Branchiostoma floridae (Florida lancelet): 118424905
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Entry
118424905 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118424905
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118424905
04091 Lectins [BR:
bfo04091
]
118424905
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118424905
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118424905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
MAM
PKD_channel
F5_F8_type_C_2
REJ
PLAT
F5_F8_type_C
GPS
Ion_trans
EGF
hEGF
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
118424905
NCBI-ProteinID:
XP_035689640
UniProt:
A0A9J7LWP0
LinkDB
All DBs
Position
1:complement(33512037..33546151)
Genome browser
AA seq
2310 aa
AA seq
DB search
MGGANIALGRTAYQTSRFRNSGPAQRAVDGNTDGDYMSGAGSCIHTNRESNPSWWVDLGQ
SYVVIRVDVFNRQDCCPERLNPFNIHIGDSDQVIANPKCGGDHRIDISQPSISVSCLGMK
GRYVGIRLVASYQPLTICEVQVVSESAWLKRDSSWVVENNGDATKALDGEDGTYWNPQVN
WYIILDLAAPKTLARIAVNNYGDVTHDITAFTLQMSQVGSPYNWEDVVTVDNVLGGTAQR
QEFGGFQETARYWKFVVDRTHGNVQPWLKELYLYGITFDENGHYMYINTSSPRVEGDRAL
LYSPTVTTTCTMYLRFWYHMYGSAIETLNVYVRTDSSLPAVPVFTRTGEQGNQWLSAEVE
ISTTGNYYVVIEGISGSDITGQIALDDITLETGHCATGGCHSRPCQNYGTCVEDATTATG
YVCLCLDGWEGQNCTQDVDECQSSPCGPGTCHDRLNGYLCQCPWSYQGTHCKAPDDLPVN
CSRLGVCENTAPDENTAGSCMVYASMVEGIWRYDGRMSLVYRAENVIHGDVDLTGCPGGV
ITRYGWSILKEVLSDGAAVYKLPNLNIKADEEDLVLPGQLLQPWKYMIQFQVTVQDNSTD
MKIYSVAQTWVEVFAAPLVVTLGSALVTRYAHDDIWVSAEGSWDPEGLTHPSVWHYTWTC
SQNRGGTIEDCAAVETDSRPGALYLGNSLPANTTFRVTVVASHPGRSEVAASQTITLHDN
AACQLSIACDSNCDQTRLNLTAPLLLKAVPGTNTTAMYQWSVVGSPEASTGLPSTVDVTR
ETLLVEANTFKAGESYIIRLVNHIQDCSPEGAVSTWAFRVRPEGPRLGSNSTNCSIHRNS
STGCVCCEEIVDELGPVTYKFQIIAPYEKDRGQVQFPPDSDFVMTPLPLTPFETMIPRYC
PDVLPQDELTVRLWVSGTDGRIVAEKKITEALSEEQAAFSDDVIEVISRSEMKDLGTIQN
VATFVTLASAKNVTLASKAKAAKTLQATADALKNMTESGSSVSVEEVNILTCTMFTGTTH
MLEDSSNVSSNAEDTEKVAEFRPQKSGTALSIHLDVEQTPEPRDIRLVLLNVSSAPIPEN
YDNVSFTTVLPVPRNELFTLPTLHNGPQVNLTASPYSWLILPEEGPIMDYQSVSNTSYYL
YMLYDTKDAISRAKVTSKFTVSILETACLYFGEESQQWLSDGCKVGPLSNTTHIHCQCDH
LTKFSGFVPPNPLRFDKVFSASISENTVGLIAVLTVFGLFLMGCLLGRKADRADLQKIGV
TIPTGLRLNSDPENHYVITIYTGYRSGAGTTAQVSVVLFGFMDESEPLHLCDDRRVLFQS
GSEDSFLVSTERRLGPLTHVHVWHNNAGFSPGWFLSRVVVKHVHSGQQDYFICNKWLALD
EDDGRINRMIFVASPEELSNISNLIMSRMSKDTHDGHLYYSMVGRPARSSFSRVQRLTCC
MCTVYCTMATNIMFYRQGDKYDPPEPIRFMGVEFQLPISLPEIMISVQSAAMILPVTSAI
VFLYRNASPRPPKASPTALTEPHVVYRGQRPGTTSVLQPEELSSDEPTRMPSRPVKSAVA
LPSGLMERRPAVRHLRPTPSRTDPDVGAIDVMMQERSSDSSPTDADIKPKTGLKLPWWAS
WLAGALALSVSFVAAFFVVLYSLSFGRVKAEAWLITFVTSFVTDMFLLQPVKLMAAAVSI
VLIFRKPDNDDDLPPAATTDDEEYLDVLPQPLPSYKMRTELPGNDVLDEDRARRLRKKKI
RSALKEVLLYGMFVCVLMLMSFGERSSQAFHMNKAINGFVMDSSKGTAFSTISDVTPFWQ
