Branchiostoma floridae (Florida lancelet): 118424998
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Entry
118424998 CDS
T01074
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118424998
04091 Lectins [BR:
bfo04091
]
118424998
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118424998
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118424998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
REJ
Ion_trans
GPS
Motif
Other DBs
NCBI-GeneID:
118424998
NCBI-ProteinID:
XP_035689706
UniProt:
A0A9J7N2X2
LinkDB
All DBs
Position
10:17587787..17609477
Genome browser
AA seq
2035 aa
AA seq
DB search
MKVSVRWTVRQSDTQVLSLEALPDDVITDKLRLSLQPKTLPLGLFMVQVTVTMEVPEVGH
TSIGVAQTWLEVIPFPIVARVSGFAARTRPLGHVFVLAALSYHPDCRVPSDQLSYNWTCE
AVSYPNPPVTSPGISSCEALLGLGAFSDPDGGVLHFDTSTKPVPLDSVVKVRLTIAADGH
DPGHTYIDIHTNGDPSLGQYRLINPSRNNPGDFIAHEMLHLTMGPGVDYSGPNLWSLVEA
PADFPGLDWNNDVLLVTEDTLKVRPNVFTVPGYYTVRATNYLNPAYPRIGEYRFLVIRNP
VPLRLLQDNPAEIPPDVCSVRPADGVSLVDKFCIVCEDFYDEVGPLKMDVKYKVEPGGIE
AATVKFPGESRAAPTDIVLNVFSGWVFYTPMLDIAPGNITVEVLISSADGRSTTIQLDPF
FIANPAIEDLIAYTEEFFDSQVGPFYSLLSMRSSAETFSGAVAAASVIAALGGNGDDITE
ATDMVAANMANVELQDYDGVTGLATTIMLVTAYPEFVSGNAQVHSSMSLKHAFGKLRDLS
VNNSLPVEEVNIATAYIFTGATHVFKASEVKALSEQEDGVGFSDMLEKNKEATTTTFQAL
DVLDDIYLINMMPAYDNDDLFADIYTSKVHLRIKREDPADSSEQLYTVAGASDSFVRVPS
FSSLAGDGCLGGETAGVQFLESNFNPFEYSNNSRLVASDVVGLAVKCGNLTLPVSGLSEP
IDILTRRENKSLEELMYIFTSSSRLGDISTFHFYARTNMSAMSFSLDFNSSLFPHDVTLW
LNKHEPPTPDTYDWTATLPVPEEQLFTVPWMNGSSLASSAYQWLLPEDEIDITDLDVDVY
NRTDYFIGVRFGSEVDRASGEIVPFTLYAFETSCVYFQEDVTHLWQSDGCRVGPMSNITH
IHCQCDHLTKFAGFVPPNPLNIREAFSANILENPTGLILVLAVFTSYVMGVIWARKADRK
DIAKAGVGLLPGHKLNPRKDCQYLITVYTGFRVNAGTTAEITLVLYGSQHESPPLTLRDD
SRCLFEQGSVDSFLVSTEEPLGVLTHTRVWHNNAGFSPSWYLSQIVVANRETKVTTYFLS
NRWFAIDEGDGKIDRIIPTSVEKDITKFHNLFLAKSSRDMNDGHLWFSVAGRPARSPFTR
VQRLSCCLTLLYSTMLTNIMFFGRGDDFDPPEPLRFAGLKINPPISLPQLMIGIQSAAII
LPVNLLIAFLFRNSRSGAQKKSTRKKLKPGSGVQPAKSEPGRHRGPKKEETFISDNPDTP
SVWYPRGRPVPIQKLRVVQSSLDVDVKESCKTHDNAAHGQKWSLPWWGVFIGWLLVWSAS
FVAAFFTVLYTLSFGKAKAEAWACTFVTSFVTDLFLVQPVKLVLVAVIFALYTKKPVEDK
DPPPTPTGNDEEYVIYNENDSPTKEKSGTSATSWMRYFAINRAADYGTNPKFPAEERSTS
PPDEDVLAEARARSAEKRKRRAAVLEVLVFGLFVTVIMLTAYQERSPLAFYMTQNVKEQI
MGEGFSDVNDIESFWSWVEDELIPTTRSAEWYNGRTLAADTVLQDMLTHPLDSVQLRQLR
LKQGQLCETPKRLQHITPLCTVGFSKLTEDIDDYTQGWIRENETFDTTDPVLCTPTSPTP
