Branchiostoma floridae (Florida lancelet): 118424061
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Entry
118424061 CDS
T01074
Name
(RefSeq) transformer-2 protein homolog beta-like isoform X1
KO
K12897
transformer-2 protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118424061
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118424061
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118424061
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118424061
Spliceosome [BR:
bfo03041
]
Common components
Common spliceosomal components
SR proteins
118424061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Collagen
Motif
Other DBs
NCBI-GeneID:
118424061
NCBI-ProteinID:
XP_035688417
UniProt:
A0A9J7LSE9
LinkDB
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Position
10:complement(9796839..9809267)
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AA seq
340 aa
AA seq
DB search
MSDTNGEYEERRESTGRRSKGSAPRSASRSASRSRSPSGSNRSYSRSPSARAASRSPSRS
RSRSASRSPSPRKHSRASRSRSRSRSYDRRRRYSRSRSRSRSRRRYRSRSRSPRRSSYYG
SSYGGSRYRRSHSRSPMSNRRRHVGSRENPTTGACLGVFGLSLYTSERDLREVFSRYGPL
QEVQVVYDQKTGRSRGFAFVYFQTTEDAVEAKDRTNGMEVDGRRIRVDYSITERAHTPTP
GIYMGRPTTGGDRGDRGDRGDRGDRGDRGDRGDRGDRGDRYDRGDRYDRGGGGGGGGGYR
DRDRDRDYYRRSPSPYSYRGSRRYYSRSRSRSYSRSPRRY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacactaacggcgaatacgaagagcggagggagagcactgggagacgatctaag
ggatctgcaccaagatctgcatcccggtcggcctcgcgatctcggtcgcccagcggatcc
aaccgctcgtactcccgctctccttcagcccgcgctgcctcacgatctccttccaggtcc
cggtccaggtcagcctccaggtctcccagcccacgcaagcattccagggcctcgcgatcc
cgctctcgctcacgctcgtacgaccgccggcggcgctacagtcgttctcgctccaggtca
aggtcgcgtaggagatataggtctcgcagcagaagcccccgacgcagcagctactacgga
agcagctatggaggcagccgttaccggcgcagccacagccgatcccccatgtccaaccgc
cgcagacatgtcggcagcagggaaaacccgaccaccggcgcctgcctgggtgtgtttggg
ctaagcctgtacacctcagagcgggatcttcgggaggtgttctcccgctatggtccactg
caagaagtacaagttgtctacgaccaaaagaccggccggtctcgaggatttgcctttgtg
tacttccaaactactgaggatgcagtcgaggccaaggaccgtaccaatggaatggaggtg
gatggacgccgcatccgtgtggactattccatcacagagagggctcacacccctactcca
ggcatctacatgggacgacccaccacggggggagatcgcggagaccgtggggatcgcgga
gaccgtggggatcggggtgaccgcggggatcgaggtgaccgtggggatcgaggggatcgg
tacgaccgcggggatcgttacgaccgtggcggtggtggcggcgggggcggtggctacaga
gaccgtgatcgtgaccgggactactaccggaggtcaccgtcgccatattcctaccgtggc
tccaggcgctactattctcgctcacgatcccgctcatactcgcgctcaccacgtcgctac
taa
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