KEGG   Branchiostoma floridae (Florida lancelet): 118422418
Entry
118422418         CDS       T01074                                 
Name
(RefSeq) probable helicase senataxin isoform X1
  KO
K10706  ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfo03021]
    118422418
Enzymes [BR:bfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     118422418
    5.6.2.5  RNA 5'-3' helicase
     118422418
Transcription machinery [BR:bfo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     118422418
SSDB
Motif
Pfam: AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 AAA_22 AAA_16
Other DBs
NCBI-GeneID: 118422418
NCBI-ProteinID: XP_035685868
UniProt: A0A9J7LPT2
LinkDB
Position
9:12070209..12094270
AA seq 3283 aa
MSGMQGMPGSCLWCTCPERMQQLLPDSLSSPRPAWLDTVHQDLLYCWDCVLEYHHGREEV
RRARPELAKVLTQKEVARLEETFILSLDHDDNMDDAVSMETLHLPLLEVLKFPYLLLHEK
LAALVERAIQALSRSGRPLILEEKSAGIYLLLVHPNRQIRKWAIKSVRSLGMVHPHQYEE
IEPVVGWLLSVVNFDLFENPGIALDVDDPPCGMEDSVVLPPFLFDTCGYKDYWLGICLLL
SSLDPSTMRTQMFGARGHRHIPDAVLNAMEPQQGMKAGGFWPALQCLVVLFDRLGSRIWQ
FLSHDPATVFSTITKNPLFQTELLRLETCQGRKSSGAMVSSTSKQTPTKSQPSQLPASPS
LFLERYSVKQECDSSCQSSTSFHKQEPIRDIGTGEDDWSSSQPITDSQAVYEAADWSLHQ
TNEAIALRIPEDDFPETKLYSNIPDVLTDQTRATNVHTCAFTWFIPYVSSLIEFGEIAGE
HISASVMFLAEQADHTEHGTPSHQCKLVEQCLMVLLHLLELLVSKDMHRLLLPTCRIWVS
LALKHCTGQKVSNKTMWSLAKHGTHGVNQTCLKLLVNLLKQGVKLRQDDRCVQFLDKLNL
QLLRKRGPDAGDPTSVLLSEVDVQEMQKCMEGILKAKVTSNEFSAIASTSKQSVSTRGSL
AVVLSSLQHGQSEGTEVLPQPIKCEDDSMTSPSAGPSRESFACEDDDVDLLTTSSDDIDL
SEAIKSVQRELDSLNQLEVQKEEDHPFEVSLSVKEEPIDAHEESSKRTPGIKSGTTGKPH
HTKAVMDSDSLLLEELTSLYNESVAQKGSQGMLKGVSLTPTATKKSKARTSPAFNTDTGV
QIKTEHQTGPFDGSSQVSSGSSRLQETEPPIHTARKSFPSSLPVVNRNSSRISSTRVDTT
SPVESTKIRTARKSIMPYIQDGGSKEPLPSSKRSAKDKTSDLQNVCVKLEKEPANVGWNT
VRDKVFDPSDSEDSIILISDDDDDNDEDDDVKDDDDDDIEDRMTKPVKREQEGVHGNRVN
HLHLDLTSSSMQPQVLLRKLSPRTIEAHTSGNKRVPQHCTNWEDSTSDSDQGDYPMPKGR
IGRRKMFSSSSDELSDIDSVPLSTLAQMSSTKADSDIISISDSDEEPSSPDREPQGTSAS
RNTSKVGDRWKQKILTKRRRNVILCDSSDVEENVTKPSLQQAVKMEKDPLASPGMQRKIK
SKVSRLFGDSSSESEGEKGHESIKEQCRDIPPSGTTNVTNQEKSRETVSSKCSNQEMGQR
PLFKPEKTTPVSSRIFNKLSLKCRQIASQHSTQDSQASWQPGQCKSQPSVSLERRTTTKS
GSTVDKYGDEGSIKHQTDIIDRFAFHASDSEDSTGVTVGSGKSAIWSKVQESPLKISTSV
ASKIRCQLLQNQHRSSDDNQRKEQTDDANKGSHSSKEPKEGAELELTDMELLAAADEKNS
GTDSQEDTLAAFLADDNAEDHAYLMESSDQAWMDSESERDERQKSFNTKKFYKSGRKDVE
STSQDSSTTLKRKESHLDNISSSAVAPGRKTAENNTNKKRKIGDQECGSTITSKSRHTSR
EAAHPLADTWHREDALEATNNVENDDNIDYDEPVYFDFDLDEVPEEEQEHFLAEKFASSQ