WVDTTLIPATHSPPWYNRQTSKHGLYLPDHMTHLIAPLRFRQVRMRQEQQCTIPDTMANV
SARCLDSYSVRNGDTSNYNGSWDAPINPNHTLTDDNSMAQSPWYFTYGNVADGFAYIGKH
GTYATGGYVATLNWTFDGSINISTNLQTNNWLDEKTRAVFIEMTLYNPHANLFSVVAMVT
EFSITGGVSMAPEMTTFRLHHEDQVTLLVLRVAMALFMLYYLIVAVMNFNARPLEYLTEA
GSWLEIFIVFSTAASLGLYFRAQGAIDDITRHGHQMFESYHKAAAWYQMYTYSLSFLICC
SLLKFIRLLRFNNHVYSLLNTMNKTAKPLFNFLIIASIIFTAFALAAHLTLGLNLKEYST
LLATYESLFGMMLGSFTFERLQEGSALFGPALFVFFQCTVQFFLLTMFMSIIMDVYAKSR
EVVNPDQLEIMQVLKDEATEAINKLRSSAKTQKDCRPDPEKVPRVTLQDQIQNAIVEMEK
QNAMEEVEKHRQPRERRIHFLGNDEVYIRK
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atggggggtgccaatatcgccctggggaggacagcataccagacaagcaggtttcggaat
agcgggcctgctcagcgggctgtagacgggaacaccgatggcgactacatgtccggggca
ggttcctgtatacacaccaacagagaatctaatcccagctggtgggtggatcttggccag
tcgtatgtggttatcagagtggacgtctttaaccgccaagactgttgtcctgaacgactc
aaccccttcaacatccacatcggggattctgaccaggtcatcgcaaaccccaagtgtggt
ggtgatcatcgaatcgacataagccagccgtccatctccgtctcatgtctggggatgaag
ggtcgatacgtgggcatccgtctggttgcatcctaccagccgctgaccatttgtgaagtc
caggtagtttcggagagtgcatggctgaaacgggattcatcatgggttgtggagaacaac
ggagatgccacaaaagctttggatggagaggacgggacctactggaatccccaggtcaac
tggtacatcatactggaccttgcagcgcccaaaactctggcccgcatcgcggtcaacaac
tacggagacgtcacccacgacatcacagccttcaccctgcagatgtctcaggttgggagt
ccgtacaactgggaggatgtggtgaccgtcgataacgtgctgggagggacggcccagcgc
caggagttcgggggtttccaggaaacagcgcggtactggaagttcgtggtggatcggacc
cacggaaacgtgcagccatggctgaaagaactctacttgtatggaatcacattcgatgaa
aacggccattacatgtacatcaatacatcctccccacgagttgaaggtgacagggcactc
ctgtacagccctacagtcaccaccacctgtacaatgtacctgcgcttctggtaccacatg
tatggcagtgccatcgagacgttgaacgtgtatgtacggacggactcttctcttccagcg
gtccctgtcttcactaggacaggcgagcaggggaaccagtggctcagtgctgaagtagag
atcagcaccactggcaattactatgtggtgatagagggaatcagtggatcagacattact
gggcagattgcactggatgacatcacactggaaacgggtcattgtgcaacaggtggctgc
catagtagaccgtgtcaaaactacgggacttgtgtcgaagatgcaacaactgcaacagga
tatgtttgcctctgcttggatggatgggaggggcaaaactgcacccaagatgtagatgag
tgtcagagcagtccctgtggccctggcacctgccatgaccggctcaacggttacctctgt
cagtgtccctggagctaccagggaacccactgcaaagccccagatgatttgccagtgaat
tgttcaagacttggagtgtgtgagaacactgcaccagatgagaatactgcaggcagctgt
atggtgtatgcctccatggtggaagggatttggaggtacgatggacgcatgagtctcgtc
taccgcgcagaaaacgtcatccacggtgacgttgacctgacgggctgccctggtggtgtc
atcaccaggtacggatggagcattctcaaggaagtactgagtgacggagctgctgtgtac
aagctgccaaatttgaacataaaggcagacgaagaagatttggtgctacccggccagtta
ctacagccttggaagtacatgattcagtttcaggtcactgtgcaagacaactccactgac
atgaaaatatattctgtggcacaaacatgggtcgaggtgtttgcagcaccattggtggtt
acgttagggtcagcgcttgtcacccgttacgctcacgatgacatttgggtgagcgcagag
