Branchiostoma floridae (Florida lancelet): 118424834
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Entry
118424834 CDS
T01074
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118424834
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118424834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118424834
Cell adhesion molecules [BR:
bfo04515
]
Integrins
Integrin alpha subunits
118424834
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
118424834
NCBI-ProteinID:
XP_035689527
UniProt:
A0A9J7LUG3
LinkDB
All DBs
Position
10:14953216..14961267
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AA seq
684 aa
AA seq
DB search
MRELATLAGEQMGSYFGYSVCVQDVNGDGVDDVLVGAPMWTDKELPENGWERGRVYIFHQ
LRSYGSRVRFNIAPTLIGEGAGERFGLSMVGLGDISKDGYNDVAISAPYGGENSDGAIYI
FNGSPYGLRTEYSQKISADDVVPGISTFGFSMSASADIDGNQYRDLIVGAHASDMAIVLR
TRPVLRVHSTVTVEPKVIDLENKLCKLRDGTAVPCFNITECFRYDGIAVPLNIELQYETV
LDKMRFSNSRADFLGRTDVIKLIRLTQGVRKCEKSQAYIRPDLRDKLTPIEVSVTHSLDD
RPGVVLPPILDHHARHTVSDQTNILKECGRDNICDTDLRITVSSERKDILIGTPYDFIMH
IEVWNAGEGAYEAVMTMDVPDEVDYIGFHKKSKDAQVSCTNDFGAVKCELGNPMEANETI
GIFLRLSVSRLSGMNDSISFVVQANSSNVEDQFSNFDNEAILTLPVRAYANVGLRGVSIP
EQVIVKMKTEKQTDTNGESGPVTVPPPSQPEFRHIYEILSTGPSTIGKSELKVYFPMKTV
EGDNFISLGNITVEGDGQCLVTRMLGLSEFNITTVQVGQLSATAPPIDVDKQWQELQTRK
RRQVSKAAVREQLDCTTARCMLITCIFGPLKRNSIAIVRLNSFLRLSSHVRNFISLPPRL
LGDMMGQLLRIFVSSCPLTLILLL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagctggcgaccctggcgggagagcagatggggtcgtacttcggctactccgtg
tgcgtgcaggacgtcaacggggacggtgtagacgacgtgctggttggagcacccatgtgg
acagataaggaactgcctgagaacggctgggaacgcgggagggtctacatcttccaccag
ctcaggtcatacggatccagggttcggtttaacattgcccccacactgatcggtgagggt
gctggggaaaggttcgggctgtcaatggttggactaggcgatatcagcaaggacggttat
aacgatgtcgcgatttcggctccgtacggtggggagaactctgacggcgctatctacatc
tttaacggatctccgtacggcttaaggacggaatactcacagaaaatttctgctgatgac
gttgtgccagggatcagtacgttcggtttctccatgtcggcatcagcggacattgacggt
aaccagtaccgagacttgatcgttggtgcccacgcttccgacatggccatcgttctgaga
acaaggccagtcctgagagttcacagcaccgttacggtggagccgaaggtcattgacctt
gagaacaagctctgcaaattgcgagatggtacagcggtgccatgtttcaacatcacggag
tgtttccgatatgatggaatcgctgtgccactgaatatagaactgcagtacgagaccgtt
ttggacaagatgaggttttcgaactcccgcgccgatttcctgggtcgcactgacgtcatc
aagttgattcgactcacgcagggagtgcgcaagtgcgaaaaatcacaagcctacatccgg
cctgacctccgagacaagttaacgcccattgaggtgtccgtcacgcacagtctggatgac
cggcctggcgtcgtgcttcctcccatcctggaccatcacgcgcggcacactgtttctgat
cagacaaatatcctgaaggagtgtggcagagataacatttgtgacacggatctaagaata
acagtttcaagtgagagaaaagacatcttgatcgggactccgtacgacttcatcatgcac
atagaggtgtggaacgccggggagggcgcgtacgaagccgttatgaccatggacgtgcct
gacgaagtggactacatcggcttccacaagaagtctaaggacgctcaggtctcctgcacc
aacgacttcggggccgtgaaatgtgaactggggaaccccatggaagcgaacgagacgatc
ggtatatttctgagactgtccgtttctcgcctgagtggcatgaatgattcgatatcgttc
gtcgttcaagcaaacagttccaacgtagaagaccaattctccaactttgacaacgaggct
attctgacgttacccgttcgtgcctacgctaatgtcggactccgtggggtttccatcccc
gaacaagtcattgtgaaaatgaagacggaaaaacagaccgacacaaatggcgagagcggc
ccagtaacggtgccccctccttctcaacctgagttcaggcatatttatgagattttaagt
acaggtcccagcacaataggaaagtcggagctcaaagtgtatttcccgatgaaaacggta
gagggcgataatttcatctccctggggaacatcactgtggaaggagatgggcagtgtcta
gttacccggatgttggggctgtcagaatttaacataacgacagttcaggttgggcagctt
tcggccacagcgccacctatcgacgtagacaagcaatggcaggagctccagacgagaaaa
cgtcgccaagtctccaaagctgctgttcgagagcagctggactgcaccacggccaggtgc
atgctgatcacgtgtatattcggtccgctgaagaggaacagcatcgcgatcgtgcgactc
aactctttcttacgtctcagcagtcatgtaagaaacttcatttctttgcctcctaggctt
ttaggcgacatgatgggccaactccttcgcattttcgttagctcatgtcccttgaccttg
attctactcttgtga
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