Branchiostoma floridae (Florida lancelet): 118424955
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Entry
118424955 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118424955
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118424955
04091 Lectins [BR:
bfo04091
]
118424955
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118424955
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118424955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
REJ
Kringle
Lectin_C
GPS
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
118424955
NCBI-ProteinID:
XP_035689656
UniProt:
A0A9J7N4Y4
LinkDB
All DBs
Position
10:complement(15523243..15547386)
Genome browser
AA seq
1762 aa
AA seq
DB search
MTKLLFGITALFVGAAVLRLTQSNPCRSVPASVLTCENGAKSNGDTCTVCTRTGGDDPGL
CWDLGQTEHWLTIPPSYLVDWWEQQDSVTSAEGAIDCDFSTWWQSPFTLFPPNNRHWMIL
DLQATHIIYEISIENHGWDLADVGSFILEASMVDPYVWQHVENSDSVRIDTVETQYFGGF
RGTGRYWKITMWTTTGYNIWVHDVCFYGHSVSAKPCPQLNVDCNFDGNPQTVTSETSTGQ
PCHVSVDIHEGARSKDNPLQVPRTGALTLHGLASFSCGGTYQASALWTVPVNDTYTDVLI
DLLHDIEDVQPDRLHLELPAKTMPLGFFQFQLQVIMRAAESSHVSVGVAQTYVGFGPMPI
APTLGNSARTVAGGDFWVNADESWDPDGLIPSSDFNYNWTCEVVYLPDPTPLSCIEVLDN
ILIYAGSRYKVFTPTKSESDASDECRKEGGYLASPNDEGEWAAILLVNNCVAGGQTRTIG
VTDKDGDGQWSLSDGTDVTWSAWAPGYPSAPAADACAQVTSDGWTDDISCSSQNEYICEL
PVSDDCRVDGQTYFGDINYTLEGRDCQTWGTNSPHGENYSPQNSEPDVGNKCRDPGGDGY
NWCYTVDAGKRWEECPIPRCAHKVGLVACGNILGKQMTDADPDGGRLHFEAKSDRQEGAI
VKLSVVIEAEGRPPAFQRFVNIHVGGSDLSLKCRTNCNPENHVISEELSLYYDDATASDW
SLVESPDEFPGLDFGLDVTWANYDKEMTVRPDVFWAAGNYTIRLTDNVDSTRISEWRFRV
PLNPWRSSGDPSTEPCRLIPPVGIAVVDQFCVTCDDYADEYGPVQMEVKYEFIPAGVDTP
TVAYPGDDPPTVIDFILSLYTGWVGYTSLVDIAPGTVIIILRAFAVDGRYTEVELPPIEV
LASSILKSTFQSLRMMSGNSTILPVSAVNRAAGSLFSAVGNVFGASQTMALSEREAGITY
SDVLEASKNATTVGFEALDVLDDIMLNAMMPEFTDPEDKEMFADFYTSQVHIRIQRQNLS
VLEEKVYQVGGASDCLIRVASFPPLIGNKCPRGNTIGVQFYESNFNPFEYSNNSKEIETD
IPGLSVKCADRTLSISNLGEPIDILTRRENKSLDDVVYIFNSAAPLGELSTFLFFAKKNM
SSLGILVEFNSTLYPQPVTMYLSKHVPPTTDDYNWTTTLPVPDGQLFSIKWINNTFLTAD
PYMWHLPEDEISITDGDVVNMTKYYVGVQFGSELDVGSGDVVDFTLSVFETSCVYFAEEP
IHLWQGDGCSAGAMSNMTHMHCRCDHLTKFSGFVAPNPLNIQEALSANVLENPAGLILVL
AVFGSYLFLLLFSRKADRKDLTKAGVGILPGHRLNPRRDCQYLITVYTGFKGNAGTTAEI
SIVLHGFNESSPTITFRDPKRILFEQGSVDSFLVSTEQPLGGLTHMQVWHNNAGYSPAWF
LNQVIVVNRGTNETTYFLANRWLAIDEDDGEIHRIIPTASLEDMTKFRNVFLAKSSRDMN
DGHLWFSVAGRPARSPFTRVQRLSCCLTLLYSTMVTNIMFFGRGDDFDPPEPLRIAGLEI
EPPISLPQLMIGIQSAAIILPVNLLIVFFFRNSGKRPKTNTNSKKADSQSSDDTLDSTRN
MPKSKEALPSLVRNTPSNYCTTNSPSVGLRIRKNSDNAMSNIQQAAEVPHNNSTAKGNEE
KAVPEKKSTLPWWVVYFGWLLVWAASFVAAFFTVLYTLSFGRAKAEAWVFTFVTSFFTDL
FLVQPFKLMLIAMLFALLTRVS
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctgttattcggaataacagcgctgtttgtgggtgctgcagtcctgaggctg
acccagtcgaacccctgccgcagtgtccccgctagcgtcctgacgtgcgagaatggcgcc
