Branchiostoma floridae (Florida lancelet): 118422378
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Entry
118422378 CDS
T01074
Name
(RefSeq) dystrophin-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118422378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118422378
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118422378
Intermediate filaments
Intermediate filament-binding proteins
118422378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
Spectrin_SYNE1
Baculo_PEP_C
DUF6399
HisKA_2
Motif
Other DBs
NCBI-GeneID:
118422378
NCBI-ProteinID:
XP_035685791
UniProt:
A0A9J7MZH9
LinkDB
All DBs
Position
9:24615015..24717754
Genome browser
AA seq
1706 aa
AA seq
DB search
MAEFSFHLNDEEYGDLDDHDEFGKIIKERSDEREDVQKKTFAKWINSQLSKVEGQQVREL
FEDLKDGTKLLSLLEILCGTKLAREKGRMRVHYLNNVNRALQVLDKHNVKLVNISSNDIV
DGNPKLTLGLVWSIILHWQVKDVMKDVMADLQQSNLEKTLLAWCRQTTQGYRSVDIVNFT
SSWRDGYAFNALIHKYRPDLFDYNILSKMGTEKRLEHAFKVANEHLNIDRLLDPEDVNVE
IPDKKSIIMYVTLFFQVLPHQKITQEAMQEALEVSAPGYAAKQRALKTVSNKQETEVLVD
GTVTKTSTVTIQRNESQVVVKQEVVTTKVTQGQGQTTTKVKQQEVKQEVQVKPEVHQLKQ
EVQQVKQTQGATRASPARQRSGVDLGAYQNALEEVLAWLLAAEEKLQHQGDISDLVDDVK
DQFHEHESFMMELTSHQSRVGSVLQAGNQLIMEGKITEDEENEIREQMSLLNSRWEVLRV
QSMDRQSKLHEVLMNLQQKQLDQLDAWLSGTEQRIKVMDTQGIGPDLDQVRRQVEEHKTL
QEGLETQQLQVNSLTHMVVVVDENSPENATQALEAQLQNLGERWAWVCKWTEDRWMVLQE
VLVRWQVFNLEQMDFHDWLTDKEGALQTMQHANLSDPNVIVAQVKKLKILEHEMEAKQPT
FQVLSGKAAEVVQHLDRSSSAVEGIQGKIEEFTQRWDAIVQKMENYSKLMSASAAVPKKT
TTITETVTKMTQKLTQKTPPPPPPKKAVSQQRRRFDSEIATLLAWIDDTEALLLSPAYTN
PATSNSLQAQTDKFNQLDENIMSYQGRVQTIQETGETLIEEEDDKIQLETRLNTFMERWN
EICVLINDRKRKLQMARLCKQFYTELDVLRDVTGRKMTWLQGQDKPSDDAVKIKQQMDEL
QVEVTDMAAHTKQSVEVTDMAAHSERVEQLNSLGSQLADSSDPPKNLQQDLTQFQLQWEE
LVAKMAAREKDLTKALEQAPPKQYLEAMKALTQWIDNVESLLTTEKFYIADIPTMKDQQQ
KFKEVQQALKDQQKSLDFVNTTGKQVVESSPPDRSRGLQKELNGLNERWSNVCAMTEDRL
EHLDKGVELLTQFQKEGDGLRTWMDEVDVYIHSEEAAVGDTETLQAQLEQSKSLQKDIAS
LQHNMNNVNEAGKRLVPEAHPDFSKKLKQELKDLNERWDAITKKQKSQKQSLEGAMKKTS
SLQLQLEAFSEWLTDKEKEGLKEDGPLEDPDDIQPRIKKYKKLKADLDKKEPDLKALNTV
GNEMATKTGSPGGLGNDLQVVNERWTVLYNTVNKRYEVSQEVWTLWQQFQVLLEQEQSWL
STLETKTQQTEAVGGDAEEISEALDALENHVRNHPSDNRDKIQEISQQLVEHKVLVEPVQ
TEVTTFTSRWDTLQQQAKLRQTALEQRIASAQDLEKDVLELERWFTRTDKLLHSRITSGV
CSSDVPEEFEQLQDEFDARDEDLEEIGRKCQALMTEGSTEATTRIRQQSEILQKRMVEIK
AKFRKYQKPADFEPKMGRVRDILNNVEKELGVLELKHHEPEMVQGQLDICMGLYKILSDV
KPEVEFVIKTGRQVVEKSQVDITEDLNERLNELKLQYNDLGAQVGMLRDQLEGMVTEGKQ
DLEKAMKLSKKLKKEMVSLTEWLGTTEAELNKKEAEGAIPANVEEELKWCKTLQQEMTRK
QSVVLIINETGKEMVELAGPGTLGPL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttttccttccatctaaacgacgaggaatacggagatctcgacgaccacgac
gagttcggcaagatcatcaaagaacgttcagacgaacgagaggacgtccagaagaaaacc
