Branchiostoma floridae (Florida lancelet): 118422667
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Entry
118422667 CDS
T01074
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118422667
03041 Spliceosome [BR:
bfo03041
]
118422667
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118422667
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118422667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
118422667
NCBI-ProteinID:
XP_035686235
UniProt:
A0A9J7LQC5
LinkDB
All DBs
Position
9:complement(11191211..11222495)
Genome browser
AA seq
1552 aa
AA seq
DB search
MAGMEAVRSFNNELSSIYECKPPISRAKMTAVTKAAIKAIKFYKHVVQSVEKFIQKCRPE
YKVPGLYVIDSIVRQSRHQFGADKDVFAPRFAKNVTLTFQHLFKCPPEDRARVVRVLNLW
QKNHVFKVEVIQPLLDMADPERAKQMQPAEPEQGKHTQATTPQPSSSSTSMAPIGETAAV
PEPADPLKAVQQLLLGGAPPVQQAVPSTEQLQQLLQLQQSLQKTLQQAHTTGMMAGPGGA
PSTATPPKPKGFNKALLDDFDYGDEDEEDSRDAGKYQTPQEPPQPTPPQHQHSVQSILAS
LPNADLLQQLQKQLAQAQTSQASGMPSAAPAPFPDFLKQQVLQQQQDEFDKEIQQVSHHL
QPPKEPPSQGAPPQMQPPPNQGPPQMPMGLPPGMGFPPNIPPPGQFPQGAFPPGMPPRFP
PPGMPPPQQSFLQGNQAQRPPPFNDVPPPAQQLQHGREEQQQVFEEPSWDRERERPPSSP
TKDREKESRDQDRSSKDRATSRSRSRRSRSRDRDRDRDRRRSRRSRSRSRDRRRRRSRSR
SAERRRKEREEDRERERDREREREREKKGLPPVKKKSLCICSTTLWVGHLDKKTTDVELR
NIFEAIGPVQSIDLIPPRGCAYVCYETRLDAHNALNKLKNLRVGNRQQPVQMAWAPGKGV
KGKEHKQYWDDHAGTTYLPWEKLEGKDLESLAEGGYIDNETLPPDQKKDVAPSESGSQES
QEQKKDLGEMSQDELLALVPDKPPAASQPAAATSIPEMPASIAQIPVMPNPAVVPAMMPG
LMRPMGFPQGVPPPGFPAFNPAVPPPGMAPFAAMPPTFNPNQPPPGMPQMVPPPSVPPSS
SAAPTSSTTSSGPNPLTPAQAVAVSTVTSLINQQREQQQNSGFGLMRPMQNAPGMGGAGA
TPGRPPLLNTPSGMGLMQQNQAVRPGLNQALANAMNQMNQSQQNAGFNAGQVTPTKDRPD
SSPFPDEKTSPGPFSPRQPGGPMQNQFRSPTPGMPGQMQGGLNQPRPMGRGQPPNQMQGL
PFGQQGNLPGMRMNVPSPIRTSGPSGMPANANTTMAQQMPMSSGAPMTPSNMANARGMAP
GGIAGPRPLVAGLAVGGQPRPLLASPRMQGPPGMMPQAGIMGPGIRNMMPGQRMQIRMGM
RPGMPGQLIPGMQGPGGPMAFNQQGPMRFQGQNRPTGPPQGPMGGFRGPRPLLGNPLGGI
GGEGGPNFRGPGEGRVSRFEDKDPVMNNLGAGDIDERFAEGPPGQKRPMEDGQEPFEPEG
RDWKRGRDERWGRGGFHDRDDRERDRDFRDRGREVRDRDHRENNWRREDRDQMDDAEPGA
SGERRGSFFRRADRDRDHDHRSRFDSRDRSRERRDSDGRDRRESEKRDSAGRSRQDSRSN
DKQPPKEVGKGDNLRSRLLNLAHMPQSAKNNAEDKAEAKPQENDIKEDHSVPKDLPPVKD
EVMSEEKKEDPPVKKEEPIEKPVVPVANQPEPVVKELAVKEEVKAEPPVMSEPPVMPEVP
PVVENKPAVKTEDVPVVKEVLDTPIPDPIESNSVPKPEIVPDPVPTKEVEAE
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggccgggatggaggccgtacggtccttcaataacgagctgtcctctatttatgagtgc
aagccacctatctcccgggctaagatgacagctgtcaccaaggcagctatcaaagccatc
