Branchiostoma floridae (Florida lancelet): 118423511
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Entry
118423511 CDS
T01074
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118423511
Enzymes [BR:
bfo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
118423511
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Other ribosome biogenesis factors
118423511
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
Methyltr_RsmB-F
NSUN5_fdxn-like
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
HRI2_3H
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
118423511
NCBI-ProteinID:
XP_035687582
UniProt:
A0A9J7LR61
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Position
9:complement(18990555..19007794)
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AA seq
528 aa
AA seq
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MLYTEVAAILLKLDNKEGTVKSLVYNSRHKNKRQLYALLCETLKYGSIIDDIITSTQLLK
REKFLKKHMAQVLVYEQLFGKGLQIGGKYREAMNRNKTALHSALVRLKVRSKVSRNEDLL
PDTVKSQVSLPRYVRVNTLKISVEEAIEKLKKAGFSLADKPSVENFGNTIRDLETGQFVQ
DPHIPALLVFPPETGFHDNQLYKSGEIILQDKASCIPAQVLAPPPGACVIDACAAPGNKT
SHMASLMQNNGKIFAFDIDAKRLATMRSLTQRAGVSCAQLVHGSFLECDPGDPRYSGVEY
ILLDPSCSGSGIANRLDHLTDEEGSISTERLESLAQFQLSALRHALSFPAARRVAYSTCS
VHRQENEDVVQAALQEYEGKYHLQHILPTWRHRGTDTFPQAHRCIRASPEQDRTNGFFVA
LFEKNSERVDVKVEQTTSQNTEHGENAFVKKKRRRKRKKNVSVEKRTEQSKTTKTPETNG
KEELEGKELVGKQLVGKQLVGKECVSQKVQTENTSRPKKRRKKMKQET
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatacagaggtggccgccattctccttaaactggacaacaaggaaggaacggtc
aagtctctggtctacaacagccgccacaagaacaagagacagctctatgcacttctgtgt
gagaccctgaagtatggctccatcatcgatgacatcatcacttcaacacaattgctcaag
agagaaaagtttctcaagaagcacatggcacaggttcttgtatacgaacaacttttcggg
aaaggacttcagatcggagggaagtaccgggaggccatgaataggaacaagactgccctg
cattctgccctggtcaggttaaaggtcaggtcaaaggtcagcaggaatgaagacctccta
cctgatacagtcaaatctcaagtttccctgccacgttatgttcgagtcaacacactgaag
atttctgtggaagaggctattgagaagttgaagaaagctggcttctcactggcagacaaa
ccaagtgtggagaattttggcaacacaataagggacctggagacaggacagtttgtacag
gacccccacatcccagccctgctagtgttccccccggagactggtttccatgacaaccaa
ctgtacaagtcaggagagatcatccttcaagacaaggccagctgtatccctgcccaggtg
ctggccccaccccctggagcatgtgtgattgacgcctgtgctgcccccggcaacaagaca
agtcacatggccagcctcatgcaaaataacgggaagatatttgcctttgacattgatgcc
aagaggctggcgaccatgaggtcgttgacccagcgtgcgggcgtgtcctgcgcccagctg
gtgcacgggagtttcctggagtgtgatccgggtgatcccaggtactccggagtggagtac
atcctgctggatccctcctgcagcggatctgggatcgcaaacaggctggatcacctgacc
gacgaggaagggtccatttctacggagagactggagtccctggcacagttccagctgtct
gccctgagacacgcgctgtcgttccccgcggcgaggagggtggcgtactccacgtgttcc
gtacaccgccaggagaacgaggatgtggtacaggcggcgctacaggaatatgagggaaag
taccatcttcagcacatcttaccaacatggagacatcgagggacggacaccttccctcag
gcccacaggtgtatcagggcctcacctgagcaggacaggactaacggcttctttgtcgcc
ttgtttgaaaagaacagcgaaagggtcgacgtaaaagtagaacagaccacgtcacaaaac
acagaacatggagaaaatgcttttgttaaaaagaagaggaggagaaagagaaagaaaaat
gtttcagttgagaaaaggacggaacaaagcaaaacaacgaagactcctgaaactaatggc
aaagaggaacttgaaggcaaggaactcgtaggcaagcaactcgtaggcaagcaactcgta
ggcaaggaatgtgtgtcgcagaaagttcagacagaaaatacatcaaggccaaaaaagaga
agaaaaaagatgaagcaagagacataa
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