ttcgcaaagtggatcaacagccagctttctaaggttgaaggccaacaggttcgtgaactg
tttgaagatctgaaagatggaaccaaacttctcagcctgctggagatcctctgtggaact
aaattggctcgcgagaagggtcgtatgagagtacattacctgaataacgtcaatagagca
ctgcaagtactagacaagcataacgtaaagttagttaatatcagtagcaacgatatcgta
gacgggaaccccaagctgactctgggcttggtttggagcatcattctccactggcaagta
aaggatgttatgaaagacgtgatggctgatctacagcaaagcaacctggagaaaactctc
ctcgcctggtgcaggcaaaccactcaggggtatagaagtgtagacattgttaacttcacc
agtagctggagggatggatatgcctttaatgcactcatccacaagtacaggccagacctg
tttgattataatatcctgtctaagatgggcacagagaagaggctggaacacgccttcaag
gtggccaacgagcacctcaacatcgacagactcctcgaccctgaagatgtgaatgtggaa
atcccagacaagaagtccatcatcatgtacgtgacgctgttcttccaagtcttgccgcac
cagaagataacccaggaggccatgcaggaggccctggaggtgtctgctccgggctacgcc
gccaagcagagggcgctaaaaaccgtcagcaacaagcaggagacagaggttctggtggat
ggtaccgtgaccaaaacctcgacggtcaccatccaacggaacgaaagccaggtcgtggtc
aaacaggaagtagtgaccaccaaggtcacacaaggtcaaggtcaaacaaccaccaaggtc
aaacaacaggaagtgaaacaagaggttcaagtgaagcccgaggttcatcaactcaaacaa
gaagttcaacaagtcaagcagacgcagggggccacccgtgcgagccccgctcgccagaga
agcggagtggacctgggagcttaccagaatgctctggaggaggtcctggcctggctcctg
gccgcggaggagaaactgcagcatcagggagacatctccgacctggtggatgatgtcaag
gaccagtttcatgaacacgagagcttcatgatggagctgacatcccaccagagccgcgtg
gggagcgttctccaggccgggaaccagctgatcatggaggggaagatcacggaggacgag
gaaaacgagatccgggagcagatgagcctcctcaacagccgctgggaggtgctccgcgtc
cagtccatggacaggcagtccaagttgcatgaggtgctgatgaacctgcagcagaagcag
ctggaccagctcgacgcctggctgtccggcacggaacagcgtatcaaggtcatggacacg
cagggcatcgggcccgaccttgaccaggtccgcaggcaggtggaagaacacaagacgctt
caggaaggcttggagactcagcaactgcaggtgaactccctgactcatatggtggtggtg
gtggatgagaacagtcctgagaatgccacccaagccctggaggcacagctgcagaacctg
ggggagcggtgggcctgggtgtgtaagtggacggaggaccgctggatggtgctacaggag
gtgctggtgcgatggcaggtgttcaacctggagcagatggacttccacgactggctgacc
gacaaggaaggggctctgcagaccatgcagcacgccaacctcagcgaccccaacgtcatt
gttgcacaggtcaagaaactaaagattttagaacatgagatggaggccaagcagccgacc
ttccaggtgttgagcgggaaggctgcggaggttgtgcagcatctggaccgctcctcctct
gccgtggaggggattcagggcaagatcgaggagttcacgcagcgctgggatgccattgtg
cagaagatggagaactacagtaaactgatgtctgcctcggctgccgtcccgaagaagacg
accaccatcaccgagacggtcaccaagatgactcagaaactgacccagaaaacaccgccg
ccaccacctcctaagaaagcagtgagccagcagagaaggaggtttgacagcgagatcgcg
acacttcttgcctggatcgacgacacagaggccctgctgttgtcgcccgcctacaccaac
ccagctacctcaaacagcctccaggctcaaaccgacaagttcaaccagctggacgagaac
atcatgtcctatcagggccgcgtacagaccatccaggagaccggcgaaaccctcatcgag
gaagaggatgacaagattcagctggagacgcgcctgaacacgttcatggagcgctggaac
gagatctgcgtgctgatcaacgaccggaagcgaaagcttcagatggcgcgactgtgtaag
cagttctacacggagctggacgtcctgagggacgtcaccgggaggaagatgacctggctg