ETPKKTTAHKKKSQHVQASKKLIHGKGGKRAKTAARLRLTSRSTMLTETMIQTRPHSKVN
ADRVGPARTSASQSSSLQTITNQSRALETSDGQSARISTNQAEPAQTGSNQSEAPEAEPE
SASDKTAITQVSATTPFASYQQKPAVVKKPVIKELPAPKVDPSKPINPDYFLTCILQWNP
QQMEGSSRKELPIPCHDLQPIPQMFGSFDDYLKTFTPLLLLETWEMICKEWESANSKGPI
AKMKLTVGTCFEARCLQLIHTQTLLKKQAPSPSEGDLLVLSSAWRGDLGQEGLTQAFGVV
EKVTKQPNIGGSYDYWKLTVCIKVNGTTFPVTEGQTITIQPVTSLVACQRQWSGLTFLHR
SLLARDILRPRGPSVFAVDTDPSQRAHVVGRYNPMQRAAIAGAAHSALRPFPLPRICLLQ
GPPGTGKSHTIVGLVKKIIQAGETPPDGNPPTPQNSKPRVLLCAPSNAGIDELVRRMIRD
VHEGEEEKENKRRFYKGNCGDLNLVRLGRPASIHPDAQGFSLDNIVEKQLQSFTKEVESS
KERHIVVQLTALDVKIADLERECGMQRLMGNTQKQREVERKRDALQAQRDKLDKTNRQVQ
LKNEERHREGTKIRQRVLMDADVVCCTLSASGSNMLEQAITKAGVARSIHFTCVIIDEAG
QCNELDALIPLQYGMSKLILVGDPEQLPATVLSKKAQDLNFRQSLFERLYRVFKPRPDNP
VLMLNTQYRMHPAICGFPSYNFYSGKLRTDKDVAEDRRRCSFKPYVVFNMLDGREQESRM
KAGGIYNHTEAVMVAQLVIALKENPAIDTRNIGVITPYQKQKWLIETQLIRSGNNQVEVG
TVDGFQGREKDIVILSCVRACSSSGSIGFLCHRQRMNVALTRAKFCLYVVCHEASLRTNL
DWHSCMEDARRREVLVDVKGLGSEEDFHQLGRAARLNVKKLCPRPGPSAITHEENKQVQE
RRGENDTKLKKGKTAKEKPGSQHTATLKKSMQSKGGKEQRHESDIPAHSKKGKHYEKKSS
RDCPTSSKGKTTNAAKGSSQEGRKYAAEAGRKVSAKARKGEATKSSSVNSSSKESSKGHE
KASKSTGHRKNVAHNKHKTSERTSTVTTKHGTTGRHDGKKRLPAQGKNKLSGFKIPKVVV
TSTQESVQSKSVKETPTATSSGKETPATSSLVKETTTAVSTIKETTATTSTASTSRGQVF
PLDSILGQMSSATKEDDVVANGFGSGAGISNDDVSLRNGSKEDSHSVHTADKANSGAVEN
RQALKRRGDKTDDNLRHFKIPRRNSQDVVHVPANTSDGSRQSSSQAKIGTNNNKPCPVDT
RGHTGQSSKVMSDSQQGGHRARVGSVGGQDTDQREVNHLRRGQHAKHTIQQENSSNIRST
IVSRTDASGRIVRTRWEKLKSVLKSPTRRTSKRLKVTFDSSIVNTPSNTRELTNYCGSYE
ARMAEMKSLPNTTRSDVGSFVPDEADNFRNTQAFQRRGALSVTVNTQSGGRAAQLSHSES
ELPELSSTQSPLKDQDRSFNHSLRGNPSQEAAVGNVRTGGSSARSGNQTKLTSSHQIASD
PSPRSGAQGNRIRISNFVPAATTRRDSNGTVTFQNHMASASHQRERGENNSSSGTRSNYP
SIITGQIARIPHSSSTSNPAVSGNSTRDPRLARVHRGAMIQPP
NT seq 9852 nt   +upstreamnt  +downstreamnt
atgtctggaatgcagggcatgccggggtcctgcctgtggtgcacctgcccagagcgtatg
cagcagctgctcccggacagcttgtcgtccccgcggccggcgtggctggacacggtacac
caggacctgctgtactgctgggactgtgtgctggagtatcatcatggcagggaggaggtc
aggagggcaaggccagagctagcaaaggtcttgacacagaaggaagtggcaagactggaa
gaaactttcattctcagcttggatcatgatgacaatatggatgatgctgtttccatggaa
acactacatctacccctgttggaagtgctgaagttcccttacctcctgttgcatgagaag
ttggctgccctggtagaacgtgctatccaggccttgtccaggtccggccggcccctgatt
ctggaggagaagtcagcagggatctatctgctgctggtacatcccaacagacagataaga
aaatgggctatcaagtcagtgcgctccctgggcatggtccacccgcatcagtacgaggag
atcgagcctgtggttggctggctgctgtcagtggtgaactttgacctgtttgagaaccct
