Branchiostoma floridae (Florida lancelet): 118424195
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Entry
118424195 CDS
T01074
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K04659
thrombospondin 2/3/4/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04145
Phagosome
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118424195
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118424195
09142 Cell motility
04820 Cytoskeleton in muscle cells
118424195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118424195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118424195
00536 Glycosaminoglycan binding proteins [BR:
bfo00536
]
118424195
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Phagocytosis
Opsonins
118424195
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118424195
Exosomal proteins of colorectal cancer cells
118424195
Exosomal proteins of bladder cancer cells
118424195
Glycosaminoglycan binding proteins [BR:
bfo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118424195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
FXa_inhibition
cEGF
EGF
hEGF
EGF_3
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118424195
NCBI-ProteinID:
XP_035688625
UniProt:
A0A9J7N3D6
LinkDB
All DBs
Position
10:613989..634529
Genome browser
AA seq
1229 aa
AA seq
DB search
MSRSLQVEGRWRWLDGSSLSYQNWAPGQPSNYNGADCGILWGSYHYDKWDDSVCSYRFYS
ICQKEINECSSNNGGCEHSCENTVGSYRCTCRTGYQLYGSRYCRDVNECSSNNGGCDHNC
ENTDGSYDCTCRDGYQESGSRCYDINECSSNNGGCDHNCVNTGGSYDCTCRAGYQLSGSK
DCINIDECVSSPCQNGGTCHDLINEYRCDCQPGWSGGNCQEDADECLTNGGRGPCDQICT
NEYGSYRCSCQAGYQLYSDSVSCVDVNECDEAQHDCEQTCLNIVGSFTCGCEDGFLLSAD
GKTCSDIDECSSSPCQNGGTCHNLINEYRCDCQPGWSGGNCQEDVNECDINLHDCQQVCL
NTFDGFSCGCDDGFSLNTDGKSCSKTDNCVPGACESGGTCIDGNSTFSCVCLPGFLGERC
QTAPCSEDYPPPVNGGKACSVTDDTTVAMYYTVYCRDNKEFAIEPAQAYTCRADGSWFAG
SNLVVGQSSPWPDCSGRYRPGRPHMAAEVHYFSGTDCSSSINEIISNFQQLFSQMDSSQP
GGNMTIELQNVDVECGAASRQVTSTRGRNFISKSERSANEFTVKFMVVAISSLAPADVTE
TVQANLVYALDDIYFDIEDKVASQQFNLNINGQQATVDTFDIGFAEFDLNCTEGQLSFQD
SFEAYCLDCPPGTFHDLTTDTCEYCPVGEYQNQPVQTACKPCPVNTWSVFPGAKEEAQCM
SVCLGKDDLCSSCVHAKGQLTCKCEVGWAGSRDGLTCGLDGDQDGYPDVSLPCNGTRCKK
DNCPGIPNSGQDDTDEDEMGDACDYDMDNDGLPNVLDNCPLTVNVDETDSDGDGVGDVCD
NCPMNINTDQRDADRDGVGDVCDSDADEDGVIDNQDNCPFMANAQQKDSDGDGIGDACDN
CPTVANVDQFDLDQNSIGDACVDNDDRDADGVPNSLDNCPDIPNSQQLDTDKDGAGDVCD
DDDDDDAILDDVDNCRLVPNPDNADFDGDGVGDVCTDDYDMDGVLDADDVCPESEVIART
DFRNHQTVNLAGSTSNLPVWEIFNEGAEIVQTMNSDPGLVLGPNYFGNLDYSGTFFVNTQ
ADDDFVGFVFSYQSNSRFYLVSWKQAGDSEGGQAGVQLKLVDSTTGPGHDMSLALWKGVE
VPGQTKLLWEDPNKVGWSYNTAYRWELKHRADIGLSRFHLYEGSRLVVDSGDVQDASLRG
GRLGVYCYSQENVIWSDLVTKCDGDTSSV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctccttacaggtggagggccgatggcgctggttagacggatcatctctgagc
taccagaactgggctccgggacaaccgagtaactataacggcgctgactgtggcatcctg
tgggggtcctaccactatgataagtgggatgactcggtttgctcgtacagattctactct
atctgtcaaaaagagatcaacgaatgttccagtaacaacggaggctgcgaacatagctgt
gaaaacactgtcgggagctaccgctgtacctgtaggactgggtaccagctgtatggttca
agatactgtagagatgtaaacgagtgctcgagtaacaacggaggatgtgaccacaactgt
gagaacactgacgggagctacgactgtacctgtcgggatgggtaccaggaatctggatca
agatgctacgatataaacgaatgttccagtaataacggaggatgtgaccacaactgtgtg
aacactggtgggagctacgactgtacctgtcgggccggatatcaattgtctggatcaaaa
gattgcattaatatcgacgaatgtgtcagctcgccttgtcaaaatggcggaacctgtcac