cagggacaggacaagcccagcgacgatgcagtcaagattaaacagcagatggatgaacta
caggttgaagttacggacatggcagcgcacactaagcagtctgttgaagttactgacatg
gcagcacacagtgagcgtgtagagcagctgaacagcctgggctctcagctggcggactcc
tcagacccgcccaagaacctgcagcaggacctgactcagttccagctgcagtgggaggaa
ctggtggccaagatggccgccagggagaaggacctcaccaaagctcttgagcaggcccct
cctaaacagtacctggaggccatgaaggcgctgacacagtggatcgataacgtggagtct
ctcctcaccacggagaagttctacatcgctgacatccccaccatgaaggatcaacagcag
aagtttaaggaggtacagcaggccctgaaggaccagcagaagagtctggacttcgtgaac
accacggggaagcaggtggtggagagttccccgccggaccggtcccgcggcctgcagaag
gagctgaacgggctgaacgagcgctggagtaacgtctgcgccatgacagaggatcggctg
gaacacctggacaagggggtcgagctcctcacgcaatttcagaaagaaggtgatggcctg
cgtacctggatggatgaggtggatgtgtacatccactcagaagaggcagcagtaggtgac
acagaaaccctacaggctcagctagaacaaagcaagtcccttcagaaggacatcgcctcc
ctccagcacaacatgaacaacgtgaacgaggcggggaagaggctggtgcctgaggcgcac
cccgacttctccaagaaactcaagcaggagctgaaggacctgaacgaacgctgggacgcc
atcaccaagaagcaaaagtctcagaagcagagtcttgagggagcgatgaagaagacgagc
tctttacagctgcagctggaggccttcagcgagtggctgactgacaaggagaaggaggga
ctgaaggaagacgggcctctggaggaccctgatgacatccagcccaggatcaagaaatat
aagaaactaaaagcagacctagacaagaaagaacccgatctgaaggccctgaacaccgtt
ggtaacgagatggcgacgaagactggcagcccgggcggactcggcaatgacctgcaggtg
gtcaacgagagatggactgtgctgtacaacaccgtgaacaagcgctacgaggtttcacag
gaggtgtggaccctgtggcagcagttccaggtgttactagaacaggagcaatcctggctg
tccaccctggagactaagacccaacagactgaggctgtgggcggagatgcagaggaaata
tctgaagctctggatgcccttgagaaccacgtgcggaaccacccgtcagacaacagggac
aagatccaggagatctcccagcagctggtggagcacaaggttctggtggagcctgtacag
acggaggtcacgaccttcacctcacgatgggacactctgcagcaacaggctaagctgcgc
cagacagcccttgagcagcggattgccagtgcccaggacctggagaaggatgtgcttgag
ctggagcgctggttcacacggacagacaagcttctgcactcgcgcatcacctcgggcgtc
tgctcctccgatgtgcctgaggagtttgagcaactacaggacgagtttgatgctcgagac
gaagacctggaggagatcgggcggaaatgtcaggcactgatgacggagggcagcacagag
gccaccaccaggatcaggcagcagtctgagatactgcagaagcgaatggttgagataaag
gcaaagttccgcaagtaccagaagccggcagacttcgagccgaagatgggtcgcgttcga
gacatcctgaacaacgttgagaaggagcttggagtgctggagctcaagcaccatgagcct
gagatggtgcaggggcaactcgacatctgtatgggcctgtacaagatcctgagcgatgtg
aaacctgaggtggagtttgtgataaagactgggcgacaggtggtggagaagagtcaagtg
gacatcacggaggaccttaacgagcggcttaacgagctgaaactccagtataacgacctg
ggtgctcaggtgggtatgctgcgggatcagctggaggggatggtgacggaaggaaaacag
gatcttgagaaggccatgaagctgtctaagaagctaaagaaggagatggtgtcccttacg
gagtggctgggcactaccgaggccgagctcaacaagaaggaggcagagggcgccatcccg
gctaatgttgaagaggaactcaagtggtgcaagacccttcagcaagagatgaccaggaaa
cagtccgtggtgctgattatcaatgagacagggaaggagatggtggaactcgcagggccc
ggcaccctcggtcccctgtag
DBGET
integrated database retrieval system
