Branchiostoma floridae (Florida lancelet): 118422378
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Entry
118422378 CDS
T01074
Name
(RefSeq) dystrophin-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04517
IgSF CAM signaling
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118422378
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118422378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118422378
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118422378
Intermediate filaments
Intermediate filament-binding proteins
118422378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
Spectrin_SYNE1
SR_desmoplakin_3
Baculo_PEP_C
DUF6399
HisKA_2
Motif
Other DBs
NCBI-GeneID:
118422378
NCBI-ProteinID:
XP_035685791
UniProt:
A0A9J7MZH9
LinkDB
All DBs
Position
9
Genome browser
AA seq
1706 aa
AA seq
DB search
MAEFSFHLNDEEYGDLDDHDEFGKIIKERSDEREDVQKKTFAKWINSQLSKVEGQQVREL
FEDLKDGTKLLSLLEILCGTKLAREKGRMRVHYLNNVNRALQVLDKHNVKLVNISSNDIV
DGNPKLTLGLVWSIILHWQVKDVMKDVMADLQQSNLEKTLLAWCRQTTQGYRSVDIVNFT
SSWRDGYAFNALIHKYRPDLFDYNILSKMGTEKRLEHAFKVANEHLNIDRLLDPEDVNVE
IPDKKSIIMYVTLFFQVLPHQKITQEAMQEALEVSAPGYAAKQRALKTVSNKQETEVLVD
GTVTKTSTVTIQRNESQVVVKQEVVTTKVTQGQGQTTTKVKQQEVKQEVQVKPEVHQLKQ
EVQQVKQTQGATRASPARQRSGVDLGAYQNALEEVLAWLLAAEEKLQHQGDISDLVDDVK
DQFHEHESFMMELTSHQSRVGSVLQAGNQLIMEGKITEDEENEIREQMSLLNSRWEVLRV
QSMDRQSKLHEVLMNLQQKQLDQLDAWLSGTEQRIKVMDTQGIGPDLDQVRRQVEEHKTL
QEGLETQQLQVNSLTHMVVVVDENSPENATQALEAQLQNLGERWAWVCKWTEDRWMVLQE
VLVRWQVFNLEQMDFHDWLTDKEGALQTMQHANLSDPNVIVAQVKKLKILEHEMEAKQPT
FQVLSGKAAEVVQHLDRSSSAVEGIQGKIEEFTQRWDAIVQKMENYSKLMSASAAVPKKT
TTITETVTKMTQKLTQKTPPPPPPKKAVSQQRRRFDSEIATLLAWIDDTEALLLSPAYTN
PATSNSLQAQTDKFNQLDENIMSYQGRVQTIQETGETLIEEEDDKIQLETRLNTFMERWN
EICVLINDRKRKLQMARLCKQFYTELDVLRDVTGRKMTWLQGQDKPSDDAVKIKQQMDEL
QVEVTDMAAHTKQSVEVTDMAAHSERVEQLNSLGSQLADSSDPPKNLQQDLTQFQLQWEE
LVAKMAAREKDLTKALEQAPPKQYLEAMKALTQWIDNVESLLTTEKFYIADIPTMKDQQQ
KFKEVQQALKDQQKSLDFVNTTGKQVVESSPPDRSRGLQKELNGLNERWSNVCAMTEDRL
EHLDKGVELLTQFQKEGDGLRTWMDEVDVYIHSEEAAVGDTETLQAQLEQSKSLQKDIAS
LQHNMNNVNEAGKRLVPEAHPDFSKKLKQELKDLNERWDAITKKQKSQKQSLEGAMKKTS
SLQLQLEAFSEWLTDKEKEGLKEDGPLEDPDDIQPRIKKYKKLKADLDKKEPDLKALNTV
GNEMATKTGSPGGLGNDLQVVNERWTVLYNTVNKRYEVSQEVWTLWQQFQVLLEQEQSWL
STLETKTQQTEAVGGDAEEISEALDALENHVRNHPSDNRDKIQEISQQLVEHKVLVEPVQ
TEVTTFTSRWDTLQQQAKLRQTALEQRIASAQDLEKDVLELERWFTRTDKLLHSRITSGV
CSSDVPEEFEQLQDEFDARDEDLEEIGRKCQALMTEGSTEATTRIRQQSEILQKRMVEIK
AKFRKYQKPADFEPKMGRVRDILNNVEKELGVLELKHHEPEMVQGQLDICMGLYKILSDV
KPEVEFVIKTGRQVVEKSQVDITEDLNERLNELKLQYNDLGAQVGMLRDQLEGMVTEGKQ
DLEKAMKLSKKLKKEMVSLTEWLGTTEAELNKKEAEGAIPANVEEELKWCKTLQQEMTRK
QSVVLIINETGKEMVELAGPGTLGPL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttttccttccatctaaacgacgaggaatacggagatctcgacgaccacgac
