTGD
SKETAVNWISPNGTMIRKGSFKLKVKFAGGRTLNFARVSTSDAGIYRCVARNSAGTTTLD
TILNVTGSVLPIFRATEIPINGEEPEDDNLCQRAFEKATSSVSGGPQLTWQRDSKPTPGR
TNETFKTPEPLPTVFEPGFDMTKNTDKPSSNVDHQKYIIASIVSVISFGLLVWLIFFLLL
RWDFCCPANRFLAKKRENRTKAQKDDGDFRTRCCRLRCCLREPEKDAPIEIPEPLQGYPT
LELTKLEQRKMNTIEVYSPVELIKDSKEFTDIDTLKGGLDIDCDVDLRQLKLHTPEKTAS
LQRKKNLESFNPAISSGVQHTCSLKKSPSKPVYTPVKIPDFHRNIADVYIIRKDPDQSCM
VPQVSDTSMKETGV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctgttggaaaacttcttttgataattcttacacttcatgtatggggtaac
acatatgctcaacgatgtccacgggagtgtctttgcagtcccccggacaatagcgtgtac
tgcagtgaccagaggctaactagtttcccgaccaacatcccgagatacgtctctattctc
agtctacacaggaacaagattaaaacgttgggtcgaggccagttccgatcattgacaaac
ctcaacacgttggagctcagtgctaatgagatatcggaaatcgagcctggtgcattcatt
ggacttggagatctgagaacattggagctgaataataatagacttacaagtatcgatggg
gcaatattccaaggcttaactcgcctcaacaatctagggttgagaaacaaccctatatat
tgccttcctaagtatgcattttcgtacgtgccatcgttaaagtttctggaccttggcaga
ttgttcaaactgcaagctatttcaaagcacgcttttgctggattgaagaatctggtgtat
ctgaacatgacggagtgcaacctcgtgacggttccacatctgaagcacctagaaagcctc
gagaacttggacctgtcccgaaactccattgacaagctcgagactgacaatttggccgag
ctgaaaggcttagggagcttgaggatgccatcaaatctgttatctgaaatcgaacaagat
agctttgaagacttggggtcacttagggagctggatctttcggacaattacctaacgatt
cttccgttcgggctcttttctaatatgagagccttgaccaaagtaaacttgggtggtaat
ccgtggaactgtacttgtgaagtcacgtggctcgtcacctggttgcgtagaaaaacgcga
agtgacccaaccagagagtcctgtggcagatgtcagtctccttggacgttccgggggaga
ttactttgcgacgttcctgtgacgaaattgaaatgtaccccgccacaaatcactgacgcg
ccgagggctctgaatgttacagctggtggaaatgctactctccagtgcaacaccggggat
tcaaaagagacggccgttaactggatatcaccgaacggaaccatgattcgaaaaggttct
tttaagcttaaagtcaagttcgccgggggtcggaccttgaacttcgccagagtctcaaca
tctgacgctggaatttacagatgcgttgcgagaaattcggcaggaacaacaacgttagat
accattctgaacgtcacgggaagtgtacttccaatcttccgtgcgacagaaatacctata
aatggtgaagagccagaagacgataacttgtgccagcgggcgtttgagaaggctacttca
tccgtcagcggtgggcctcagctaacctggcagcgtgactccaaaccaacacccgggagg
actaatgaaacattcaaaacgccagagcctcttccgactgtctttgaacctggctttgat
atgacgaagaatacagataaaccctcttcaaacgtagatcaccagaagtacatcattgca
tccatcgtgtcggttatatcgtttggtttgttggtatggctcattttcttccttttactg
agatgggatttctgttgccctgcgaataggtttttggcgaagaagcgagaaaatagaaca
aaagcccagaaagacgacggcgatttcaggacacgatgctgcagactacgttgctgtctg
cgggaaccagaaaaggacgcccccatcgaaattcccgagccattgcaaggttatccaaca
ttggaactcaccaaactggaacagcggaaaatgaacaccattgaggtttacagcccggtc
gaactgataaaggactcaaaggagttcacagatatcgatactcttaaaggaggtttagac
atagactgtgacgttgatttaagacaactgaagttacacactcctgaaaagactgccagt
ttacagagaaagaaaaacttggagagttttaatcctgccatatcctcaggtgtacagcat
acttgcagtctgaagaagagtccttctaagcctgtttacacccctgtgaaaatacccgac
ttccatagaaatatcgcggatgtctacatcatccggaaagatcccgatcagagctgcatg
gttccgcaggtgtcagatacctctatgaaggaaactggcgtttag
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