Branchiostoma floridae (Florida lancelet): 118422354
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Entry
118422354 CDS
T01074
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118422354
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118422354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
KH_N4BP1_1st
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
118422354
NCBI-ProteinID:
XP_035685767
UniProt:
A0A9J7LNC0
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All DBs
Position
9:complement(23346416..23377118)
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AA seq
939 aa
AA seq
DB search
MQADQERKEASGPCEFVVPAGVREQLMAAKQRVETLFRVTVLLLSVSSAEPTTSSNQWVR
VEGEKERQLRAKDYILSLCCPELTRDEQCSPEFYDALDKLRSKIEYESQAALTALNNATF
RIQAYNEIQLTTALSLIEAEKKRFVTTDMRHTAAENISLSMNNGEIGLPRTLDNLPSGVK
RSDESLDSIDGRRSNTSSPKGSDDESFDPYSDPESIIKMEFAVKLGYPEVDVVRVLKKLG
PDALQNDILGDLVKIGVGMKEEDSEEKQRLVAKGGRSTPLSACDKNDDEAVFTDEDETDN
LRPLVIDGSNVAMSHGNKEVFSCKGIALAVDYFIKRGHRDITVFVPNWRKEASRPEQPIA
EQQILDKLEKDKILVYTPSRRVAGRRVVCYDDRFILRLANETDGIIVSNDNYRDLQTEKP
EWKKIIEERLLMYSFVNDRFMVPDDPLGRYGPTLDNFLRKKPTAPEKKAPPCPYGKKCTY
GNKCKYYHPERGNVPQKSVSEQIMEDGKNRVKALHKRASLSNVKDVKKDTPRVRDSRKLG
TETASPSNLPEETPTLYANLSTESKPTNVEKSSKQAVVEKPVGGDRELKPKSTRKETPVS
LDTKDVFQGDESVSMPPQMHRQVQDVSAAPFMSWQGPARPHPAHSPQAMHSYHGSARDVM
SADPNAQWNRPPPQPQQQPMYARDPRDPRMQQYSRPYDPMMQQQPYPDYSINTFYSSPEP
GRDHLSQEMSNMTLRDATSLPPESGYISGRHGSWDMYQHYHSQPGVHSLQHQPPTDPYRD
PRGGGSHPFQYTRQSSTSEPQLFHDPHMRQRGPVYNNGQQNNLNYGVTSSQHHHHQLRSR
AMPANIPPEYDSYWHHGHTNMQPAQYGYPANVQPREQYPMKSNPDDAPIMQDDPRYRIYV
NLSSVFQPDKVRQVLNRYPHERDPSKISQIIVDMQVLKN
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggaccaggaaaggaaggaggcgtcggggccgtgtgagttcgtcgtcccagcc
ggtgtgagagagcagttgatggcggcgaagcagcgggtagagacgctattcagagtgacc
gtgcttctgctgagcgtttcgtcggcggaacccacgacttcctccaaccagtgggttcgg
gtagagggcgagaaagagcgccagcttcgcgctaaggattacattctctctctctgctgt
ccggagctgacccgagacgagcagtgcagtccagagttctacgacgcgctcgacaaacta
cggagcaagatagagtacgaatcgcaggccgcactcaccgccctaaacaacgccacattc
cggatccaagcctacaacgagattcagctcaccaccgcactatcgttgatcgaagcggag
aaaaagagatttgttacaacagacatgaggcatacggcagcagaaaatatctctctcagt
atgaacaatggtgagattggtttacccagaacactcgacaatctaccctccggtgtaaag
agatcagatgaaagcttggacagcatagatggccgtaggtcgaacacaagcagcccgaaa
gggtctgacgatgaaagctttgatccttactcggacccggagagcattataaaaatggag
tttgcagtgaagctaggatatcccgaggtagacgtggtgagagtcctgaaaaagttggga
ccggacgcgctccaaaacgacatcctcggagacctggtaaagattggagtcgggatgaaa
gaggaagattcggaagaaaagcaaagactggttgccaaagggggtcggtccacgcctctc
tctgcgtgcgataaaaatgatgacgaggctgtctttacagatgaggatgaaacagacaat
ctccggccgcttgttatcgatggaagcaatgttgccatgagccacggaaacaaggaagta
ttctcctgcaaggggatcgctctggctgtggactactttatcaagaggggacaccgcgac
atcaccgtctttgtacctaactggagaaaggaagcgtcaagacctgaacaaccaatcgct
gaacaacagatcctggacaagctggagaaagataagatcctagtctacacaccttcaaga
cgcgtggcggggcggagagtcgtctgctacgacgacaggttcatcttgcgccttgccaac
gagacggacggaatcatcgtctccaacgacaactaccgggatctccagacggagaaaccc
gagtggaagaaaattatagaggagagacttctgatgtactcttttgttaatgacagattc
atggtgccagacgaccctctagggcggtacggtccgaccctcgacaacttcctaaggaag
aagccaacagctccagaaaagaaggctcccccatgcccttatggcaagaagtgcacctat
ggcaacaagtgtaagtactaccaccccgagagggggaacgtgccccagaagtcagtgtca
gaacagatcatggaggatggcaagaaccgagtcaaggcgctacacaagagggcgtcgctc
tctaacgtcaaggacgtaaagaaagacacgccgagagtacgggattcgagaaagctcggg
acggagaccgcatctcctagcaaccttcccgaagagactccgacgttgtacgcgaactta
agcacggaatcaaaacctacgaacgtagagaaaagcagcaaacaggcagttgtagagaaa
ccggtcggcggcgaccgcgaactgaaaccaaagtccacaagaaaggaaaccccggtttcc
ctagacactaaagacgtcttccaaggtgacgagagtgtctccatgcctcctcagatgcat
cgacaggtacaagacgtctcggccgccccgttcatgtcttggcagggccctgcgaggcca
caccctgctcacagcccccaagccatgcactcgtaccacgggtctgcacgggatgtgatg
agtgctgaccctaacgctcagtggaacagaccaccaccccagccccagcagcagccgatg
tatgcccgtgacccccgtgacccccgtatgcagcagtacagccgtccgtacgatcccatg
atgcagcagcagccgtacccagactactccatcaacaccttctactccagcccggagccg
gggcgggaccacctgagtcaggagatgagcaacatgacgctacgcgatgccaccagcctc
ccgcctgagagcggatacatctccggcaggcacggcagctgggacatgtaccagcactac
cacagccagcctggtgtccacagcctccaacatcagccccctacggacccttaccgtgac
ccccgcgggggcggctcacaccccttccagtacactcgccagtccagcacctcggaaccc
cagctgttccacgatccacacatgcgtcagcgcggccctgtctacaacaacggtcagcag
aacaacctgaactatggcgtgacgtcttcacaacatcatcaccaccaactccgcagtcga
gccatgcctgctaacatcccaccagagtatgacagctactggcaccacgggcacacaaat
atgcagcccgctcagtacggctaccctgcaaacgttcaaccgcgagagcagtaccctatg
aagtcaaatcccgacgatgcaccgatcatgcaagacgaccctcgctatcgcatctacgtc
aacctgagcagtgtgttccaaccggacaaggttcgtcaggtgctgaaccggtacccgcac
gagagggacccgtccaaaatcagtcaaatcatcgtggacatgcaggtgttgaagaattag
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