aaatccaacggtgacacctgcacagtgtgcacccgcaccggcggcgacgacccgggcctg
tgttgggatcttggtcagacagagcactggctcaccatcccacccagctatctagttgac
tggtgggaacagcaggattccgtcacatccgccgaaggtgccattgactgcgacttcagc
acctggtggcaatcccccttcactctattcccacccaacaacaggcactggatgatcctc
gatctgcaggcgacccacatcatatacgaaatcagcatcgaaaaccatggctgggatctg
gcggatgtcggtagcttcatcctggaggcctccatggtggacccgtacgtgtggcaacac
gtcgagaactcggactcggtccgcattgataccgtcgaaactcaatatttcggggggttc
agaggaacggggcggtattggaagatcactatgtggacaactactggatacaacatttgg
gtccacgatgtttgcttctacggccactcagtctcagccaagccctgtccacagctgaac
gtggactgtaacttcgatgggaacccgcagactgtaaccagtgagacatctactggacag
ccctgtcacgtgtccgtggacattcatgagggagcccgcagtaaggataacccccttcaa
gttccccgcactggtgctctgacccttcatggtttagcgtcattcagctgtggaggcact
tatcaggcctcggcgctgtggacggtacccgtgaacgatacgtacacggatgtactgatt
gatttgctgcatgacattgaagacgtacagcctgaccggctgcacctggaactgcctgcg
aaaaccatgccgctgggattcttccagtttcagcttcaggtgatcatgcgggcagccgag
agctcacacgtaagcgtcggggttgcccagacgtacgtggggttcgggccgatgcccatc
gccccgacgctcggcaactccgccaggactgtcgctggaggcgatttctgggtgaacgcc
gacgaatcgtgggaccctgacggcctcatacccagcagtgacttcaactacaactggaca
tgcgaggttgtatacctgccggacccaacacctctgtcgtgcatcgaagtcctcgacaac
atcttgatctacgctggatcccgttacaaagtcttcacccccacgaaatcagagtcagat
gcgtcggacgagtgcaggaaggaaggcggatacctggcgtccccaaatgatgaaggagag
tgggcagcaatattacttgtcaacaactgcgtcgccggaggtcaaactaggacaattgga
gtcacggataaggatggcgatggacagtggtctctttcggatggcaccgatgtcacgtgg
tctgcctgggcacctgggtacccatcagcccccgcggcggacgcctgcgcacaagtgaca
tccgacggctggactgacgatataagctgcagctcgcagaatgagtacatctgtgagctg
cccgtcagtgatgactgtcgagtggatggacagacctactttggagatataaattatact
ttggagggacgggactgccaaacttggggcactaactccccacatggtgagaactattca
ccccagaactccgagccagacgttggaaacaagtgtagagaccctggaggagacggctac
aactggtgctacactgtggacgcgggaaagagatgggaagaatgtccgataccccgttgt
gcacacaaggtcggtctggtggcctgcggcaacatcctggggaaacagatgaccgacgct
gacccggacggcgggcggttacacttcgaggccaagtctgatcgccaggagggcgccatc
gtcaaactcagcgttgtgatagaggccgaaggacgccctcctgctttccagagattcgtc
aacatccatgtcgggggatccgatctgagcctgaaatgcagaacaaattgtaatccggaa
aaccacgtgatttccgaggagctgagtctctactatgatgacgcgaccgcttcagactgg
tcacttgtcgaatctccggacgagttccccggccttgattttggtcttgacgtgacttgg
gctaattatgacaaggaaatgacagtgcgtcctgacgtattttgggctgctggaaactac
acgatcagactcacagacaatgtcgactccacgagaatctcggaatggagattccgggtg
ccactcaacccctggcggagctccggggacccgtctaccgagccctgccggctcatccct
cctgtcgggatagcagtggtggaccagttctgcgtcacttgtgatgactacgcggatgag
tacggaccagtccagatggaagtgaagtacgagtttatccccgcgggagtggacacgccg
actgtcgcgtatccgggagacgatcccccaacagtgatagactttatcttgtccttgtac
accggctgggtcggatacacgtcactggtcgacatagcaccagggactgtcatcattatc
ctgcgggcgtttgccgttgatggacggtatacagaagtggaactaccgcctatcgaggtc
cttgcctcatccattctgaagtcgacatttcagagcctacggatgatgtccggaaacagc