gggatagctctggatgtggatgaccccccctgcgggatggaggactctgtggtcctgcct
ccattcctgtttgacacctgtggctacaaggactactggctaggcatctgcctcctgctg
tcctccctggacccctccaccatgaggacccagatgtttggggccaggggacacaggcac
atccctgatgcagtcctgaatgccatggagccacagcagggtatgaaggcaggtggtttc
tggccggcgctgcagtgcctggttgtgctgtttgaccggctgggttcacggatctggcag
ttcctgtcacatgacccagcaacagtcttctcaaccatcaccaagaacccactgttccag
acagaacttctcaggctggaaacatgccaggggaggaagagcagtggtgccatggtttct
tcaacatccaaacaaactccaactaaaagccagcccagccagttgcctgcttccccttcc
cttttcttggaaagatattcagtgaaacaggagtgtgatagcagctgccaatcatcaacg
agctttcataagcaagagccaatcagagatattggtacaggagaagatgactggagcagt
agtcaaccaatcacagacagtcaagctgtgtatgaggctgctgattggtccctgcatcag
accaatgaagccattgctctcagaatacctgaggatgactttccagagaccaaactttac
tccaacattcctgatgttttgacagaccaaacaagggcaacaaatgtgcatacttgtgcc
tttacctggtttatcccatatgtaagctcacttattgagtttggtgaaatagcaggagag
cacatatcagcgtcagtaatgttccttgctgagcaggcagaccatactgagcatgggact
ccctcacatcagtgtaaactggtagagcagtgccttatggtattgttgcatcttcttgaa
ctgttggtgtccaaagacatgcacagactgttgttgcctacttgtaggatctgggtttca
cttgccttgaaacactgtaccggtcagaaggtgtcaaacaagacaatgtggtcattggct
aaacacggcacacatggagtcaaccaaacatgcctcaagctgctagtgaaccttttgaag
cagggagtgaagctccggcaggatgacagatgtgtgcagtttctggacaagctgaacttg
cagttgcttagaaagagaggtcctgatgcaggggacccgacttctgtactactgtctgag
gttgatgtgcaggaaatgcagaagtgcatggaagggattctgaaggcaaaagtaacatca
aatgaattttctgccattgcaagcaccagcaagcagtcagtgtctaccaggggatcatta
gcagtagttctgtcttccctacagcatggccaatcagaaggcacggaagttctgccccag
ccaatcaaatgtgaggatgacagtatgacgtctccatctgctggtccatccagggaatca
tttgcttgtgaagatgacgatgtggaccttcttactacctccagtgacgacattgacttg
agtgaagcaataaagtctgtacagagagaattggatagtctaaaccaacttgaagtacag
aaggaagaagatcacccgtttgaagtatcattgtcagttaaggaagagccgatagatgct
catgaagagagcagtaagagaactcctggaatcaagtctggaactacaggtaaaccccat
cacaccaaagctgttatggactcagatagcctactacttgaagaactgacaagcttatac
aatgagagtgtagctcagaaaggctctcaaggaatgttgaagggagtatctctcactccg
actgcaacaaaaaagtccaaagctagaaccagcccagctttcaacacagacacaggagta
cagattaaaactgaacaccagactggaccctttgatgggagttcccaagtgtcttcaggt
tcatccagactgcaggaaacagagcccccaattcatactgcacgtaaatctttcccatcc
tccctaccagttgtcaacagaaattccagtagaatttcctcaactagggtagataccacc
tcaccagtggaaagtaccaaaattcgaactgcaaggaaaagcatcatgccttatatccaa
gatggtggaagcaaggagcctttaccttccagcaagagaagtgccaaagataagacttct
gacctacaaaatgtttgtgtcaaattagagaaagaaccagctaatgttgggtggaacaca
gtcagggataaggtctttgatccctcagattcagaagattctatcattctcatcagtgat
