Branchiostoma floridae (Florida lancelet): 118424691
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Entry
118424691 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118424691
04121 Ubiquitin system [BR:
bfo04121
]
118424691
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118424691
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
118424691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
118424691
NCBI-ProteinID:
XP_035689265
UniProt:
A0A9J7LW14
LinkDB
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Position
10:5366382..5405601
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AA seq
1107 aa
AA seq
DB search
MEASGNVATGDQKKQTDSEEIRRQQNSRSQRQAAQGRGRGWREQGNGERRGQGKSKGEQR
EDKGSRHRKNTERPQDTKEKHNLSHQTGKKSDNSFPQGAEGQSFESSGKQVTAQDIGDLL
SVIDNINAKGGKQNVVKPASQSRFERRGSGSVPRGRDKRPDRSGAGEDDWKRRPHSGKDY
RKGKNSSRGYEDSTPENSLYYYMPKQRKKQDKDEKGKEGNLVYKNESTVEEFPVELQDVR
YERSQQNQIGLGARGGFRNGFDRKSRPGGGESRQSWRRGDDLAVGGIQQRAPDKRRDKMK
KLDPESQTASLIEQLQTNSYECMVCCDVIRREAPLWSCKSCFHMFHLRCIKKWARSPAAS
LEGQDNGWRCPACQNVTRKVPNAYKCFCEKVWEPEYVRNDTPHSCGDVCGKKKDQDCPHL
CTMLCHPGPCPPCPVMVTKSCHCGKTKQSVRCSQGTTIKCGTPCGKKLNCSVHTCEDICH
AGDCQPCAVILTQACYCGRVVREVVCGGEEWTGEDVDGDGSSFSCKNVCDRELECGHHTC
EELCHSAPCPPCPKLPSQVKFCCCGQTTVDKLEELGENGSRKTCLDPLPTCRKTCNKPIG
CGSDESDEIHLCQKTCHAGKCGPCEGTTKLTCRCGWKTQELPCKDVKGRSVEDEFLCDKR
CNKKRKCGRHKCGQPCCVELDHTCPFVCGRKLSCGLHRCEQPCHRGNCEPCWQTSFEELY
CHCGASVLFPPVPCGTPPPECHRMCSRQHSCEHQVQHTCHSDDKCPPCTFLVQRKCMGQH
ELRNNVPCHITDISCGRPCNRLLPCGVHQCLRICHKDECVREDELCEQRCSKPRQECGHP
CGAPCHQGTLCPRTPCRAKVTVRCKCGLRSEKVQCSETQLEHAFQRLTTSTLATRWGDMQ
AGQSVDISALVKMGKDGKKILELDCTEECAVYERNKRLAMALQIENPDTSSKLGPPPYTE
FLKEQASKNKSLVSSVEDALTKLVQTAKESKQKSRSHAFPPMKREDRRVIHELSEFYGIE
VMSYDVEPKRNCVATAYRDRCWLPAASLVSVVERESNPKPPPPIPHHITDKGAIGKSSQH
TVIPAKNAWRGPSKEPDVEVIDYFDMD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtctggaaacgtcgcgacaggtgatcaaaagaaacagactgattcggaggaa
atccgaaggcagcagaactctcgaagtcaacgccaagcagctcagggcagaggcagagga
tggagagaacaagggaatggggaaagaagagggcaaggaaagagtaaaggagagcaaaga
gaagacaaaggcagcaggcacaggaagaatactgaaagacctcaggatacaaaagagaaa
cacaatttatcacatcagactggcaagaaatcagataactcgttcccacaaggagccgag
ggtcaaagctttgaatcttcgggaaaacaagtcacagcccaagatattggggacttgtta
agcgtcattgataatatcaacgcaaagggtgggaaacaaaatgtagtaaagccagcgagc
caatcccggtttgagagacgtgggtcagggtcagtgcctagaggcagagacaagaggcct
gataggtctggtgcaggtgaagatgattggaagcgccggccacatagtggaaaagactat
agaaaaggaaaaaattcaagccgaggctatgaagactctacaccggaaaattctctatat
tattacatgccaaaacaaagaaaaaaacaagataaagatgaaaaagggaaagagggaaac
cttgtatataaaaatgaaagcacagtagaagaatttcctgttgagttacaggatgttaga
tatgaaagaagccaacagaatcagataggtttgggtgcaaggggtggatttagaaacgga
tttgatagaaaatctagaccaggtggtggtgagtccagacagagttggcgcagaggagat