gggtcttgggacccagaaggtttaacccacccatccgtgtggcactacacttggacatgc
agccagaatcgtggcggaactattgaagactgtgctgcagtagagaccgacagtcgacca
ggagcgctgtacttagggaacagtctgccggcgaatacgacattcagggtcacggtcgtg
gcctcccatccagggaggagtgaagtcgctgcgtctcagacgatcaccctccatgataac
gcagcttgtcaattatccatcgcgtgtgacagtaactgtgaccagaccaggctgaacctg
acggcccctctcctgctcaaggctgtccctggaacaaacactaccgctatgtaccagtgg
tcagttgtggggtccccagaggcctctacaggcctgccatccacagtagatgtgaccagg
gaaactcttcttgtagaagcaaacacgtttaaagctggggaaagctacatcatacgctta
gtcaaccacatccaagactgcagccctgaaggtgctgtttcaacatgggcatttcgcgtg
agacctgaaggcccccgccttggcagcaacagcactaattgtagtatacaccgcaacagt
tcaactgggtgtgtctgttgtgaagaaatcgttgacgaactcggcccagtgacttacaaa
tttcagatcattgctccatacgagaaagacaggggccaagtacagtttccacctgacagc
gactttgtgatgactccgttgccactaacgccttttgaaacaatgattccaaggtactgc
ccagacgtcctaccacaagatgagctcaccgtacgactttgggtctcaggcactgatgga
cgaatagtggcagagaagaagattacagaagccttgtcagaagaacaagcagctttttct
gatgatgtcattgaggtaatctccaggtctgagatgaaagacctgggtacaatccaaaac
gtcgccacatttgtgactctggcttccgccaagaatgtgactttagcatctaaggctaag
gccgcaaagacacttcaggcaaccgctgatgcattgaagaacatgacagaatctggatca
tccgtgtcggtggaagaagtaaacattctgacatgcaccatgtttacaggaacgacccac
atgttggaagactcatcgaatgtgtcttctaatgccgaagacaccgagaaggttgcagag
ttccgaccgcagaagtccggaactgcactcagcatccacctggacgttgagcaaacccca
gagccacgagatatccgcctagttctgctgaacgtgtcatcagctccgattccagaaaac
tacgacaacgtcagcttcacaactgttctgcctgtgccacggaatgagttgttcacgcta
cctacactgcacaatggcccgcaggtcaacctaacggccagtccctactcctggctgata
ctccctgaggagggacctatcatggactaccagagcgtgtccaacacttcttattattta
tatatgctctacgataccaaggatgccatttccagagccaaggtgacgagcaagtttaca
gtcagcattctggaaactgcctgcttgtactttggagaagagtcacagcagtggctgagc
gatggatgcaaggtgggtccactgtcgaataccacccacatccactgccaatgtgaccac
ctgaccaagttttctggattcgtgcccccaaacccactgcgatttgacaaagtgttcagc
gccagtatttctgaaaacaccgttggacttatcgccgtcctcacagtttttggactgttt
ctgatgggctgccttttggggaggaaggccgacagggcggatcttcagaaaattggtgtg
accataccaaccggtctccgtctgaactctgatcctgaaaaccattacgtcataacgatc
tacacagggtacagatcaggcgctgggactactgcacaggtttctgtcgtcctgtttggt
ttcatggacgagagcgagcccctccacctgtgtgacgacaggcgggtgctgttccagagc
ggcagtgaggactccttcctggtgtccacggagagacgactgggcccgctcacacacgtc
cacgtctggcacaacaacgctggcttcagccctggatggtttcttagtagggtcgtggtg
aagcatgtgcattctggtcagcaagactacttcatctgtaacaagtggctggctttggat
gaagatgatggcagaatcaaccgcatgatttttgtcgcgagtccagaagagctgtccaac
atatcaaacctgataatgagcaggatgtcaaaagacacccatgatggccacctttactac
tccatggtcggccgtcccgcccgcagcagcttcagccgtgtgcagcgcctgacgtgctgc
atgtgcacggtgtactgcaccatggccaccaacatcatgttctacaggcagggagacaag
tacgacccaccagaacccatcaggttcatgggcgtggagttccaactcccgatcagctta