gatgatgatgataatgatgaagatgatgatgttaaagatgatgatgatgatgacatagag
gaccgaatgacaaagcctgtaaagagagagcaagaaggtgtgcatgggaacagagtcaac
caccttcatttggacctgactagcagtagcatgcagccacaagtcctactgaggaaactc
tcacctcgcacaattgaagcacacacatctggtaataagagggtcccacaacattgtaca
aactgggaagactccacatctgacagtgaccagggtgattatcccatgcctaagggaagg
atagggagaaggaagatgttcagtagcagcagtgatgagttgtcagacattgactctgtc
cctctatctacccttgcacaaatgtcttccacaaaggcagacagtgatatcatcagcatc
tctgactcagatgaggagccttcctcaccagacagagaaccccagggaacatcagcctct
agaaatacaagtaaggttggagacagatggaagcagaagatcctgactaagaggaggaga
aatgtgatcctgtgtgatagcagtgatgtggaggagaatgtgacaaagcccagcctgcaa
caagctgtgaagatggaaaaagacccacttgccagtccagggatgcagcggaagatcaag
tcaaaagtgagcagattatttggtgactccagctcagaatcagagggtgagaaaggtcac
gaatcaatcaaggagcagtgcagagacatccctccctctggtacaacaaatgtaactaac
caggagaagagtagagagactgtgtcatcaaaatgctcaaatcaagaaatgggacaaagg
ccattgttcaaaccagaaaagaccacacctgtgtcctctagaatctttaacaaactgtcc
ctgaagtgtagacagatagccagccagcatagcacccaggatagccaagccagctggcaa
cctggtcagtgtaagagccagccaagtgtaagtcttgaaagaagaacaaccactaagtca
ggcagcactgttgacaagtatggtgatgaaggcagtattaaacaccagacagacataatt
gacaggtttgccttccatgcatcagactcagaggactctacaggggttacagtgggctct
gggaaatcagcaatatggagcaaagtgcaggaatcccctcttaagataagtacctctgtg
gcaagtaaaatcaggtgtcagcttttgcaaaaccagcaccggtcatcagatgataaccag
agaaaagaacaaactgatgatgccaacaagggatctcattcatcaaaagaaccaaaggag
ggagcagagttagaactaactgatatggagcttcttgcagcagccgatgagaagaactca
ggaacagattcccaggaggataccctggctgctttccttgcggatgacaatgctgaggac
catgcctacctgatggagagtagtgatcaggcctggatggacagcgaatcagagagggat
gaaagacagaagagcttcaatacaaagaagttttacaagtctggcagaaaagatgttgag
tcgacatcacaagactcctccactaccctaaagaggaaagaaagtcacctggataatata
tcctcttctgctgttgctcctgggagaaaaacagcagaaaataacacaaacaagaagagg
aaaataggagatcaggaatgcggttctacaattacaagtaaaagtagacatacaagccga
gaagcagcacatcctcttgctgatacttggcacagagaagatgccttggaagcaacaaac
aatgttgagaatgatgacaacatagattatgatgagcctgtttactttgactttgacctt
gacgaggttccagaggaggaacaggaacatttcctggcagaaaagtttgcctcctcacag
gagacaccaaagaagacaacagcacataagaagaagagtcagcacgtacaggcatcaaag
aaacttatacatggaaaaggagggaaaagggcaaagactgcagccaggcttcgtctgaca
tctcgtagcaccatgctgacagaaaccatgatccagaccaggccacacagcaaggtgaac
gcagatagggtgggaccagctcgaaccagtgccagccagtcaagctcacttcaaaccatt
accaatcagtcacgtgctcttgaaaccagtgatggccaatcagctaggatcagtaccaac
caggcagaaccagctcaaactggtagtaaccaatcagaagctccagaagctgaacctgaa
agtgcctcagacaagaccgcaatcacacaggtctcagccactacaccatttgcctcatac