gagttcggcaagatcatcaaagaacgttcagacgaacgagaggacgtccagaagaaaacc
ttcgcaaagtggatcaacagccagctttctaaggttgaaggccaacaggttcgtgaactg
tttgaagatctgaaagatggaaccaaacttctcagcctgctggagatcctctgtggaact
aaattggctcgcgagaagggtcgtatgagagtacattacctgaataacgtcaatagagca
ctgcaagtactagacaagcataacgtaaagttagttaatatcagtagcaacgatatcgta
gacgggaaccccaagctgactctgggcttggtttggagcatcattctccactggcaagta
aaggatgttatgaaagacgtgatggctgatctacagcaaagcaacctggagaaaactctc
ctcgcctggtgcaggcaaaccactcaggggtatagaagtgtagacattgttaacttcacc
agtagctggagggatggatatgcctttaatgcactcatccacaagtacaggccagacctg
tttgattataatatcctgtctaagatgggcacagagaagaggctggaacacgccttcaag
gtggccaacgagcacctcaacatcgacagactcctcgaccctgaagatgtgaatgtggaa
atcccagacaagaagtccatcatcatgtacgtgacgctgttcttccaagtcttgccgcac
cagaagataacccaggaggccatgcaggaggccctggaggtgtctgctccgggctacgcc
gccaagcagagggcgctaaaaaccgtcagcaacaagcaggagacagaggttctggtggat
ggtaccgtgaccaaaacctcgacggtcaccatccaacggaacgaaagccaggtcgtggtc
aaacaggaagtagtgaccaccaaggtcacacaaggtcaaggtcaaacaaccaccaaggtc
aaacaacaggaagtgaaacaagaggttcaagtgaagcccgaggttcatcaactcaaacaa
gaagttcaacaagtcaagcagacgcagggggccacccgtgcgagccccgctcgccagaga
agcggagtggacctgggagcttaccagaatgctctggaggaggtcctggcctggctcctg
gccgcggaggagaaactgcagcatcagggagacatctccgacctggtggatgatgtcaag
gaccagtttcatgaacacgagagcttcatgatggagctgacatcccaccagagccgcgtg
gggagcgttctccaggccgggaaccagctgatcatggaggggaagatcacggaggacgag
gaaaacgagatccgggagcagatgagcctcctcaacagccgctgggaggtgctccgcgtc
cagtccatggacaggcagtccaagttgcatgaggtgctgatgaacctgcagcagaagcag
ctggaccagctcgacgcctggctgtccggcacggaacagcgtatcaaggtcatggacacg
cagggcatcgggcccgaccttgaccaggtccgcaggcaggtggaagaacacaagacgctt
caggaaggcttggagactcagcaactgcaggtgaactccctgactcatatggtggtggtg
gtggatgagaacagtcctgagaatgccacccaagccctggaggcacagctgcagaacctg
ggggagcggtgggcctgggtgtgtaagtggacggaggaccgctggatggtgctacaggag
gtgctggtgcgatggcaggtgttcaacctggagcagatggacttccacgactggctgacc
gacaaggaaggggctctgcagaccatgcagcacgccaacctcagcgaccccaacgtcatt
gttgcacaggtcaagaaactaaagattttagaacatgagatggaggccaagcagccgacc
ttccaggtgttgagcgggaaggctgcggaggttgtgcagcatctggaccgctcctcctct
gccgtggaggggattcagggcaagatcgaggagttcacgcagcgctgggatgccattgtg
cagaagatggagaactacagtaaactgatgtctgcctcggctgccgtcccgaagaagacg
accaccatcaccgagacggtcaccaagatgactcagaaactgacccagaaaacaccgccg
ccaccacctcctaagaaagcagtgagccagcagagaaggaggtttgacagcgagatcgcg
acacttcttgcctggatcgacgacacagaggccctgctgttgtcgcccgcctacaccaac
ccagctacctcaaacagcctccaggctcaaaccgacaagttcaaccagctggacgagaac
atcatgtcctatcagggccgcgtacagaccatccaggagaccggcgaaaccctcatcgag
gaagaggatgacaagattcagctggagacgcgcctgaacacgttcatggagcgctggaac
gagatctgcgtgctgatcaacgaccggaagcgaaagcttcagatggcgcgactgtgtaag
