Branchiostoma floridae (Florida lancelet): 118424948
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Entry
118424948 CDS
T01074
Name
(RefSeq) partitioning defective 3 homolog B-like
KO
K04237
partitioning defective protein 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04144
Endocytosis
bfo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118424948
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118424948
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118424948
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118424948
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Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
118424948
NCBI-ProteinID:
XP_035689648
UniProt:
A0A9J7LWN2
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Position
10:15350633..15407823
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AA seq
1157 aa
AA seq
DB search
MKVTVCFGHTRVVVPCGSGELPVRELIEKAADRYRKAIGKSSDYWIHVKNLESDEGGILD
ADDQLCDVADDREKLIANYEEQDAPPVPHNGGDGTSASSVGTESPDIFQGDHDRGSFQHY
EDEGVDVSNAMLKKNTPLIVRRGSEPSLPTIISPIANSDGSKSEDSILQEHNLQSNKRWS
TAAIMDDVGNQSGGDPVANSTLIEPKRLQEIKENDRPGGNGGETLSAFSRFGRDSARQSI
LGNHPSMDRWAEAADQAHLKAETRKEPLGLSSDDSQESSDGSKIVDIDNDGGPLGIHVVP
YIDSSGRNFGLSIKNVEEGSKAAREAKLNNFDVIIEINGTSLLDATFDRAQQIFKGAMST
SVVSLRVCSEKPESSKFFPDQLVSDGKPAKPPIPRKPDLSLHDTGERSPDEPMTPTKKVP
PSVPPRSPTTTLSKTKPLLTSPTNTRRVGKKIHIQLTKGMDGLGFSVTTRDNPTGRNPIY
VKNVMNKGAAVEDGRLKAGDRIMEVNGIELTGKTQQEAVNMLRSIPIGGTVNLVVSRQDE
PVLPRELISYPPLPSYVYLHEDKPEDYAVSDVEDPRHGLTPRKTREYVTLEIPLNDTGSA
GLGVSVKGNKSKVDGADLGIFIKSIINGGAASKDGQLKVNDQLLYVNGESLVALPNNVAM
EQLRKSMSTDGNMRGSIQLVVARKIKQNNALPQTVEEPLNESSQWDQPIDIGANHTNRSS
TPGSEIGNGVSTSETSENSDITVVHREIQDSSDEAEEDDLEFHTAHPVLDRLKGQAYGVR
NESYQNALGRDSLGGRVTPRHSRDHSASSHSNELPMPSPIASNTKVSPTTNMTGETMLIE
NEGVQERTRKASSQHSGKNTPTLSSSSRSNEEEDLKGGAPEPPEWLVEWDKNQDEKSPGP
DDMGIPFTRDGFGRQSMSERHRGVKDAKQTDIYQKRQHKTKSMDLDDTDLPSNLAQQQKA
FGGLTSPVGDDSPGQLVRTNSADSIMSKTNLSNLGLPTSHTDPSLADTQDNSLDSPTRDI
GPSLGMKKSSSLESLQTAIQELVSEEDHDAMARPRVKAVRGRACNESFRAAVDRSYEAPL
PDVKSRPRMETSNQNLPRSYSMKESASESESHSGKEQGSSNRSSLVGDNIVLAETSFRKS
GKKKKEGLFKGLGSMFR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacagtatgcttcgggcacactcgcgtcgtggtgccgtgcggaagcggcgag
ctcccggtacgagaactcatcgagaaagccgccgacagataccgcaaggccatcggaaag
tcgtcggactactggatccacgtgaagaacctagagagcgatgaaggcgggatcctcgac
gctgatgaccaactgtgcgatgtggcggatgatagagaaaagttgatagccaactatgaa
gaacaggatgccccgccggtgccccacaatggcggagacggcaccagcgccagctcggtc
ggcacagagagccccgacatcttccagggcgaccacgacaggggcagcttccagcactat
gaggatgagggggttgacgtgtcaaacgctatgcttaagaaaaatacccccctaatcgta
cgacgaggaagcgagccatcactaccgaccataatctcgccgatcgccaactcggacggg
agtaagtcggaggacagcatcctccaggagcacaacctgcagagtaacaagcgctggtcc
acagcagccatcatggacgacgtgggcaaccagagcgggggagaccctgtggccaacagc
actctgatcgagcccaaaaggctacaggaaatcaaagaaaacgataggccgggtgggaac
ggtggggagacactgagcgcattctccagattcgggcgggactcggcgcgacagtccatc