aagttttacaagcatgtggtgcaaagtgtagagaagttcattcagaagtgtcgcccagag
tacaaggtacctggtctgtacgttatcgactccatcgtacgccagtcgcgccaccagttt
ggagcagacaaggatgtttttgcacctcgcttcgcaaagaatgtcaccttgacgttccag
caccttttcaaatgtcccccagaggatagggctcgggttgtgcgtgtgctgaatctgtgg
cagaagaaccatgtgttcaaggtggaagtgatccagcccctgttggacatggctgaccca
gaaagggccaaacagatgcagccagcagaaccagaacaggggaaacacacccaagccaca
acaccccagccttcctcctcctccacatccatggcaccaataggagagacagctgctgtt
cctgaacctgctgaccctctcaaggctgtacagcaactgttgctgggtggggccccacct
gtacagcaggctgttccctctacagaacagctgcagcagctgctccaactgcagcagagt
ctgcagaaaaccctgcagcaggcacacactactggcatgatggctggccctggtggagcc
cccagtacagcaacaccacccaaacctaaaggctttaacaaggctcttctagatgacttt
gattatggagatgaggatgaggaggacagcagggatgcagggaagtaccaaactcctcaa
gagcctcctcagcccacccctccccagcatcagcacagtgttcagagcatcctggccagt
ctgcccaatgcagatctcctccagcagctgcagaaacagttagcccaggcacagacatct
caggcctctggtatgccctccgctgcacccgcgcccttcccagacttcctcaagcaacag
gtcctccagcagcagcaagacgagttcgacaaggaaatacagcaggtctctcaccactta
cagcctcccaaggagcctccttcccagggtgcaccaccccagatgcagccgccaccgaac
cagggtcccccacagatgcccatgggtctgccccctggcatggggttcccccctaacatc
ccccctcccggccagtttccgcagggggccttcccgccgggtatgcctcctaggttccct
ccacctgggatgcctcctcctcagcaatccttcctacaggggaaccaagcacagaggccg
cccccatttaacgatgtcccaccaccagcacagcagctgcagcatggccgggaggaacag
cagcaggtatttgaggaaccttcctgggacagggagagagagagaccaccctcctcaccc
accaaggatagggaaaaggagagcagagatcaggataggtcttcaaaggatcgtgcaaca
tcaagaagcagaagtcgtagatctcgttcacgtgaccgcgatcgggacagagatcgccgc
aggtcacgaaggtcgagatcacggtcgcgggaccgtagacggaggaggtctcgttctcgg
agtgcagagcgtcgcaggaaggagagagaagaagatcgggagagggaacgtgatcgagag
agggaaagagaaagagagaaaaagggattgcctcctgtaaagaaaaagtctctctgtatc
tgcagcactaccttgtgggtaggccacctggacaagaagacaacagatgtcgagctgcgc
aacatctttgaagcaatcgggcctgttcaatctattgatttgattccacctcggggatgt
gcatacgtctgctatgagaccaggcttgacgcacacaacgctctcaacaaactcaagaac
ctgcgggtgggcaacaggcagcagccagttcagatggcatgggctccagggaaaggagta
aaggggaaggagcacaagcagtactgggacgaccatgcagggacaacgtacctgccgtgg
gagaaactggagggcaaagacctcgagagcctggcagaggggggctacattgacaatgaa
accctgccccctgaccaaaagaaggatgtggctcccagtgagtctggcagtcaagaaagc
caggagcagaagaaggacctgggtgagatgtctcaagacgagctgcttgccctggtacct
gacaaacccccagctgccagtcagccagcagcagccacctccataccagagatgccagcc
tccatagcacagatccctgtcatgcctaaccctgctgtggtaccagccatgatgcctggg
ttgatgcgacccatgggtttcccacagggggtaccacctcctgggtttcctgccttcaac
