Branchiostoma floridae (Florida lancelet): 118423510
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Entry
118423510 CDS
T01074
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118423510
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118423510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
zf-C2HE
STL11_N
B129_C2H2-zf
zf-BED
Motif
Other DBs
NCBI-GeneID:
118423510
NCBI-ProteinID:
XP_035687573
UniProt:
A0A9J7LS00
LinkDB
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Position
9:complement(18950962..18979124)
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AA seq
749 aa
AA seq
DB search
MSGKVLQVIVNTGVGDNSLRRDKAMRGTTMTEDVLRWNEEDFVKNSTYLVVDQEWEEEGS
QQPRAEGTLPRNLYLKYNDQNEVLGVCSKEYIPQGTRFGPLVGQVYCRDEVPKGANRKYF
WRVYDGEEFQFYVDGYDITKSNWMRYVNPAHSGEEQNLVACQHDMKIYFFTIKPVLPDTE
LLVWYCREFAERLNYPPSGELMMQRIKQALLKEPSLPHANPSDQTANNNNDNIPIDFSKG
RSTNPSPVSPTNGHAASPQSQVQVPVPNAASISLPITSERQDHKERNGLANGHPDETRYS
LKPLPSSFFLPGAVANGTPSTTVVSPTEATKAHIFPSLPGLPKPPALLPNLPYLNGYTPP
FPFVYHDAHARFGLLRPPFDNALLRNSHRLPPSDLRMLGTGPVLTPPMGRIGDMPHSMIK
VKTEPSDISNNNRERQELSVAQSHYMGSPAGNGRSDANSPSKPRRQIQGYKSLPYPLIKK
NGKISYECNVCHKVFGQLSNLKVHLRVHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEK
PHECQICHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQYVHLKLHKRLHGRDRPYQC
QHCHHAYVYRCQLMLHQTKPCTPDDDGNSPAFPPEECDDHCGGCSGECDDDDQRSDVSDG
ERSVEKHDVGETTDQGYTLLEAAKKHPSMDTSDEGENYRSKGSPSNASDGSGSEESGFGT
SNSVLSEGHEEEVPTKENFSKQDVDMPAV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaaagtgttacaggtaattgtgaacacaggtgtgggagacaacagcctaaga
agagacaaagcaatgcgtgggacaacgatgacagaagatgtgctgcggtggaacgaggaa
gactttgtgaagaattcgacctacctcgtcgtggaccaggaatgggaggaagaaggatcg
cagcagccccgagcggagggaaccctccccagaaatctctacctcaagtataacgaccaa
aatgaagtgttgggcgtgtgcagcaaagaatacattccacaaggcacgaggttcggtccg
ctagtgggacaagtgtactgcagggacgaagtgccaaagggagccaaccggaaatatttc
tggagggtgtacgacggagaggaattccagttctacgtggacggctatgacatcacgaaa
agcaactggatgcgttacgtcaacccggcgcacagcggagaagagcagaacctggtggcc
tgccaacatgacatgaagatctacttcttcactatcaagcctgttctccctgatacggag
ctgctggtctggtactgtcgggagttcgcagaacggctcaactaccctccaagtggggaa
ctgatgatgcagagaataaagcaagctctcctgaaggaacccagtctacctcatgccaac
ccatcggaccagacagcaaacaataacaatgacaatatccccatagacttcagcaaaggc
agatccaccaatccctcgcctgtcagcccgacaaacgggcacgctgcgtcgccccaaagc
caagtacaagttcccgtgccaaatgctgctagcatctctctaccaatcactagcgagagg
caagaccataaggagagaaacggactagccaatgggcatccagacgaaacgcgctatagc
ctcaaaccactgccaagttcgttctttctaccgggcgcagtggcaaacgggactccaagc
accaccgttgtgagccccacagaggcgacgaaagcccacatattcccgagcctaccgggt
cttccgaaacctccagccttgcttcccaacctgccctacctcaatggttacactccacca
tttccatttgtctaccacgatgctcacgccagattcggtttacttcgcccgccgttcgac
aacgccctgctgagaaacagccacaggttgccaccctccgatctcaggatgctgggaacg
gggcccgtgttgacgccgcctatgggtaggatcggcgacatgcctcacagtatgatcaag
gtgaagacggagccctccgatatcagcaacaacaacagggagagacaggaactgtccgtg
gcacagtcgcactacatgggttcgccggccgggaacggtaggagtgacgccaatagcccg
agcaagcctcggaggcagatccaggggtacaagtcgctcccgtacccgctcatcaagaag
aacgggaagatcagctacgagtgcaacgtgtgccacaaggtgttcgggcagctgtccaac
ctgaaggtgcacctgagggtgcacagcggcgagcgccccttcaagtgtcagacctgcggg
aagggcttcacccagctggctcacctgcagaagcatcacctggtgcacacaggtgagaag
cctcacgagtgccagatctgtcacaaacggttcagcagcaccagtaacctgaagactcac
ctgcggctgcacagcggggagaagccttatcagtgcaagctgtgcccggccaagttcaca
cagtacgttcacctgaagctacacaagcgcctccacgggcgcgaccgcccgtaccagtgc
cagcactgccaccacgcgtacgtctacaggtgccagctcatgcttcaccagaccaagccc
tgtactccagacgacgacggcaactctcccgccttccctccggaagagtgcgacgatcac
tgcggcggatgttcgggcgaatgcgacgatgacgaccaaaggagcgatgtttctgacggc
gagcgtagcgtggagaaacacgacgtcggcgaaaccacagaccaagggtacaccttgtta
gaggcagcgaaaaagcacccgtcgatggatacgtcagatgaaggcgagaactacagaagc
aaaggtagcccgagtaacgccagcgatggcagcgggagtgaggaaagcgggtttggcacc
agcaatagcgtactgtcagagggccacgaagaggaagtgcccacgaaagagaacttctcg
aaacaggacgttgacatgcccgctgtttag
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