cagttctacacggagctggacgtcctgagggacgtcaccgggaggaagatgacctggctg
cagggacaggacaagcccagcgacgatgcagtcaagattaaacagcagatggatgaacta
caggttgaagttacggacatggcagcgcacactaagcagtctgttgaagttactgacatg
gcagcacacagtgagcgtgtagagcagctgaacagcctgggctctcagctggcggactcc
tcagacccgcccaagaacctgcagcaggacctgactcagttccagctgcagtgggaggaa
ctggtggccaagatggccgccagggagaaggacctcaccaaagctcttgagcaggcccct
cctaaacagtacctggaggccatgaaggcgctgacacagtggatcgataacgtggagtct
ctcctcaccacggagaagttctacatcgctgacatccccaccatgaaggatcaacagcag
aagtttaaggaggtacagcaggccctgaaggaccagcagaagagtctggacttcgtgaac
accacggggaagcaggtggtggagagttccccgccggaccggtcccgcggcctgcagaag
gagctgaacgggctgaacgagcgctggagtaacgtctgcgccatgacagaggatcggctg
gaacacctggacaagggggtcgagctcctcacgcaatttcagaaagaaggtgatggcctg
cgtacctggatggatgaggtggatgtgtacatccactcagaagaggcagcagtaggtgac
acagaaaccctacaggctcagctagaacaaagcaagtcccttcagaaggacatcgcctcc
ctccagcacaacatgaacaacgtgaacgaggcggggaagaggctggtgcctgaggcgcac
cccgacttctccaagaaactcaagcaggagctgaaggacctgaacgaacgctgggacgcc
atcaccaagaagcaaaagtctcagaagcagagtcttgagggagcgatgaagaagacgagc
tctttacagctgcagctggaggccttcagcgagtggctgactgacaaggagaaggaggga
ctgaaggaagacgggcctctggaggaccctgatgacatccagcccaggatcaagaaatat
aagaaactaaaagcagacctagacaagaaagaacccgatctgaaggccctgaacaccgtt
ggtaacgagatggcgacgaagactggcagcccgggcggactcggcaatgacctgcaggtg
gtcaacgagagatggactgtgctgtacaacaccgtgaacaagcgctacgaggtttcacag
gaggtgtggaccctgtggcagcagttccaggtgttactagaacaggagcaatcctggctg
tccaccctggagactaagacccaacagactgaggctgtgggcggagatgcagaggaaata
tctgaagctctggatgcccttgagaaccacgtgcggaaccacccgtcagacaacagggac
aagatccaggagatctcccagcagctggtggagcacaaggttctggtggagcctgtacag
acggaggtcacgaccttcacctcacgatgggacactctgcagcaacaggctaagctgcgc
cagacagcccttgagcagcggattgccagtgcccaggacctggagaaggatgtgcttgag
ctggagcgctggttcacacggacagacaagcttctgcactcgcgcatcacctcgggcgtc
tgctcctccgatgtgcctgaggagtttgagcaactacaggacgagtttgatgctcgagac
gaagacctggaggagatcgggcggaaatgtcaggcactgatgacggagggcagcacagag
gccaccaccaggatcaggcagcagtctgagatactgcagaagcgaatggttgagataaag
gcaaagttccgcaagtaccagaagccggcagacttcgagccgaagatgggtcgcgttcga
gacatcctgaacaacgttgagaaggagcttggagtgctggagctcaagcaccatgagcct
gagatggtgcaggggcaactcgacatctgtatgggcctgtacaagatcctgagcgatgtg
aaacctgaggtggagtttgtgataaagactgggcgacaggtggtggagaagagtcaagtg
gacatcacggaggaccttaacgagcggcttaacgagctgaaactccagtataacgacctg
ggtgctcaggtgggtatgctgcgggatcagctggaggggatggtgacggaaggaaaacag
gatcttgagaaggccatgaagctgtctaagaagctaaagaaggagatggtgtcccttacg
gagtggctgggcactaccgaggccgagctcaacaagaaggaggcagagggcgccatcccg
gctaatgttgaagaggaactcaagtggtgcaagacccttcagcaagagatgaccaggaaa
cagtccgtggtgctgattatcaatgagacagggaaggagatggtggaactcgcagggccc
ggcaccctcggtcccctgtag
DBGET
integrated database retrieval system
