Branchiostoma floridae (Florida lancelet): 118422286
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Entry
118422286 CDS
T01074
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118422286
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
118422286
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_8th
CILP_C
CILP_5th
Ig_3
I-set
CILP
TSP_1
Ig_2
TSP1_spondin
CarboxypepD_reg
ig
CarbopepD_reg_2
V-set
TSP1_ADAMTS
TTR_TEN1-4
TSP1_CFP_C
Big_1
FlgD_ig
Motif
Other DBs
NCBI-GeneID:
118422286
NCBI-ProteinID:
XP_035685698
UniProt:
A0A9J7LNY9
LinkDB
All DBs
Position
9:21043754..21050915
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AA seq
1142 aa
AA seq
DB search
MSRNKVGDVELSEATNATQQERFESRSDLTPGKTKKPCTRSPVFISVVTVFSVLAVGGIV
VGVLVATGVINTQTSGPPLILTTDGAWTTWAEWGACDVTCGGGVQRRTRTCSNPAPEGDG
MDCAGRDSQVRACSDWNCPDCDRDCAVGSLNDACDTCICDNNVLNGRVTDRRNVPLNNAE
VFFAEKPWEAATTTNATGRFTLAGACSQGVEVMVKRSGYFDEYANSTQVDSLTSSVIVKM
RVREPPMMDENPVGKVRHVGQDVTFCCKAHGTPMPSSYEWFKDDRVLDDDVYQYNETLTL
YDLQTGDSGVYKCRANGDAGAKYSTGALLTVYDTGTPMCNSTPTTKLIDLPDDCVQPDTN
TNKYDIGACSREKCAGDLGEDDKGCLDTRKFCCMPTVVSSRTVQCSGYTLDVIATTECGC
GACVELTRKVKGRAFGLKNGTEIVLNGGEVAMSGQMQGHTTASGEFELVVPSTVDHVTLT
FKDGSKKLVTTTKVLPIEEGIEPYFRVRMQVRPPAAPLNASETSTINLGTLPDQPPLAEV
DIPPNSFFTESGDPYTGTVQASVGFIDPRNPDDFDDIQSDLTTVDEEGTQQALRTYGMFS
MDFEDDTGNPVVMGGKMSMHIDPAQININPDDVDENGNLNTKLWSMNPSSGEWELVGNLR
TGTASRRGKRAQTFFIGEFEFRGEPINCDKRETTTRRCWVKVRVYKNEEAAKSVKGSDQE
RGAQVTVVTVDTPAYTSSWWGSNRGLSRYQTLTVGSNGACVETFCEPSGREFNASVLVSH
GGSQLKALHVSDQPHPTKWPSNLHNSVEHNDDFRSISFDVFKPTTADGPIYKYEHRSLCN
DAPIEHNHIAFFNTEYEPYIFPPYVFDEAQYNEPINALSWYNREDTNKTVCFIKVKVRFS
NPHGKVEIRIKSEGGGGYPGNAGKVYGIRDDEIDSGDSREGFGCLEFKCPGPVMTSPGDG
MPSRPLPGNPEDTVLLAVVAKNTRCYYQRSNNLYRNARSYQDSRAATYFTTYPTTDTTPD
YTPDTTETPTTETTPTPAAATAARYTPGTWPWWMTAPDPTTDYSNGTSPATGIQLVSSSG
RNQVKLRLPTGTDFSGAPGIYMKQGEKQIGYNAAREYCMKGSESPGAPDSVLNWGVEFYC
SF
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggaacaaggttggtgacgttgagctctctgaggcgaccaacgctacgcaacag
gagcgctttgagagtcgcagcgacttaacaccaggaaagacaaagaaaccctgcacgaga
agccctgtcttcatctcggttgtgaccgtcttttctgtgctcgctgtaggaggaatagtg
gtgggagtgctcgtggcgactggcgtcataaacacacagacatctggaccaccgttgatt
cttacaacagatggggcttggaccacctgggcagaatggggcgcttgtgacgtcacatgt
gggggcggtgtgcagcgcaggaccaggacctgctccaaccctgccccggagggtgacggg
atggactgcgccgggagagactcccaggtccgggcctgcagcgactggaactgtcctgat
tgcgaccgtgactgtgccgtcggcagcctaaacgatgcctgcgacacctgcatctgcgac
aacaacgtgctgaacggccgcgtgacggacaggagaaacgtgcccctgaacaacgccgag
gtcttcttcgccgagaagccgtgggaggccgccaccacgaccaacgcgaccggcaggttc
accctggccggagcctgctcgcagggtgtggaagtcatggtgaagagaagcggctacttt
gacgagtacgctaactctacacaagtggacagtctgacatcttccgtcatcgtgaagatg
agggtgagagaaccgccgatgatggacgagaatcctgtaggaaaagttcggcatgtcgga
caagacgtgacgttttgctgcaaagctcacggcacaccgatgccctcttcatacgaatgg
