Branchiostoma floridae (Florida lancelet): 118423986
Help
Entry
118423986 CDS
T01074
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04145
Phagosome
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
bfo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
118423986
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118423986
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118423986
09142 Cell motility
04820 Cytoskeleton in muscle cells
118423986
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118423986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118423986
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118423986
04515 Cell adhesion molecules [BR:
bfo04515
]
118423986
04090 CD molecules [BR:
bfo04090
]
118423986
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118423986
Exosome [BR:
bfo04147
]
Exosomal proteins
Proteins found in most exosomes
118423986
Cell adhesion molecules [BR:
bfo04515
]
Integrins
Integrin beta subunits
118423986
CD molecules [BR:
bfo04090
]
Proteins
118423986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
PSI_integrin
I-EGF_1
vWA_SIBA-E
EGF_2
DUF4064
Motif
Other DBs
NCBI-GeneID:
118423986
NCBI-ProteinID:
XP_035688245
UniProt:
A0A9J7LTZ5
LinkDB
All DBs
Position
10:15668699..15691567
Genome browser
AA seq
769 aa
AA seq
DB search
MGCLYLLLVLGVVAAATAQDVNRCIAKKPRNCGECIIIGPECGWCKQESYDNTRRCDQYQ
SLLDGGCPRDMIVYPRSKLTIIKDEFLSTAYQLKPQEVTIKIRAGEPYTFRAAFRQAEDY
PVDLYYLMDMSKSMEDDLQSLRALGDTLAEEMQMITKNFRIGFGSFVDKTVMPYVSTVPK
KLLEPCSGCAAPFGYKNVLPLTTRTNMFTQELNLQEISGNLDAPEGGFDAMMQAAVCTGE
IGWRNGSTHLLVFSTDSSFHYAGDGKLGGIVTPNDGRCHLDDDMMYTFSNYLDYPSVGHL
QRKLKEHRIRPIFAVTADQASVYGNLSDLIEGSVVGTLAGDSSNVVDLIKSAYEELRSTV
ELKTEDVPNNVTLKFRSVCLNNETFDGAKCSNLQVGDTVYFDITVVTEGCPSRRPKTFTV
YPVGFQEELLVKLDFICDCGCQADGIVASPLCSDGNGIFECGACNCNAGRYGPQCECTID
DNEASDFDATCRQANSSVICSGRGECICGECVCFPRDNPREKVYGPFCECDNFSCDRYEG
LICGGAGRGVCNCGVCECTAEWEGSACQCPAGNSTCVATNGLLCNDQGLCECGICNCFAS
SLYRGPTCEECPTCPGQCELLRPCVQCEAFGTGELDEDECKLCDPKAIIVDELKQGDEVT
RCVFKDEDDCSFIFTYGNGLDGNMEIEVQRTKVCPEEVNILAIILGVIGGILGIGLALLL
IWKLLMTIHDRREFAKFEKERMNAKWDTGENPIYKQATSTFKNPTYGGK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtttatatctactactggtgctgggggtggtggcagcagcaactgctcaggat
gtgaaccgctgtatagccaagaagccacggaactgcggggagtgtatcattattggaccg
gagtgtggctggtgtaaacaagagtcttacgacaacacccgtcggtgtgaccagtaccag
agcctgctggatggaggatgtcccagggacatgatcgtgtacccacgcagcaaactcacc
atcatcaaggatgagtttctcagcacagcctaccagctgaaaccacaggaggtcaccatc
aagatcagagcaggtgaaccctacacattccgcgctgcgttccggcaggcggaggactat
cccgtggacctgtactacctcatggacatgtccaagtccatggaggatgatctgcagagt
ctacgggcactcggagatacgctagctgaagagatgcagatgatcaccaagaacttccgg
atcggttttgggtcgtttgtggacaaaactgtcatgccttacgtcagcactgtgccaaag
aaactgctggagccgtgcagcggttgcgccgcgccgttcggctacaagaacgtgttgccg
ctgacgacgaggaccaacatgttcacccaggagctcaacctgcaggagatctccggcaac
ctggatgctccggaggggggcttcgacgccatgatgcaggcagctgtctgtacgggggag
atcggctggaggaacggctccacgcatcttcttgtgttttccaccgactcatctttccac
tacgccggcgacgggaagctgggcgggatcgtcacgcctaacgacgggaggtgtcacctt
gatgacgacatgatgtacacattcagcaactacctggactatccttcagttggccaccta
cagaggaaactgaaggaacacaggattcggcccatctttgctgtcactgctgaccaggcc
tctgtctatgggaacctgagtgatctgattgaggggtccgtagtgggaacactggctggt
gactcctccaatgtggtggatctgatcaagagtgcttatgaggagcttaggtccactgtg
gagctgaagacagaagacgtgcccaataatgtgaccctgaagttcaggtccgtctgtctg
aacaacgagacgtttgatggggcaaagtgcagcaacctgcaagtgggagacacggtttat
tttgacatcacagttgtgacagaaggatgtccctccagaaggccaaagacgttcacagtg
taccctgtaggcttccaggaggagctactggtcaagctggacttcatctgcgactgtggc
tgccaggctgacggaattgttgccagcccattgtgctcggacggaaatggaatatttgaa
tgtggagcttgcaactgtaatgctggcaggtacggccctcagtgtgaatgcacgatagac
gataacgaggcctcagacttcgacgcgacctgccgccaggcgaactcttcggtgatctgc
tcggggcgtggggaatgcatctgcggggagtgcgtgtgcttccctagggacaacccccgg
gagaaggtgtatgggccgttctgcgagtgcgacaacttctcctgtgacagatacgaggga
ctcatctgtggaggcgctggccgtggtgtgtgtaactgcggagtatgtgagtgtactgca
gaatgggagggcagtgcctgtcagtgtccagcagggaacagcacctgtgtcgccaccaat
ggcctcctgtgtaacgaccagggcttatgtgagtgtggcatctgtaactgctttgcttcc
agcctctatagaggacccacctgtgaagaatgcccgacgtgtcccggccagtgtgagctg
ctgaggccgtgtgtccagtgtgaggccttcgggacaggagagctggacgaagacgagtgt
aagctgtgtgatcctaaggccatcattgtggacgaactcaaacaaggagacgaagtaacc
cgctgtgtctttaaggatgaggacgactgttccttcatcttcacctacggcaacgggctg
gacgggaacatggagatagaggtgcagaggactaaggtgtgtcctgaggaagtgaacatc
ctggccattatcctgggagtgatcggaggtatcctgggtatcggtctggcgctgctgctc
atctggaaactcctcatgaccatccacgatcgccgagagttcgccaagttcgagaaggag
aggatgaacgccaagtgggacacgggagagaaccctatctacaaacaggcaacatcaaca
ttcaagaacccaacatacggaggaaagtaa
DBGET
integrated database retrieval system
