Branchiostoma floridae (Florida lancelet): 118423850
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Entry
118423850 CDS
T01074
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
bfo03015
mRNA surveillance pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118423850
09122 Translation
03013 Nucleocytoplasmic transport
118423850
03015 mRNA surveillance pathway
118423850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118423850
03041 Spliceosome [BR:
bfo03041
]
118423850
03009 Ribosome biogenesis [BR:
bfo03009
]
118423850
03012 Translation factors [BR:
bfo03012
]
118423850
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118423850
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118423850
mRNA cycle factors
Stress granule specific factors
118423850
Spliceosome [BR:
bfo03041
]
Complex C
Other components
EJC/TREX
118423850
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
Helicases
118423850
Translation factors [BR:
bfo03012
]
Eukaryotic type
Initiation factors
eIF-4
118423850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
CbiA
Motif
Other DBs
NCBI-GeneID:
118423850
NCBI-ProteinID:
XP_035688034
UniProt:
C3ZMT4
LinkDB
All DBs
Position
1:complement(9213344..9218423)
Genome browser
AA seq
403 aa
AA seq
DB search
MAGRRRTVVTEGVDTSTIEFETSEDVEVTPTFDSMGLREDLLRGIYAYGFEKPSAIQQRA
IKPIVKGRDVIAQAQSGVGKTATFSISILQCLDIQMREVQALVLSPTRELATQIQKVILA
LGDYMSVQCHSCIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTTKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH
GDMPQKERDAIMKEFRSGASRVLITTDVWARGIDVPQVSLIINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgacgacgcactgtggtgactgagggagtggataccagcactatcgagttc
gaaacaagcgaagatgtcgaagttacaccaaccttcgactctatgggccttagggaagat
ctcctgcgtggcatttacgcctacggctttgagaaaccgtcagcaatccagcagagagcg
atcaagcctatcgtgaagggaagagatgtcattgcacaggcccagtctggtgtggggaaa
acagccacattctccatttccatcctccagtgtctagatattcagatgcgagaagtccag
gccttggtcctgtccccgaccagagagctggcaacacagattcaaaaggtgattttagct
ctgggtgactacatgagtgtccagtgccattcctgtattggtggcaccaatgttggagaa
gacatccggaagctggactatgggcagcatgttgtgtctgggacaccaggcagagtattt
gacatgatccgaagacggaacctgcgtactcgctccatcaagatgctggtgcttgatgag
gcagatgagatgctaaacaaaggtttcaaggagcagatctacgacgtgtaccgttacctg
cctccagccacccaggtggtcctgctgagtgccaccctgcctcatgagatcctggagatg
acaacaaagttcatgacagaccccatccgcattctggtcaagcgtgatgagttgacgctg
gagggcattaagcagttctttgttgctgttgagcgagaagagtggaagttcgacaccctg
tgtgacctgtacgacactctaaccatcacacaggcagtcatcttctgcaacaccaaacgc
aaggttgactggttgacagagaagatgcgtgaggctaacttcactgtgtcttctatgcac
ggagacatgccgcagaaggagagagatgccatcatgaaggagttcagatctggtgccagc
cgtgtgctgatcacaactgacgtgtgggcccgcggtattgatgtgccgcaggtgtccctg
atcatcaactacgacctgcccaacaaccgtgagttgtacatccacagaattggccgttca
ggtcgctttggccgtaagggtgtggctatcaactttgtgaagagtgacgacatcaggatc
ctgagagatattgagcagtactacagcacacagattgatgagatgccaatgaatgtcgct
gatcttatctag
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