TSTVDTPVTGADCVSSLLTAEELKTPWKYNHDASLINSFPYFGQHGTYHAGGYNVPLGKT
RASGLRVATFLQQRGWLDERTRAVIVELILYNPHANLFSMVTLVVEFTNLGAAYRGAEVV
TLRLMQQEAILLLALRAVLAVFILVFVIKEAERLFSRPMEYLKDFWTWVELLVIVIGVAT
LGVYFNAQSIIDRAAEQWVSSGSVLDLYKSAVNWFQVYTYLLAFLICCGTLKFIRLLRFN
SHVYALTMTIRKSSRPVLLFTIIAGIILMAFTQMGNLLFGIKLQDYKNILTSLTSLCTMM
LGVFDFDALVDGHWVLGPLMFFSYQVMMQFILLSMFMAILMDVYAEESQDPNTDDLKMVA
FIRETTSEAVGKANRSLSTVGKNNSKKTRQAYRPDLDHRRKFATVLKELDEVSKI
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatcggtgcggtggactgtgaggcaaagcgacacccaggtgttgagtcttgag
gccctgccggatgacgtcatcaccgacaagttgagactctccctgcagccgaaaacctta
cctctcggtctcttcatggtgcaggtcacagtgaccatggaagtacccgaggtcggacat
accagcatcggtgtggcgcagacgtggctggaggtgataccgttccccattgtggcgaga
gtttccggctttgccgcgagaacccgaccgctagggcatgtctttgtccttgccgcgctg
tcttaccaccctgactgtcgggtccccagcgaccagctaagctacaactggacttgtgaa
gcagtcagttacccgaacccaccagttaccagccctggaatatcgtcttgtgaggctctt
cttggattaggggctttttcggatccagacggaggagtcttgcacttcgacaccagcacg
aagcctgtcccgctggattctgtggtcaaagtacgactgaccatcgccgctgacgggcac
gaccctggtcatacctacatcgacatacacactaacggagacccaagcctcggacaatac
agactaatcaacccatcacgcaacaaccctggagacttcatcgcccacgagatgctgcac
ctcaccatgggaccaggcgtggattattccggccctaacctgtggagtcttgtggaggcc
ccagcggactttcctggcctcgactggaataacgacgtcttgcttgttactgaagatacc
ctcaaagttcgtcccaacgtttttacagtccccggatattacacggtcagagctaccaac
tacctgaaccccgcctatccacggataggagaatatcggtttctcgtcatcaggaatccg
gtaccactgaggcttctccaggacaaccccgcagaaatcccaccagacgtgtgctctgtc
cgccctgcagacggagtatcattagtggacaagttctgcatcgtctgcgaagacttttat
gatgaggttggcccgcttaaaatggatgtgaagtacaaggtcgaaccgggaggcattgaa
gcggcaacagtgaagtttcccggggagagccgagctgctcccactgacatcgttctgaac
gtgttttctggctgggttttctacacacccatgttggacatcgccccaggtaacatcaca
gtagaggtgttgatatccagcgccgacggacgtagcactaccattcaactggacccgttt
tttatagcaaaccctgccatagaagatttgattgcgtacacggaagagttcttcgacagt
caagtaggacctttctacagtctactgtccatgaggtcttctgcggaaacgttcagtggt
gcagtggcggctgctagtgtaatagctgccctgggcggcaatggagacgacatcactgag
gctacagacatggtggctgcgaacatggcaaacgtagagcttcaggactatgacggagtt
acaggactggcaaccaccatcatgctagtcaccgcatatcccgagttcgtctccggtaat
gcacaagtccatagttccatgtctctgaagcacgcgttcgggaagttaagagacttgtct
gtaaataacagcctacccgtggaggaggtgaacatcgcgacggcatacatctttacaggc
gctacccatgtgttcaaagcctctgaggtaaaggctttgtcggagcaagaggatggggtg
