Branchiostoma floridae (Florida lancelet): 118424189
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Entry
118424189 CDS
T01074
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04145
Phagosome
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118424189
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118424189
09142 Cell motility
04820 Cytoskeleton in muscle cells
118424189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118424189
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118424189
00536 Glycosaminoglycan binding proteins [BR:
bfo00536
]
118424189
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Phagocytosis
Opsonins
118424189
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118424189
Exosomal proteins of colorectal cancer cells
118424189
Exosomal proteins of bladder cancer cells
118424189
Glycosaminoglycan binding proteins [BR:
bfo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118424189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
Ephrin_rec_like
NCD3G
Motif
Other DBs
NCBI-GeneID:
118424189
NCBI-ProteinID:
XP_035688619
UniProt:
A0A9J7LUX3
LinkDB
All DBs
Position
10:complement(370947..380115)
Genome browser
AA seq
746 aa
AA seq
DB search
MQSDYVAMVCAAGRYRPGRPHMVGDVHYFSGTDCSSSINEIISNFQQLFSQMDSSQPGGT
ITIELQNVEVVCGATSRQATSIRGRNVISKSERSANGFTVKFMVVAISSLAPADVSQTVQ
ANLVYALDDIYFDIEDKVASQQFNLHINGQQATVDTFDIGFAEFDLNCTQGQLSFQDSFE
AYCLDCPPGTFHDLTTDTCEYCPVGEYQNQPVQTTCKPCPVNTWSVFPGAKEEAQCMSVC
LGKDDLCSGCVHAKGQLTCKCEVGWAGSQDGLTCGLDSDQDGYPDAPLPCNGTWCKKDNC
PGIPNSGQEDTDGDGMGDTCDDDMDNDGFLNVEDNCPLTMNVNQTDSDGDGVGDVCDNCP
ADFNTDQRDADRDGVGDVCDSDVDSDGLIDDKDNCPSMDNVQQEDLDGDGIGDVCDNCPT
IANVDQMDMDQNSFGDACSDNVDSDSDGVPNSLDNCPDIPSSQQLDTDKDGAGDHCDNDD
DNDTVLDDVDNCRLVHNPDNADFDGDGVGDACTDDYDMDGVPDADDVCPQNKVIARTDFR
NYQTMNLAGSTSNPPVWEIFNEGAEIVQKVNSDPGFVLGPDYFGNLDYSGTFFVNTQTDD
DFVGFVFSYQSNSRFYLVSWKQAGDSQGGQAGVQLKLVESTTGPSQNLSIALWKGLETPG
QTKLLWEDPNKVGWSYNTAYRWELKHWVDIGLIRFRLYEGSRLVVDSGDVQDASLRGGRL
GVYCYSQENVIWSHLVTKCDGNLPSA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgattatgttgcaatggtatgtgcggcaggaaggtatcgtccgggacgccct
catatggtaggagatgtccactacttctccggtacggactgttccagcagtataaacgag
atcatctccaactttcaacagctgttcagccagatggactcctctcaacccggtggtact
ataacaatcgagttacaaaacgttgaagtggtgtgtggagccacatccagacaagccact
tcaataagagggcgcaacgtcatctcaaaatctgagagatccgcaaatggcttcacagta
aagtttatggtagttgccatcagctcgctggcaccagcggatgtctctcagactgtgcaa
gctaacctcgtttatgctctagacgatatttattttgatatcgaagacaaggttgcaagt
caacaattcaacttacacatcaacggacagcaagccacagtcgacacatttgacataggg
tttgcggagttcgacctcaattgtacccagggacaactgagttttcaagacagcttcgag
gcatactgccttgactgtccgcctggcacgttccatgacctgactacggacacgtgtgag
tactgccctgttggtgagtaccagaaccagccggtacagactacctgcaaaccctgtcct
gtcaacacctggtcagtgtttcctggagcaaaggaggaggcacaatgcatgtcagtctgc
ctgggcaaagacgatctgtgctccggttgtgtacacgcaaaagggcaattgacctgcaag
tgtgaagttgggtgggcggggtcccaggacggactgacctgtggacttgacagtgaccaa
gacggctatccagatgcgcccctgccctgtaacggcacatggtgtaagaaggacaactgt
ccaggtatccctaacagtggtcaagaagacacagacggggatgggatgggagacacttgc
gatgatgacatggacaacgatggattcctcaatgtcgaggacaactgcccgctgacaatg
aatgtgaaccagacggacagtgacggagatggagtaggtgacgtgtgtgacaactgtcca
gcggacttcaacactgaccaacgggacgctgatagggacggcgtgggcgatgtgtgcgac
agtgatgttgatagtgatgggcttatagacgacaaagacaactgcccatccatggacaat
gtccagcaggaagatttggacggagacgggatcggagatgtttgtgacaactgtccaact
attgcaaacgtagatcagatggacatggaccaaaactcctttggcgatgcttgctcagac
aatgttgacagcgattcagacggggtccctaactcgttagacaattgtcctgacatccca
agcagtcaacagttggataccgacaaggatggagcaggagaccattgtgacaatgatgac
gacaatgatacagtattagatgacgtcgacaactgtcgcctcgttcacaatccggacaat
gcagactttgacggagatggagtaggtgatgcctgtaccgatgactatgacatggacgga
gtccctgacgctgatgacgtatgtcctcagaataaggtcatcgcccgcacggacttcagg
aactaccaaaccatgaacctggccggaagcaccagcaaccctccggtgtgggagatcttc
aatgagggagcagagatagttcagaaagtgaacagtgacccaggttttgtgctcggtcca
gactacttcggcaacttggactacagtggaactttcttcgtcaacacccagactgatgac
gactttgtggggttcgtcttcagctatcagagcaactctcgcttctacctggtgtcctgg
aaacaggcaggggacagccagggaggacaggcaggggtgcagctgaagttggtggagtca
acgaccggacccagtcaaaacctatcgattgctctatggaagggcctggagacccctgga
cagactaagctgctgtgggaggatcctaacaaagtggggtggagctacaacaccgcctac
cgctgggagctgaaacactgggtggacatcggactcatcaggttccgtctgtacgaaggt
agccgcctcgtggtggactcaggtgacgttcaggacgcctctctccgcggaggccgcctc
ggggtatactgttactcacaggagaacgtcatctggtctcatcttgtcaccaagtgcgat
ggcaacctcccatctgcttaa
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