tttaaggatgacagggtgttggacgatgacgtgtaccagtacaacgagaccctgactctg
tacgacttacagacgggagactcgggagtctacaagtgtcgggccaacggtgacgcaggc
gccaagtactcaacaggagcccttcttaccgtgtatgataccggcacgcccatgtgtaac
tcgacacctactaccaagctcatcgaccttcccgacgactgtgtccagcccgacaccaac
acgaacaagtacgacatcggggcctgcagcagggagaagtgtgcgggagatctgggagag
gacgacaagggttgtctggacaccaggaagttctgctgtatgccaacagtggttagttct
cgtacagtgcagtgtagtggttatactttagatgtgatagcgacaactgaatgtgggtgt
ggggcatgtgtagagctaactagaaaggttaagggtcgagcttttggtctcaaaaacggc
acagaaatcgtgttaaatggaggtgaagtcgccatgagcgggcagatgcagggccacaca
actgcatcaggtgaatttgaacttgtcgtgccttccacagtcgatcatgtgactctgaca
tttaaggatggctcaaagaaattggtcactactactaaagtgttgccgatagaagaaggc
attgagccgtactttagagtcaggatgcaggtacggccgccagccgccccccttaacgcc
tccgaaaccagtacaatcaatctcggcacccttccagaccagccccctctcgcagaggta
gacatccctcctaactctttcttcaccgagagcggtgatccctacacaggtacagttcag
gctagtgtgggttttatagaccccagaaaccctgacgactttgacgacattcagagcgat
ctgaccacagttgatgaggaggggacccaacaagctttgcgcacatacggcatgttttct
atggactttgaagatgatacaggaaaccctgtagttatgggagggaagatgtcaatgcac
atagatccggcacaaatcaacatcaatccagatgatgttgacgaaaacggaaaccttaac
actaaactgtggtccatgaaccccagttctggggagtgggagttggtgggtaacctgagg
acagggacggcatcaaggagggggaagcgggcacagacgtttttcattggcgaatttgaa
tttcggggagagccaatcaactgtgacaaacgggagacaactactaggagatgttgggtc
aaagtcagggtgtacaaaaatgaagaggcagctaagagtgtaaagggtagtgaccaagaa
agaggggcacaggtaaccgtagtcaccgtagatacacctgcatatacctcaagctggtgg
gggtcgaatcggggtttaagtcgataccagacccttacagtgggttctaacggagcgtgt
gttgagacattctgtgagcctagtgggagggagtttaacgcatccgtactggttagtcac
ggaggcagccaactgaaagccttgcatgtcagcgatcagcctcatcccacaaagtggccc
agtaacctccataacagtgttgaacataacgatgatttcaggagcatctcgttcgatgtc
ttcaaaccaaccacagccgatggtcccatctataagtatgagcaccggtctttgtgtaat
gacgcaccaattgagcataatcacatcgctttcttcaacacagaatacgaaccctacata
ttccctccttacgtgttcgatgaggcacagtacaatgagcccatcaatgcactatcctgg
tacaatagggaagacactaacaagactgtctgcttcatcaaagtcaaagtccgcttcagc
aacccacacggtaaagtagaaatccgcataaaaagcgaaggagggggaggttatcctgga
aatgccggtaaagtgtacgggattcgggatgatgagatagactccggggatagcagggag
gggtttggctgtctggagttcaaatgtccaggtccggttatgacaagtccaggggacggt
atgccctcccgtcctctccctggcaatccagaggacacggtactgctggcggtagtggct
aaaaacacgaggtgctactaccagcgcagtaacaatctctatagaaatgcccgtagctat
caggacagtagagctgcaacatattttacaacatatcccaccacagatactactcctgat
tatacccctgatactactgaaactcccaccactgaaactactcccacgcctgctgcagct
acagcagccagatatacccctgggacatggccatggtggatgactgccccagaccctaca
acagattactctaacggaacaagccctgccacaggcatacagttagtcagttcatcaggt
cgcaaccaagtgaagttaaggcttcccacagggaccgacttcagcggcgcaccaggcatc
tatatgaaacagggtgagaagcagattgggtacaatgcagctcgcgagtactgcatgaag
ggttcagaatcccctggtgcgccagacagtgtgctcaactggggagtagagttctactgc
tctttctag
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