ggcttctccgacatgctggaaaagaacaaagaggccacgacaacaaccttccaagcctta
gacgtgcttgacgacatctatctgatcaacatgatgcccgcctacgataacgatgatcta
tttgcagatatttatacatctaaggtccacttgagaattaagcgagaagaccccgctgac
tcctctgagcagctgtacacagtggcgggtgcgagtgactcgtttgtccgcgtgccgtcc
ttctcatcgctggctggagacggttgtctgggaggagagacggctggagtacagtttctg
gagtcaaatttcaacccgttcgaatattcaaacaattcgcggttagtcgcatcagatgta
gtcggcctggcggtgaaatgtggtaacttgacacttcctgtctctggcctgagcgagccg
atagacatcctgacgcgaagggagaacaaaagcctggaggagttgatgtatatctttact
tcatcttcaaggcttggtgacatatcgacttttcatttttatgctaggacaaatatgtcg
gcgatgagcttcagcctggatttcaacagctccctcttcccccatgacgtcaccctgtgg
ctgaacaaacacgagccaccaacaccagacacgtacgactggacagccaccctgccggtt
ccggaggaacagctcttcacagtcccgtggatgaacggatcatccctggcatccagcgct
taccagtggctgctgccagaagacgagattgacatcacagacctcgatgtagacgtatac
aacaggacagattattttatcggagtccggttcgggtctgaagttgatcgtgccagcgga
gaaatcgtccccttcactctgtacgcctttgagacgtcctgtgtctactttcaagaagac
gtaacccacctgtggcaaagtgacggctgtagggtcggtccgatgtctaacataacccac
atccactgccagtgtgatcacctgaccaagtttgctggtttcgtgccgccgaatccactc
aacatccgggaggccttctcagcaaacatcttggagaatccgactggcctcattctggtt
ctcgccgtgttcacttcttacgtcatgggcgttatctgggccaggaaagccgacagaaaa
gacatcgctaaggctggagtgggactactgcctggtcacaagctgaaccctcgtaaggac
tgtcagtacctcatcacggtgtacactgggttccgggtcaacgcaggaactaccgctgag
atcacgctggtgctctacggcagccagcacgagagccctccccttacgctgagggacgac
agccgatgtttgttcgaacagggcagcgtggactccttcctggtgtccacggaagagccg
ctaggggtcctcacccacacgagggtgtggcacaacaacgctgggtttagtccatcatgg
tacctgagtcagattgttgtagccaacagggaaacgaaagtcacgacgtatttcctaagt
aacaggtggttcgctattgatgagggtgacggaaagatcgatcgtatcatcccgacatca
gtggagaaggatattactaagttccacaacttgttccttgcaaaaagctcgagggacatg
aacgatggccacctgtggttctccgttgccggccgccctgcccggagcccgttcacccgt
gtccagcgcctgtcctgctgcctgacgctgctctacagcaccatgctcaccaacatcatg
ttcttcggccgcggggacgacttcgaccctcccgagccgctcagattcgctggtctaaag
ataaacccgccgatttcacttccgcagctgatgatcggcatacagagtgcagccatcatc
cttccagtcaacctcctcatcgccttcctcttccgcaattcgcggtcgggagcacaaaaa
aagagcaccagaaagaagttaaagccaggcagcggagtccagccagccaagtcggagcca
ggcagacacaggggacctaagaaggaagaaacgtttatctctgacaacccagacacgccg
tcagtttggtacccaagaggccgacccgtccccatccagaagctcagagtggtacagtcc
tcattggatgttgatgtaaaagaaagttgcaagacgcatgacaacgctgctcatggacag
aagtggtctctaccctggtggggtgtgtttataggatggttgcttgtgtggtccgctagt