cagcagaaaccagctgtagtaaagaaacctgtaataaaggagctgcctgcccccaaagta
gatcccagcaaacctattaacccggattacttcttaacctgcatcctgcagtggaaccca
cagcaaatggaaggatcaagcaggaaagagttacccatcccttgccatgacctgcagccc
atacctcagatgtttggctcgtttgacgactacctgaaaacattcacacctctcctgttg
ctggagacatgggaaatgatttgtaaagagtgggagagtgccaactccaaaggacctatt
gccaagatgaaacttactgtggggacctgttttgaggcacgatgtcttcaactcatccat
acccaaaccctgttgaagaaacaagcccccagcccttctgaaggtgaccttctggtgttg
agttctgcctggagaggagaccttggacaggagggtctcacacaggcatttggtgtggtg
gaaaaggtgaccaaacagccgaatataggtggaagttatgattactggaagctgactgtt
tgtatcaaagtcaatggaactaccttccctgtgacagagggtcagactatcactatccag
ccagtgacatcattggtggcatgtcagcgccagtggagtggtctgacgttcctccaccgc
tccctgctggccagggacatcctccgtcccaggggaccatcagtcttcgctgtcgacaca
gatccttcccagagagcacatgtggttgggaggtacaaccccatgcagagggctgccatc
gctggtgcagcccactcggcacttcggcccttccccctgcccaggatctgtctgctacag
gggccgccgggaacagggaagtctcacaccatcgtgggactggtcaagaaaatcatccag
gctggcgaaacccccccagatggtaacccccctaccccacagaactccaagccccgtgtg
ctgctgtgtgccccctccaatgccggcattgatgagctggtgcggcgcatgatccgagat
gttcatgaaggggaggaggagaaggaaaacaagaggaggttttataaagggaactgtggg
gacctgaaccttgtccgtctgggccgcccggcctccatccacccagatgcacagggcttc
agcctcgacaacatcgtggaaaagcaactccagtcattcaccaaagaagtagagagcagc
aaggagaggcacattgtggtgcagctgacagccctggatgtgaagatagcagacctggag
agggagtgtggcatgcagcggctgatggggaacacacagaagcagagggaggtggagagg
aagagggacgcactgcaggcacagagggacaaactggacaagacaaacagacaggtccag
ctgaagaatgaggaacggcacagggagggaaccaagatcagacagcgggtactgatggac
gcagatgtggtctgctgcaccctcagtgccagtggatccaacatgctggagcaggccatt
actaaggcgggggtggccaggagcatccactttacatgtgtcatcattgatgaggctggc
caatgtaatgaactggatgccctgatcccattgcagtatgggatgtccaaacttatcctg
gtaggagaccctgaacaactgccagcaactgtgctgtccaagaaagcccaggacttgaac
ttccgccagtccctgtttgagaggctgtaccgtgtcttcaaacctcgaccagacaaccca
gtgttgatgttgaacacccagtacaggatgcacccagccatctgtggcttcccttcctac
aacttctacagtggaaaattgagaactgataaagatgtggctgaagatcggcgccgctgc
agttttaagccatatgtcgtcttcaacatgctggatggacgagagcaggagagccgtatg
aaggccggggggatctataaccacacagaggcagtgatggtggcacagctggtaatagcc
ctgaaggagaaccctgccatagacacacgcaacattggagtcatcacaccctaccagaaa
cagaaatggctcatagagacacagctcatcaggagtggtaacaatcaggttgaggtcggc
actgttgatggatttcaaggtcgtgagaaggacattgtcatcctgtcgtgtgtacgggct
tgcagtagctcgggaagtatcggtttcctgtgtcatcggcagcggatgaacgtggcgcta
acccgtgccaagttctgtctctacgtcgtctgtcatgaagcctcactcaggactaacctt
