Branchiostoma floridae (Florida lancelet): 118424082
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Entry
118424082 CDS
T01074
Name
(RefSeq) partner of Y14 and mago-like isoform X1
KO
K14294
partner of Y14 and mago
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118424082
03015 mRNA surveillance pathway
118424082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118424082
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118424082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
MTR4_beta-barrel
CDGP
Motif
Other DBs
NCBI-GeneID:
118424082
NCBI-ProteinID:
XP_035688462
UniProt:
A0A9J7LSH9
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All DBs
Position
10:10477669..10480588
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AA seq
199 aa
AA seq
DB search
MLQKNMAEAVTDDVTGEKFIPASQRPDGTWRKARRVKQGYVPQEEVPVYESKGTQWMKSK
PTLPPGFYPDPEEQVKQMSEEDKYAGMSKAAKKNAKRKEKKKQQQGDGGAGPITQGLEQV
NISNQSQEAKINNGQSQDSTSEPAKKLKGLKKKLRQIEDLEAKIESGELAKPDKTQLDKI
KRKTEILKEIRELEKQVGS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagaaaaacatggcggaggcagtcacggatgatgtaacaggtgagaagtttatc
cctgccagccagcgccctgatggcacctggaggaaggcacggagagttaagcagggttac
gtgccacaggaggaagtgccagtttatgagagtaagggaactcagtggatgaagagcaag
ccaacacttccaccaggcttttacccagaccctgaagaacaagtcaagcagatgtctgag
gaagacaaatatgccggcatgtcaaaagctgcaaagaaaaacgccaaaagaaaagagaag
aaaaaacaacagcagggagacggaggggctggtccaatcacccagggattagaacaggtc
aatatatccaaccaatcacaggaagccaagataaacaatggccaatcacaagacagcaca
tcagagccagccaagaagttgaaaggcttgaaaaagaagttacgacagattgaagatcta
gaggcaaagatagaatcaggagaattagctaagccagacaaaacacagctagataagata
aagagaaaaacagaaattctgaaggagatacgagaactagaaaaacaagtaggctcataa
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