ccagctgtcccacctccagggatggcaccttttgctgctatgccgccgacgtttaacccc
aaccaacctccccccggtatgcctcagatggttccacccccatcggtgccgccaagtagc
tcagctgctccgacatcgtccaccacctcctcagggccgaaccccctcaccccggcacag
gcagtcgcagtcagcaccgtcacaagcctgatcaaccagcagcgagaacagcagcagaat
tctggcttcggtttgatgcgacccatgcagaatgcgccgggtatgggaggtgctggtgcc
acaccaggccggcccccgctgctgaacacaccctcggggatggggctgatgcagcagaac
caggctgtacgcccagggttaaaccaggcacttgctaacgcaatgaaccagatgaatcag
tctcagcaaaatgctggtttcaacgcagggcaagtgacaccaacaaaggatcgaccagac
agcagcccctttcctgatgagaagacatcgccgggtccgttcagtccgaggcagccgggc
gggcccatgcaaaaccagttccgcagcccgacgcccggcatgccaggccagatgcagggt
gggctgaaccaaccacgaccaatgggccgcggccagccacccaatcagatgcaagggctg
ccattcgggcagcaggggaacctcccagggatgcggatgaatgtaccaagccccattcgc
accagcgggcccagcggaatgcctgccaatgccaacaccactatggcccagcagatgccc
atgtcctcaggagctcccatgacaccctccaacatggccaacgctcgtggcatggcacca
ggaggtattgcaggtcctcgtccactggtagcagggttagcagtaggtggacagcccaga
cctctcctagcaagtccccgtatgcagggcccaccagggatgatgccccaagctggtatc
atggggccggggatcaggaacatgatgccggggcaaaggatgcagatcaggatggggatg
cgaccgggcatgccgggacagttgatcccaggcatgcaaggacctggtggtcccatggcc
ttcaaccagcaggggccaatgagattccagggacagaaccggccaacaggaccaccacaa
ggcccgatgggaggattccgtgggccgcgccctcttctgggtaaccccttgggagggata
ggaggggaaggaggaccaaacttcagggggccaggggaaggcagagtctcccgatttgag
gataaagatcctgtaatgaataacttgggggcaggagacattgatgaacgttttgcagag
ggtcccccaggacagaagcgtcccatggaggatggacaagaaccgtttgaaccggaggga
cgggattggaagagaggtcgcgatgagaggtggggacggggaggtttccatgatcgtgat
gaccgcgaaagggacagagatttccgtgatcgtggtagggaagtgcgcgaccgtgatcat
cgggagaataactggcgtcgtgaggaccgtgaccagatggatgatgcagaacctggtgcg
agtggagaaagaagaggaagtttcttccgtcgcgcggatcgtgatcgtgatcacgatcat
aggagccgctttgacagcagagaccgtagcagagagagacgggacagcgacggtcgagac
cgacgggaaagtgaaaagcgagacagtgctggccgttcccgacaggattctaggagcaat
gataaacaaccacccaaggaggttggaaaaggagataacctaaggtcaagactattgaat
cttgcccacatgcctcagtctgctaaaaacaatgcagaagacaaggctgaagcaaaaccc
caagaaaacgatatcaaagaagaccactcagtccctaaggacttgccaccagtgaaagat
gaagtcatgtcagaggaaaagaaggaagatccacctgtgaaaaaggaagaaccaattgaa
aaaccagttgtaccggttgcaaaccagccagagccagtggtaaaggaactggcagtaaag
gaagaagtaaaggcagaaccacctgtcatgtccgaaccacctgtcatgcctgaagttcct
ccagtagttgaaaataagccagctgtaaaaacggaggatgtccctgtcgtaaaggaagtg
ctagacactcccatacctgaccctatagaatccaactcagttcccaaaccagaaattgta
ccagacccagtcccaaccaaagaagtcgaggctgaataa
DBGET
integrated database retrieval system