gacctcatcaacgagtaccgctgtgactgtcaacctggatggagcggtggcaactgtcag
gaagatgccgatgagtgcttgactaacggaggacgaggaccatgtgaccagatctgtacc
aatgagtatgggagttatcgctgctcgtgccaggcaggatatcagctatattcggacagc
gtctcttgtgttgatgtaaacgagtgtgacgaagcccagcatgactgtgagcagacatgt
ctgaacattgttggcagcttcacttgtggatgtgaggacgggttccttctcagtgcagat
ggaaaaacctgctcagatatcgacgaatgttccagctcgccttgtcaaaatggcggaacg
tgccacaacctcatcaacgagtaccgctgtgactgtcaacctggatggagcggtggcaac
tgtcaggaagatgtgaacgagtgcgacataaatcttcacgactgtcaacaagtatgtctg
aacacctttgacgggttctcgtgtggatgcgatgacgggttctctctaaacactgatggg
aagtcttgttcaaaaacggacaactgcgtcccaggagcctgtgaaagcggcggaacatgt
atcgacggcaatagcaccttctcttgtgtgtgcctacctggatttctgggagagagatgt
cagactgctccatgcagcgaagactacccaccacccgttaacggtggcaaagcctgctca
gtgacggatgacacaacagtggccatgtactatacagtctactgtagggacaacaaggag
ttcgcaatagaacctgcccaggcgtacacctgcagggccgatgggagctggtttgctggc
tctaatctcgtggtgggccagagtagtccttggccagactgttcaggaaggtaccgtccg
ggacgccctcatatggcagcagaagtccactacttctccggcacggactgttcaagcagc
ataaacgagatcatctccaactttcaacagctgttcagccagatggactcctctcaacca
ggtggtaatatgacaatcgagctacaaaacgttgatgtggagtgtggagcagcatccaga
caagtcacttcaacaagagggcgcaacttcatctcaaaatccgagagatccgcaaatgaa
ttcacagtaaagtttatggtagttgccatcagctcgctggcaccagcggatgtcactgag
actgtgcaagctaacctcgtttatgctctagacgatatctattttgatatcgaagacaag
gttgcaagccaacaattcaacttaaacattaacggacaacaagccacagtcgacacattt
gacatagggtttgcggagttcgacctcaactgtaccgagggacagctgagttttcaggac
agctttgaggcgtattgccttgactgtccgcctggcacgttccatgacctgaccacagac
acgtgtgagtactgccctgttggtgagtaccagaaccagccggtacagaccgcctgcaaa
ccctgtcctgtcaacacctggtccgtgtttcctggagcaaaggaggaggcacaatgcatg
tcagtttgcctgggcaaagacgatctgtgttccagttgtgttcacgcaaaagggcaactg
acctgcaagtgtgaagttggctgggcggggtcaagagacggacttacctgtggacttgac
ggtgaccaagacggctatccagatgtatctctaccctgcaatggtacaaggtgtaaaaag
gacaattgtccgggtatccctaacagtggtcaggacgacacagacgaggatgagatggga
gacgcttgcgattacgacatggacaacgatggattacccaatgtcctggacaactgcccg
ctaacagtgaacgtggacgagacggacagtgacggagatggagtaggtgacgtgtgtgac
aactgtcccatgaacatcaacactgaccaacgggacgctgatagggacggtgtgggggat
gtgtgcgacagtgatgccgatgaagatggggtcatcgacaatcaagacaactgcccattt
atggccaatgcccaacagaaggattcagacggagacgggatcggagatgcctgtgacaac
tgcccaactgtcgcaaacgtggatcagtttgacttggatcagaattccatcggggatgct
tgtgtagacaatgatgacagggatgcagacggggtaccgaacagcttggacaactgtccg
gacatccccaacagtcagcagctggataccgacaaggacggagcaggggacgtttgtgat
gatgatgacgatgatgacgcaatattggatgacgtcgacaactgtcgcctcgtccccaac
ccggacaatgcagactttgatggagatggagtaggcgacgtctgtaccgatgactatgac
atggacggcgtcctagacgccgatgacgtctgtcctgagagtgaggtcatcgcccgcacg
gacttcaggaaccatcaaaccgtaaacctggccggcagcaccagcaacctgccggtgtgg
gagatcttcaatgagggagcagaaattgttcagacaatgaacagtgacccaggtctagtg
ctcggtccgaattacttcggcaacttggactacagtggaactttcttcgtcaacacccag
gctgatgacgactttgtggggttcgtcttcagctatcagagcaactcccgcttctacctg
gtgtcctggaaacaggcaggggacagcgagggaggacaggctggggtacagctgaagttg
gtagactcgacgaccggacctggtcatgacatgtcgctggctctatggaagggagtggag
gtcccgggacagaccaagctgctgtgggaggatcctaacaaagtggggtggagctacaac
accgcctaccgctgggagctgaagcaccgggcggacatcggactcagcaggttccacctg
tacgaaggcagccgccttgtggtggactcaggtgacgttcaggacgcctccctccgcgga
ggccgcctcggggtgtactgttactcccaggagaacgtcatctggtccgatctcgtcacc
aagtgcgatggtgacacttcatccgtgtaa
DBGET
integrated database retrieval system
