Branchiostoma floridae (Florida lancelet): 118423854
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Entry
118423854 CDS
T01074
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118423854
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118423854
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118423854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
118423854
NCBI-ProteinID:
XP_035688035
UniProt:
A0A9J7LTK6
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All DBs
Position
10:7242383..7248927
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AA seq
443 aa
AA seq
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MEKSRYGGGGSGYGGRGGDRGGRGGYGSGGGGGFGGSRNGWKDSQPGERLRKPKWDLSKL
VPFERNFYQEHPNITNSPMAQVEQYRAEREVTVQGRNVPKPVIEFHYASFPDYVMEEIRN
AQFEKPTPIQAQGWPVALQGRDIVGIAQTGSGKTLAYMLPAIVHINHQPYLERGDGPICL
VLTPTRELAQQVQQEASKFGRSSRIKNTCVFGGSPKGPQIRDLERGVEVCIATPGRLIDF
LEAGKTNMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMYSATWPKEVRQLAE
EFLKEYTQINIGALQLSANHNILQIVDVVQEHEKDHKLSRLLEEIMGEKENKTIIFVETK
RRVDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNQFRSGKAPILVATDVASRGLDGGRND
RHDYILVTERRGVSRLRGLQCAM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatccagatatggaggtggtggtagtggttacggtggacgcgggggtgaccgt
ggtggccgcgggggttacggatccggcggtggcggcggatttgggggttccagaaatgga
tggaaggactcccagccaggagagaggctccgcaaacccaagtgggacctttccaaactg
gtgcccttcgagaggaacttctaccaggaacatcccaacattaccaacagtcccatggca
caagttgagcagtaccgcgctgaaagagaggtcacagtccaaggtcgcaacgtccccaaa
cctgtcattgagttccactatgcctcctttccagactatgtgatggaggagatcaggaat
gctcagtttgagaagccgacgcccatccaggcccaaggatggccagtcgctctgcagggt
cgcgatatcgtgggcatcgcacagacaggctcagggaaaactctcgcttatatgttgcca
gccattgttcacatcaaccaccaaccctacctggaacgtggggatgggccaatctgcttg
gttctaacgccgacccgggaattagcgcaacaagttcaacaggaggcctctaagtttggc
agaagttcccggataaaaaacacttgtgtgttcggtggttctcctaaaggaccacagatt
cgagatcttgagaggggtgtagaagtctgcatcgcaactcctggccgcctgatcgacttc
ttggaagcggggaagacgaacatgcgccgctgcacgtacctggttctggacgaggctgac
cgcatgctggacatgggcttcgaaccccagatcaggaagatcatcgaacagatcaggcct
gaccgtcagaccctgatgtacagtgccacctggcctaaggaggtccgacagcttgccgag
gagttcctgaaggaatacacacagatcaacatcggcgctctccagctctccgccaaccac
aacatcctgcagatcgtggatgttgttcaggaacacgagaaggatcacaagttgagtcgt
ctgctagaggaaatcatgggtgagaaagagaacaagaccatcatcttcgtagagaccaaa
cgcagagtggacgacttgacacgccgcatgcgcagagatggctggcctgcaatgtgtata
cacggagacaagtctcagcctgagagagattgggtgctgaaccaattccggtccggaaag
gcccctatccttgtagccaccgacgttgcttcccgtggtctagatggcgggaggaatgac
cggcatgactacatcttggttaccgagaggaggggcgtgagccgtttacgtggactccaa
tgtgcaatgtag
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