Branchiostoma floridae (Florida lancelet): 118423441
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Entry
118423441 CDS
T01074
Name
(RefSeq) contactin-3-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118423441
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bfo00537
]
118423441
Cell adhesion molecules [BR:
bfo04515
]
Immunoglobulin superfamily
Contactins
118423441
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bfo00537
]
Others
118423441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_MYOM1
Tcell_CD4_C
DUF7290
C3orf18_N
SIT
Motif
Other DBs
NCBI-GeneID:
118423441
NCBI-ProteinID:
XP_035687485
UniProt:
A0A9J7N134
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Position
9:complement(10493978..10503208)
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AA seq
639 aa
AA seq
DB search
MGFQIRLLSLLLSSVFVTFALNGDSADDSRQGPPERDAHPRERIAYRTDLAILPCTARRR
SSTTTYSSDRDDVKMTHWHQPPNIPDINNNNDRLYEWKKDDQEVILTPSKYKIVDGELHI
LSPRRPDDEGKYQCIAYNEDGAKISLPTYLRIAYMEPFEPTVRLPIVVNEGDTFRIRCVP
PDHYPSGKYNWYKDVPHQLVQQDKRIFISNKNGDLFFRYATLQDSGNYSCVLSDDHPSHG
YYIVHSPATSVVVRPGSITSRPPHVVLSPEIVHAVEGQTVTMQCFDDAYPVSKTVWKRRV
RKEDIDELPLPRNAVLQSHDHLLVLPDVRRESAGYYFCEVENELGRSNILARLSVNVPAK
VTSLGKDIPLRLGNDVTLEATFEGTSPVTVTWYRNANEVVTNSKYVIKGDALTITDLRFT
DRGRYQCMVQNEYGADQVFFNLVAVEPTIVKPMKDAQTAILGETATVVVRWEASPPFMIN
WRQRDTTVVTMNMDDKRAVLVTIINHRMNVTKEGYLSINDVTAADEGNYTFSVSNQFGHT
EASNQLLVIAPPTAQSASNIPLLAVGAILALLIIVGAAVVVWVVMKRRRDRVSSPIRPDA
AIVRPNADEAFRVRLYIDDNVAVNEDFGTDDTRALTEDL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggcttccaaatcagactgctgtcgctgttgttgtcttccgttttcgtgacctttgca
ttgaatggagattctgcagatgattcaagacagggcccgcccgaaagagatgcacatccc
cgagagagaatcgcctacagaacagaccttgcaatcctgccttgtaccgcaaggaggcgc
tcctctacaacgacctattcgagcgatcgcgatgatgtaaagatgacgcactggcaccag
ccgccgaatatcccggatataaacaacaacaacgaccgcttgtatgaatggaaaaaggac
gaccaggaggtgatattgacgccatctaagtacaaaatcgttgatggagagctgcacatt
cttagtccgaggagaccagacgacgagggaaagtaccaatgtatagcgtacaacgaggac
ggcgccaaaataagtctaccgacataccttagaatagcatatatggaaccatttgaaccg
acggtccgactgcctatcgttgttaatgaaggagacaccttcagaataagatgtgtacca
ccggaccattatccatccggaaagtataactggtataaggacgttcctcaccagttggta
caacaagacaagcggattttcatctccaacaaaaatggagacctcttcttcagatacgcc
accttgcaggactctgggaactacagctgtgttctgtccgatgaccacccttctcatggc
tactacatcgtacacagtcctgcaacgtctgtcgttgtcaggccgggaagcatcacgtcc
agacctccccatgtggtcctgtcaccggagatagtgcacgctgtagagggacagacggtc
accatgcagtgctttgacgacgcatatcctgtttccaagacagtatggaagagacgggtg
aggaaagaagacattgacgagctccccctgccgcggaatgcggtactgcagagtcacgac
cacctgttagtgctcccagacgtcaggcgggaatcagccgggtactacttctgcgaagtg
gaaaacgaactgggcagaagtaacatattagccaggctatctgttaatgttcctgcgaag
gtcacatcgcttggtaaggacatacctctgcgtttgggaaatgacgtcaccttggaggcc
acgttcgaggggacatcccccgtgactgtcacgtggtacagaaatgcaaatgaggtagtg
acgaacagcaaatacgtcatcaagggtgacgcactgacgatcactgacctgaggttcacg
gacagaggaagataccaatgcatggtacagaacgagtacggagcagaccaagtgttcttc
aatcttgttgccgtcgagccaacaatagtgaaaccaatgaaggacgcacagacagccata
ctgggtgagaccgccacagtggtagtgagatgggaagcctcgccgcctttcatgatcaac
tggagacagagagacaccactgtagtcaccatgaacatggacgacaaacgggcagtacta
gtcacaatcattaaccacagaatgaatgttaccaaagaaggctatttatctatcaatgac
gtcaccgcggctgatgagggaaattacacattctctgtctccaaccagtttgggcacact
gaggcgtccaatcagctgcttgtcatcgcaccaccgacagcacaatcagcctccaatatt
cccctactagcagtaggagctattcttgccttgctcatcattgtcggcgccgcagttgtt
gtatgggtggtcatgaaaagacggagggacagagtgagttcaccgatccgcccagacgcg
gccatcgtccgtccgaacgcagacgaggctttccgtgttcgtctgtatatcgacgataac
gttgcagtcaatgaggacttcggtacagacgatacacgagcattgacagaagatctatag
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