gaccttgcagttggtgggatccagcagagggcaccggacaagaggagggacaagatgaag
aaattggaccctgagtcacagacagcttccctgatagagcagctccagaccaacagctat
gagtgcatggtgtgctgtgatgtcatcaggagggaagctccactctggagctgcaagagc
tgctttcacatgtttcatttgcggtgtattaaaaagtgggcgcgctcgcctgccgccagt
ctggagggtcaggacaatgggtggagatgccccgcctgccagaatgtcacccgcaaggtg
ccaaacgcttacaagtgcttctgtgagaaggtatgggagcctgagtatgtgaggaatgac
acaccacactcctgtggagatgtctgtgggaaaaagaaggaccaggactgtccacatctc
tgtaccatgctgtgccacccaggtccctgtccaccatgtcctgtcatggtcaccaagtca
tgtcactgtggaaagacaaagcagtctgttcgctgttcgcaaggcacaacaatcaagtgt
ggcaccccttgtggaaagaagctgaactgcagcgtacacacctgtgaggatatctgccat
gctggagactgtcagccatgtgctgttatcctaactcaagcttgttactgtggcagggta
gtcagggaagtggtgtgtgggggtgaggagtggacaggggaggatgtggatggggacggg
agcagcttttcctgtaagaatgtatgtgacagagaactagagtgtggacatcacacctgt
gaggagctgtgccacagcgccccctgtccaccctgccccaaactgccatcacaagtcaag
ttctgctgctgtggccagaccactgtggacaagctggaggagcttggggaaaatggcagc
cgcaagacgtgcttggatcccttaccaacctgcagaaaaacctgcaacaagcctattggt
tgtggatctgatgagtctgacgaaatccacttgtgccagaagacctgccatgcagggaag
tgtgggccttgtgaggggactacaaaactcacctgcagatgtggatggaaaactcaggaa
ctaccatgcaaagatgtcaaaggtcgatcagtggaagacgaattcctgtgtgacaaaagg
tgtaacaagaaacggaagtgtgggcggcacaagtgtggacaaccctgttgtgtggagtta
gatcacacctgtccgtttgtgtgtggcaggaagctgagctgtggtttacacaggtgtgag
cagccgtgccaccgagggaactgtgaaccttgctggcagacaagtttcgaggagttgtac
tgccactgtggagcatcagttctgttccccccggtaccctgcggcacacctcccccagag
tgccaccgcatgtgttcccgtcagcacagctgtgagcaccaagttcaacacacctgccat
agtgatgacaagtgccctccctgcaccttcctcgtacagaggaaatgtatggggcagcat
gagttgagaaacaatgtgccttgtcacatcactgacatctcctgtggacgaccctgcaat
agactcctcccctgtggtgtgcatcaatgccttcgcatctgccacaaggatgagtgtgtg
agagaagacgagctgtgcgagcagcgctgtagtaaacctcgtcaggagtgtgggcatccg
tgtggtgcaccttgccaccagggcactctctgtcccaggactccctgcagggccaaggtg
acagtgaggtgcaaatgtggattgaggagtgaaaaagtacagtgtagtgagacccagcta
gaacatgccttccaaagactgaccacttccaccctggccacacggtggggagacatgcag
gctggacagtcagtggacatcagtgccctggtcaagatgggcaaagacggcaagaaaatc
ttggaattggactgtactgaggagtgcgcagtgtatgagcgaaacaagagactggccatg
gctctgcagatagaaaacccagacacgtcttccaagctgggaccacctccttacacagaa
tttctcaaggagcaggccagtaaaaacaagagccttgtgtcatcggttgaggatgctcta
actaaactggtccagactgcaaaagagtcgaagcaaaagagtcgtagccacgcttttccg
cccatgaagcgggaagatcgcagagtgatccatgaactgtcggagttctatggtattgaa
gtgatgagctacgatgtggaacccaagcggaactgtgtggccacagcttacagggatcga
tgctggctaccagctgcatccttggtaagtgtggtggagcgggaatcaaaccccaaacct
cccccacccatacctcaccatatcactgacaaaggagcaataggaaagtcttctcaacac
acagttatcccagcaaagaatgcctggagaggtcccagcaaagagcctgatgtagaggtt
atagattacttcgacatggactag
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integrated database retrieval system
