Branchiostoma floridae (Florida lancelet): 118424617
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Entry
118424617 CDS
T01074
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118424617
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118424617
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
118424617
NCBI-ProteinID:
XP_035689155
UniProt:
A0A9J7LXJ5
LinkDB
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Position
1:complement(4612119..4624327)
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AA seq
908 aa
AA seq
DB search
MVKVLVQNNADVNAIDSTNVTPIALATSRCSPELMFHLLSPRASGAFCVRTGQRSNGGLR
VRGNAGETTKDNLNNQDEMQRTPLMLAALFGDSDSLRLLLSTGADVRRADCDGRTVLHHG
VGHSRVLDILLQNKKAKRLLEKKDGAGCTPLHHAAQGGFDKNVRSLLAAGADRNSRNNNG
ETALHEAARHGRLNVIKTLLRGSGREGKPGDSIKVRLVNTANSRGMRPLHLASKYGHPEV
VRYLLDNHAAITQTMDGTSPLHYAVRSGNQKTVDSLLDVHYDCLNWEDDNGNTPLHVAAK
EDLPEIVTLLLTDGAIVAENHQKENALDVAINKGSVDAALAMGRHARWADLLRQEDRAQL
PHLVVEMPTVAEEFLNRFCVEKTVPEGDKEGNNYKVLAYDFSYMYGRREGLSFLKAITRN
RRWQCLQHPIVEKFLKVYWEKIGFQIFLATLVVYMIFLGCLTTLVMMQASMISQTREAAN
ITTEQAANCYNITLLCDLSETLCVLSYLVLVFAAIGLIKDVYNLIRQGLDFLTVSNMLDF
IMCLAALLYTLPAKLPLPMHPCVKAYAATIAVFLAWIMFVLVLRRIYVFGLYIIMIGSIF
ITMIRVVLVFIIYLFAFCFSFFYLVTIADTSLGSGFDDFPRTFYTLLSMMMGELDINSNF
KLGVNTRNSITLALLLIFIVVMCIIIVNLLVGLAVGDIKAIREAARLGHLQIQAEYMLHK
EWGISLFLRRFQIMHYNEKKGSRKKMSLITRIVPHQLRELFDVGKEFEEAKSCSCHEILE
ETRASLEARLKEVMSSLSNVQHDLSQLSKLTSQEQLSSTSLNATPGDEDDDDVGHVDDLI
DEYRRNENKLYRQHSTEGDEGFRPRVGSSVSILRKLRGKSRRNVSVIKEDNEGENAEDEG
AESYTTKL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggtgttggtccagaacaacgcggacgtcaacgccatagactccaccaacgtg
acgcccatcgcgctggccacgtccagatgttcacccgagctcatgttccacctgctcagc
cctcgggcttctggtgctttctgtgttcggactgggcaacggagcaacggtgggctcaga
gttcgaggaaacgcaggcgagacaacaaaagacaatctaaataaccaggacgagatgcag
cgcaccccgttgatgctggcggcgctgttcggtgacagtgactccctgcggctgctgctg
agcaccggtgcagacgtgcggagggcggactgtgacggcaggaccgtcctgcaccacggc
gtgggacactccagagtgttggacattctactccagaataagaaagccaagcgcttattg
gagaagaaggatggagccggatgtacaccactgcatcacgcggctcagggtgggttcgac
aagaacgtcaggtcattgctagcagctggcgcagaccgcaactccaggaacaacaacggg
gaaaccgcacttcatgaggcagccagacacggacgcctgaacgtcataaagacgctgctg
cgcgggagtggacgtgaggggaagccgggagactccatcaaggtccggctggtgaacacc
gccaactcacggggcatgcgaccgctgcacctggcgtccaagtacggtcatccagaggtc
gtgcggtacctgctggacaaccacgccgccataacacagaccatggacggcaccagcccg
ctccattacgccgtgaggagcggcaatcagaagacggtggattctctgctggatgtccac
tatgactgtctgaactgggaggacgataacgggaacacgccacttcatgtagcggccaag
gaagaccttcccgaaatcgtgacgctgctgttgacggacggagcgatcgttgcagagaac
caccaaaaggagaacgcgctggacgtcgctatcaacaaggggtcggtggacgcagctctg
gccatggggagacatgcgcgttgggccgacctcttgcggcaggaggacagagcgcagctg
cctcatctggtggtggagatgcccaccgtggctgaggaatttttgaatcggttttgtgtg
gagaagaccgtaccagaaggagacaaagaggggaataactacaaggtcttggcgtatgac
ttcagctatatgtacggaagacgcgagggcttgtcctttctcaaggcgatcacaaggaat
cggcgctggcagtgcctgcagcatcccattgtggagaaattcctcaaagtttactgggag
aagattggcttccagatattcctggccaccttagttgtgtacatgatcttccttggctgc
ctgacgacgctggtaatgatgcaagcttcaatgatctcacaaacgcgcgaagctgccaac
atcacaacggaacaggccgcaaactgttacaacatcacactgctgtgtgacttgtcagag
acgctgtgtgtgctctcgtatctggtcttagtattcgcggccatcggtctcataaaggat
gtgtacaacctcattcgacagggcttggatttcctgaccgtcagcaacatgctggatttc
atcatgtgccttgctgctcttctgtacacacttccagcaaaactcccattacctatgcat
ccatgtgtgaaggcgtatgctgccaccattgccgtgttcctggcatggatcatgtttgtt
ctcgtgctcagacggatctatgtatttgggctgtacatcatcatgatcggcagcatcttc
atcacgatgatcagggtggtgctggtgttcatcatctacctcttcgccttctgcttctcc
ttcttctacctggtcaccattgcagatacgtcattggggagtggctttgatgacttcccg
aggaccttctacacattgctgtctatgatgatgggggaactggacatcaacagcaacttc
aaactcggggtgaacacgagaaactccatcactctggcactcctgctgatcttcatcgtc
gtcatgtgcatcatcatcgtcaatttgctggttggtctggctgttggggacatcaaagca
atcagggaggcagccagacttggtcatcttcaaatacaggcggagtatatgttgcacaag
gaatggggcatcagtctgttcctccggcggttccagatcatgcattataacgaaaagaag
gggtccaggaagaagatgagcttgattaccagaattgtacctcatcagctgcgtgagctg
tttgatgtgggcaaagaatttgaagaagccaagtcctgctcatgtcatgagattctggag
gaaacaagagcgagtctggaagcaaggctgaaggaggtgatgtccagtctgtcgaatgtt
cagcatgacttgagccagttatccaagctaacatctcaagagcagctcagctcaacatcg
ctgaacgctactccaggagatgaagatgatgatgatgttggccatgtggatgaccttata
gacgagtaccggcggaatgaaaataagttataccggcaacactccacagagggtgacgag
ggctttaggccaagagtcggcagcagtgtaagcatccttaggaaactccgcggaaaatct
cgcaggaatgtcagtgtcattaaagaggacaatgaaggggaaaatgcagaggacgaaggg
gcggaatcttacactacaaagctctga
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