accatacttcctgttagcgccgtgaacagggctgccggttctctgttttcagcggtgggc
aatgttttcggggcttcccagactatggctttatcggagcgagaggcaggaatcacttac
tccgatgtcttagaagcgagcaagaatgccacgacagtcgggtttgaagctcttgatgtg
cttgatgacatcatgctcaacgccatgatgccggagttcacggatccggaggataaggag
atgtttgcagatttttacacctcgcaggtgcatataaggatacaacggcagaatctaagc
gtcttggaagaaaaggtttaccaggtcgggggagcaagtgactgcctcatccgtgtggcg
tccttccccccactcatcggaaataagtgccctcgaggaaataccattggagtacagttc
tacgagtccaatttcaacccattcgagtactccaacaactccaaagagattgagaccgac
atcccgggactcagcgtgaaatgtgcagaccgaacactttctatttccaacctgggagaa
cccatcgacatcctgacgcgcagagagaacaaaagtctggacgacgtcgtgtacatcttc
aacagtgcagctccacttggggagttatcgacatttctgttcttcgccaagaagaacatg
tcgtctttgggaatcttggtagagtttaacagtaccctctaccctcaacctgtcacaatg
tacctgagcaaacacgtgccgcctacgacagacgactacaactggacaacaacgctgcct
gtcccagacggtcaactcttttcaataaagtggataaacaacacgttcctaactgccgac
ccgtacatgtggcatctaccggaggatgagatttccatcactgacggtgacgttgtgaac
atgaccaagtattacgtcggagttcagtttggctcagagctggatgtgggaagtggagac
gttgtcgactttactctgtccgtatttgagacgtcctgtgtttatttcgcggaggaaccc
atccatctgtggcaaggcgacggctgcagtgccggagcgatgtccaatatgacccacatg
cactgtcgatgcgaccatctgaccaagttctctggcttcgtggcgccaaacccgctcaac
atccaggaagccctgtccgcgaacgtcctggagaacccagccggtctcatcctggtgctg
gcagtgttcgggtcctatctgttcctcctcctgttttcgaggaaggctgatagaaaagac
cttaccaaggccggtgttgggattctgcctggccacagactgaacccccgcagagactgt
cagtatttgatcacagtctacacgggcttcaagggcaatgctgggacaactgcagagatt
tccatcgtgctgcatggctttaacgaaagcagcccgaccatcacgttcagggacccaaaa
aggattctgttcgaacagggcagcgttgattccttcctggtctccacggaacaaccacta
ggggggctgactcacatgcaagtctggcataacaacgccgggtacagcccagcatggttc
cttaaccaagtgattgtcgtcaacagaggaaccaacgaaacaacctacttcttggcaaac
agatggcttgccatcgatgaagatgacggtgagatccaccgcatcattcccacagcgtca
ctggaggacatgacgaagtttcgaaacgtttttcttgccaaaagctccagggacatgaac
gatggtcacctgtggttctccgttgccggccgccctgcccggagcccgttcactcgtgtt
cagcgcctgtcctgctgcctgacgctgctctacagcaccatggtcaccaacatcatgttc
tttggtcgcggggacgacttcgaccctccagaaccactcaggattgctggtttggagatt
gaacctccgatttctctacctcagctaatgattggcatacagagcgcggctatcatcctt
ccagtcaaccttctcatcgtcttcttttttcgcaactcggggaagcgaccaaaaacaaac
accaacagtaagaaggcagattcccaatcaagtgacgatacccttgattccacgaggaat
atgccaaagagcaaagaagctcttccatcccttgttcgaaacacaccctccaattattgt
acaaccaacagtccatccgttggtttgaggatcaggaaaaacagcgacaatgccatgagt
aacattcaacaggcagcagaggttccgcacaataacagcacggctaaaggtaacgaagag
aaagccgtgcccgagaagaagtcgacactaccctggtgggttgtgtattttggttggctt
cttgtgtgggctgctagttttgtggctgccttcttcacagttctctacacgttgagtttt
ggcagggcgaaggcagaagcctgggttttcaccttcgtgacgtcatttttcaccgacctg
ttcctggtgcaacccttcaagctgatgctgatcgcgatgctgtttgccctgttgacgagg
gtaagctaa
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integrated database retrieval system