ctcgggaaccacccgtccatggacagatgggcagaggcagctgaccaggcgcatctgaag
gcggaaacacgaaaagagcccctcggattgtctagcgatgactctcaggaaagcagtgac
gggtccaagatcgtagacattgacaacgatggaggacctctggggatacatgtagtacct
tatattgacagcagtgggagaaacttcggtctgtctatcaagaatgtggaagagggcagc
aaggccgctcgagaggcaaagttgaacaactttgatgtcataatcgagattaacggaact
tctctgctagacgccacctttgacagagcgcagcaaattttcaagggggccatgagtact
tcagtggtaagtctccgtgtatgctcggagaagccagagtcatccaagttcttccctgac
caactggtgtcggacggcaaacccgcgaagcccccaataccgagaaaaccggacctatca
ctgcacgacactggcgagagatcgccggacgaaccgatgaccccaactaagaaagtcccg
ccctctgtgccgccgcggtcgccgactacaacattatcgaaaacaaaacctttgctgacg
tcccccacaaacacgagaagagttgggaagaaaatccacatacagttaaccaaaggtatg
gacggcctggggttcagcgtaacaacgcgggacaacccgacgggacggaaccccatctac
gtgaagaacgtgatgaacaagggggccgccgtggaggacggaagactgaaagcgggggat
agaataatggaggtgaacggtatcgagctgacaggaaagacgcagcaggaagctgtgaac
atgctgcggagcatcccgatcggcggcacggtgaacctggtggtgtcgcggcaggacgaa
ccggtgttacctagggagctgatctcgtacccaccactcccctcctacgtgtacctgcat
gaagacaagcctgaagattatgctgtaagcgatgtcgaagacccacgccacggtctgacc
ccacggaagacacgggagtacgtcacattggagatcccactcaacgacacagggtcagcg
gggttaggtgtcagtgtcaaaggtaacaagtcaaaggtcgacggggctgacctgggaatc
ttcatcaagtcgatcataaacggcggtgcagcgtccaaggatggtcagcttaaggtgaat
gatcagctcctgtacgttaatggcgaatccctggtcgctctcccgaacaacgttgccatg
gaacagttacggaaatcgatgtcgacggacggaaacatgcgcggctccatccaactcgtg
gtcgcgcgaaaaatcaaacagaacaacgccttaccacagactgtcgaagagcctctgaac
gagagctcgcagtgggatcagccaatcgacatcggcgccaaccacaccaataggagtagt
acgccagggtcggagatcggtaacggcgtatcgacgtcagaaacgagcgaaaattccgac
atcactgtcgtacatcgggaaatacaggacagtagtgatgaggcggaggaggatgactta
gagtttcacacggcgcaccccgtgttggacagactaaagggccaggcgtacggagtacgg
aacgaatcataccagaacgcgctaggcagggattccctcggaggcagggtcacgccgaga
cattcccgcgatcacagcgcctcgtcgcactcaaacgagcttccaatgccgagtccgatt
gcgtcgaataccaaagtttcgcccacgacgaacatgacaggggagaccatgttgatagag
aatgaaggtgtacaggagagaacaagaaaagcgagcagtcagcacagcggaaagaacacg
ccgacgctgtcgtctagttcccgtagtaacgaggaggaggatctgaagggcggggccccc
gagcctccggagtggctggtggagtgggacaagaaccaggatgagaaaagcccggggcct
gacgatatgggtattccgttcaccagggatggcttcggccgacagagcatgtccgagagg
caccgcggcgtgaaggacgccaaacagacagacatctaccagaagaggcagcacaaaacc
aagagcatggatctggatgacacagatctgccatccaatcttgcgcaacagcagaaagcc
tttggtggcctgaccagtccagttggagatgacagtccaggccagctggtccgaaccaac
tcggcggactctattatgagcaaaaccaacctgtcgaatctaggtcttcccacttctcac
actgaccctagcctcgctgatactcaggacaactccctagactcccctacacgagacatt
gggccaagtctgggcatgaaaaagtccagttcgctggagagtttacagaccgcaattcag
gaacttgtatcggaagaggaccacgacgccatggcccggcctcgcgtgaaggcggtgaga
gggagggcttgtaatgagagcttccgtgccgccgttgacaggtcgtacgaagcgccattg
ccagacgtcaagtcaagacctaggatggaaacttccaatcaaaacttgccacgaagctat
tcgatgaaagagagtgccagcgagagcgagagccacagcgggaaggagcaaggttcgtcc
aaccggtcctcgctggtgggggacaacattgtgctggctgagaccagtttcaggaagagt
gggaagaagaagaaggaaggactgttcaagggactagggtccatgttcaggtga
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integrated database retrieval system