cctgagataatgatcagcgttcaaagtgctgcaatgatcctacctgtgacgtctgccatc
gtgttcctgtacaggaacgcgtcacctcgcccaccaaaggcctcacctacagcactcaca
gagccacacgtggtttaccgcggtcaaaggcccggcacaacctcggttctccagccagaa
gaactctcatctgacgaaccaaccaggatgccctcacgcccagtgaaaagtgcagtcgcc
ctgccatccggcctgatggagaggcgtcccgccgttcgccacctccgcccaactccgagt
aggactgatccggatgtgggggcaatcgacgtcatgatgcaggagaggtcctctgactct
tctccaacagatgcagacataaaaccaaagactggactcaaattaccatggtgggcatca
tggctagctggagctctagcgttgtctgtgagctttgtggcagcgttcttcgtcgtgctg
tactctctgtcatttggccgcgtcaaggcagaggcctggctcatcacgtttgtcacgtcg
tttgtgacagacatgttcctactgcagcctgtcaagctgatggcggctgctgtcagcatt
gtgctgatatttaggaaacctgacaatgatgacgacctaccgccagctgcaactacagat
gacgaagagtaccttgatgttttgcctcaacctctaccctcctataaaatgcgtaccgag
cttccgggtaatgacgtccttgatgaggacagggctcgccgcctccggaaaaagaagatt
cgcagcgccctgaaagaggtcctgctgtacggcatgttcgtgtgcgttctcatgttgatg
tcctttggcgagcgaagcagtcaggcgttccacatgaacaaggctatcaacggttttgtc
atggacagctccaaaggcactgcattctctacgatatcagacgtgactccattttggcag
tgggtggacaccaccctgatccctgctacccactccccaccatggtacaaccgtcagaca
agtaaacatggcctgtatcttcccgatcacatgacacacctcatcgctccactgcgattc
cgacaagtccgcatgagacaagaacaacaatgcaccattccggacaccatggcaaatgta
tcagctcgctgcctcgatagctactctgtacgaaacggcgatacttccaactacaacggc
agctgggatgcaccaatcaacccaaatcataccctcactgatgacaacagcatggcacag
tccccgtggtatttcacgtatggaaacgtggctgatggttttgcatacatcggaaagcat
ggcacctacgccacaggtggctatgtagcgaccctcaactggacattcgacgggagcatc
aacatatctaccaacctacaaactaacaactggctggacgaaaagacccgagcagtcttc
atagagatgacgctgtacaatccccatgcgaacctgttctcagtggtcgccatggtaacg
gagtttagcatcacaggaggcgtgtccatggcacctgagatgacgaccttcaggctgcat
catgaggaccaggtgaccctgctcgtcctgcgagtggccatggcattgttcatgctctac
tatctcatcgtagcagtgatgaacttcaacgcgcggccgctagagtacctcacagaggcg
gggagctggttggagatcttcatcgtcttcagcactgcagcatcactcggtctgtacttc
cgagcccagggcgccatcgacgacattaccagacacggacaccagatgttcgagagctac
cataaagcagccgcgtggtatcagatgtacacttattccctgagctttctgatttgttgt
tccctgttgaagttcatacgcttactgaggttcaacaatcatgtctacagcttgctgaat
acgatgaacaaaacagcaaagccattgttcaatttccttatcatagcaagtatcatcttc
acggcatttgctcttgctgctcaccttaccctgggcctgaatttgaaggagtatagcact
ctcctggccacctatgagagtctgtttggcatgatgttggggtcatttacctttgaaagg
ctacaggagggctctgcattattcggaccagccctgtttgtgtttttccaatgtaccgtc
cagtttttcctgctcaccatgttcatgagtatcatcatggacgtatacgccaagtctcga
gaggttgtaaatcctgaccagttagagatcatgcaggtcttaaaagatgaagcaaccgag
gctatcaataagcttaggtcttctgcaaaaacgcaaaaggactgccggccagatccagaa
aaggttccacgagtgaccctacaagatcagatacaaaatgccattgtagaaatggagaaa
caaaatgccatggaggaagtggagaaacatcggcaaccaagagaaaggcgcatccatttt
ctcggcaatgatgaagtatatattcggaaataa
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