gactggcactcatgcatggaagatgctcggagacgggaggttcttgtagatgtgaaaggc
ctcggctctgaggaggacttccaccagttgggtcgagcagcccggctcaacgtgaagaaa
ctctgtcccaggcctggcccatctgctatcactcatgaggaaaacaagcaggtgcaggaa
agaaggggagaaaatgacaccaagctgaagaaaggcaagactgctaaggaaaaacctggc
tctcaacacactgcaactctgaagaagagtatgcaaagtaaaggaggtaaagaacaaaga
catgaaagtgacattccagcacatagtaagaaaggcaaacactatgagaagaaatcatcc
agagattgtccaacatcttcaaaaggcaagacaacaaatgcagcaaagggctcctcacag
gaaggtaggaagtatgcagcagaggctggcaggaaagtgtcagcaaaggctagaaaagga
gaagcaaccaagagctcttctgtcaacagttcatcaaaagagtctagtaaaggacatgag
aaagccagcaagagtactggccacaggaagaatgttgctcacaacaaacacaagacaagt
gaacgaacctccacagttacaaccaaacatggaacaacaggaagacacgatgggaagaag
agactgccagcacaggggaagaacaaattgagcggattcaaaataccaaaggtggtggtc
acttctacacaagagtcggttcaaagcaagtcagtgaaagaaactcctacagccacatct
tcagggaaagaaactcctgctacatcttctttggtgaaagaaactaccactgcagtgtct
acaataaaagaaactactgccacaacatcaacagcaagtacatcaagggggcaagtcttt
cctcttgattctattcttggtcaaatgtcttctgccaccaaagaggatgatgttgttgcc
aatgggtttggttcaggggcaggaatctccaatgatgatgtatcgctacgtaatggctcc
aaggaggattcacatagtgttcacacagctgacaaggctaattcaggtgctgtagagaac
agacaggcactgaagaggagaggggacaaaactgatgataatctcaggcacttcaaaatc
cccagaaggaacagccaggatgtagtccatgttcctgcaaatacttctgatgggagcaga
cagtcaagtagccaagcaaagattggcacaaacaataataagccctgccctgtggatact
aggggccatacagggcaaagctccaaagtcatgtcagactcacaacaaggtggtcacagg
gctagggttggatcggtgggagggcaggatacggaccaaagggaagtgaaccatctgcga
agagggcagcacgccaagcacacaatacagcaggaaaacagctctaacattcgatctacg
attgtgtccagaacagatgcatctggaaggattgtcaggaccaggtgggaaaagttaaag
tcagttttgaaatcacccaccagacggacatctaagagactgaaagtaacctttgactcc
tctattgtgaataccccatctaacacccgagagttgacaaactactgtggaagttatgag
gcacggatggcagaaatgaaatctcttccaaacacaacgagatctgatgtgggctcattt
gtgccagatgaagcagacaatttcaggaacacacaagctttccaaagaaggggagctctg
tcagttactgtcaacacacagtcagggggcagagctgcacaattatcacactcagagtca
gaactaccagaactctcttctactcagtctccactgaaagaccaggacagatcattcaac
catagcttgagaggcaatccaagccaggaggctgcagttggcaatgtaaggacagggggc
agctctgctaggtctggcaaccagacaaaactgacatccagccatcagatagcctcagat
cctagtccaagatcaggggctcagggtaacaggatcaggatcagcaactttgtacccgca
gcgacaactcgcagggattcaaatggcactgttacattccagaaccacatggcatcggcc
agtcaccaaagggagagaggggagaacaatagtagctcaggtacgaggtcgaactatccc
agtattatcacaggccaaattgcgaggatcccacacagcagtagcacatcaaaccctgcc
gtgtcaggcaactccacacgggacccacgtcttgcccgagttcatcgaggcgccatgatc
caacccccctga

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