ttcgtagcggccttcttcacagttctgtacaccttgagtttcgggaaagcgaaggcggag
gcctgggcttgcaccttcgtgacgtcattcgtcactgacctgttcctggtgcagcccgtc
aagctggttctggtggcggtaatctttgcgttatacaccaagaaacctgtggaggataag
gatccacctcccacgccaacaggaaatgatgaggaatacgtcatatacaatgagaatgac
tcacctacaaaggaaaagtcaggaaccagtgccaccagctggatgcgatactttgccatc
aaccgtgcagctgactatggcaccaacccaaagtttccagctgaggaaaggtccacatca
ccaccagatgaagacgtcttggccgaagccagagccaggagcgcagagaaacgcaaacgc
cgtgcggctgtgctggaggtgctcgtgttcgggctgttcgtgacggtgatcatgctcacg
gcgtaccaagaacggagcccgctggccttctacatgacgcagaacgtcaaggaacagatc
atgggagaagggttctctgatgtcaacgacatcgaatccttctggagttgggttgaagat
gagctgattccgaccacacgttcagcagagtggtacaacgggcgcaccctggcggcagac
acggtactgcaggacatgttaactcatccactggactcggtacagctgaggcagctgcgg
ctgaaacaggggcaactctgtgaaacaccaaagagactgcagcatataacaccattatgc
accgtgggcttctctaaactaacggaagatattgacgattacacccagggctggattcgt
gaaaacgagaccttcgacactacagacccggtactatgcacgcccacatcccccacccct
accagtacagtggacacgccggtcacaggagcggactgtgtgagcagtctactgacagca
gaggaattgaaaacgccctggaagtacaatcatgatgcttctcttattaacagcttccca
tatttcggccagcacggcacatatcacgcaggtggttacaacgttccgctgggaaagact
cgtgcgtcgggtctccgggtggcgacattcctacagcagcgcggctggctggatgagaga
acgcgtgccgtgatcgtggagctgattctgtacaacccacacgccaacctgttctccatg
gtgacgctagtggtggagtttaccaacctgggagctgcctacaggggagcagaggtggta
accttgaggctgatgcaacaagaggccatcttactcctggctttgcgagctgtcttggca
gtcttcattcttgtatttgttattaaagaagccgagaggcttttctcccgtccgatggaa
tacctgaaggatttctggacctgggtggaacttcttgtaatcgtcatcggcgtcgcgacc
cttggtgtctacttcaacgctcagagcatcatcgacagagctgccgaacagtgggtatct
tcaggctccgttctggatctctacaaaagcgccgtcaactggtttcaggtttacacctac
ctgctcgcgtttctcatctgttgtggcacgttgaagtttatacggctcctgcggttcaac
tcacacgtttacgccctcaccatgaccatcagaaagtcctccagacccgttctactattt
accatcatcgctggcatcattctcatggccttcactcagatgggaaatcttctgttcggc
atcaaactccaggattacaagaacatcctgaccagtctgaccagcctgtgtaccatgatg
ttgggtgtttttgatttcgatgctctggtggatggtcactgggttctcggtcctttgatg
ttcttctcctaccaggtcatgatgcagttcatattactgagcatgttcatggctatcctc
atggatgtgtacgcagaggaaagtcaggatccgaacactgatgatttaaagatggtagct
tttatcagagaaaccacttcagaggctgttggaaaagcaaatcgttccctgtcaacagta
gggaagaacaacagcaagaaaacacggcaggcttatagacccgatttggaccatcgccga
aagtttgcgactgtacttaaagaacttgacgaggtttctaaaatttga
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integrated database retrieval system
