Branchiostoma floridae (Florida lancelet): 118423250
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Entry
118423250 CDS
T01074
Name
(RefSeq) pre-mRNA-splicing factor SYF2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118423250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118423250
Spliceosome [BR:
bfo03041
]
Complex B
Other components
Prp19-related factors
118423250
Complex C
118423250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Imm49
Motif
Other DBs
NCBI-GeneID:
118423250
NCBI-ProteinID:
XP_035687222
UniProt:
A0A9J7LQI4
LinkDB
All DBs
Position
9:complement(4538250..4545446)
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AA seq
236 aa
AA seq
DB search
MASASCSTSEPTSSGSMSAADRRAQRMAKLQELSLKRNEARKLNHQEVVEEDRRNKLPAN
FEQKRKREEWKEEDEKKRKEAEERGEDYDRLRMLEWTAEEVEKWERKKKKKNPDPGFSTY
EAAGLRQYQALTKKMKPDMEHYQQQRDKMGEKFYPDMNTLVDVTRKDSDEAVDRLVADVE
KQIDKRAKFSRRRGFNDDADIDYINERNMRFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcttcttgcagcacgtcagagccaacctcttcagggtccatgtcagcggca
gacagaagagctcagcggatggccaagctacaggagcttagtctcaagaggaatgaggcc
agaaagctgaaccaccaggaggttgtggaggaggatcgtaggaacaaacttcctgccaac
tttgaacagaagaggaagagggaagagtggaaggaggaggatgagaagaaaagaaaggag
gcagaagagaggggtgaagactacgacaggctccgcatgttagagtggacagctgaggag
gtggagaaatgggagagaaagaagaagaagaaaaaccctgatccaggattctcaacgtat
gaagcggcaggactccgacagtaccaggccctgactaagaagatgaaaccagacatggaa
cactaccagcaacagagggacaaaatgggtgagaagttctaccccgacatgaacacactg
gttgatgtaacaaggaaggactctgatgaagccgtagacagactagtagcagacgtggaa
aaacagatcgacaagagggccaagttcagcagaagacgcggattcaacgacgatgcggac
atcgactatatcaacgagcgtaacatgcgcttcaacaagaaggcggagcgtttctacgga
aagtacactgccgagatcaaacagaacttggagagaggcaccgccgtgtag
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