Branchiostoma floridae (Florida lancelet): 118424999
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Entry
118424999 CDS
T01074
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118424999
04091 Lectins [BR:
bfo04091
]
118424999
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118424999
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118424999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
GPS
REJ
Motif
Other DBs
NCBI-GeneID:
118424999
NCBI-ProteinID:
XP_035689707
UniProt:
A0A9J7LUT0
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Position
10:17629724..17647203
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AA seq
1308 aa
AA seq
DB search
MKLSYASVQWTVRQSDTQVLSLEVLPDDVIADKLRLDLPPDTLPAGLFMVQVTVTMEVPE
VGHTSIGVAQTWLEVFPFPIVVTLNGNAARTKPLGHVFVTAWLAHDSRCRIPSDQLSYNW
TCEAVSYPNPPVTSDGIPACEALLGTLEADSNPDRGTLHFDTSLKPVPLDSVVKVRLVVA
AEGHEPGHTYIDIHTNGDPSLGEYRIVCSFNCNPGDLIAHEMLYLIIPWSVDNSGPNSWT
FVEAPADFPGIDWTNDILLVNDDNLKVRPNVFTVPGYYTVRATNYLNENFPRIGEYRFLV
IRNPVPARLLQDNPAEIPPDVCSVRPVEGVSLVDKFCIVCEDFYDEVGPLKVDFKYKVEP
GGVDLATVRFPGESQAAAADIVVNLFSGWVFYTPMIDLAPGSIIVEVLVSSADGRFSTVQ
LDPVFVDSPSKDALIAFTETFFDSRVGPFFNLMSMRSSVETFSSAVTAASVVATLANNGI
DISQATDMVADGMAKVELQDYDGIIGLASCILLVTVFPQYVSGNAQVHSSMSLKHAFEKL
GEMSENNNMDVEEVNMATALLFTGTAHVLKASEVKALSEHEDGVGFSNMLEKNKEATTRT
FQALDVLDDIYLINMMPAYDDDNLFADIFTSKIHVKIKREDPADSSEELYTVAGVSDSFV
RVPSFSSLAGDGCLGGKTVGVQFLESNFNPFEYSNNSRLVESDVVGLAVKCDNSTLPVSG
LSEPIDILARRENKSLDELMYIFTSSSRLGDISLFHIYARRNMSAMGFSLDYNITLFPHD
VTLWLRKHQPPTPDTYGWTATLPVPENQLFTVPWINETSLLSSAYQWLLLEDEIAITDLD
VDKYNRTDYFIGLRFGSEVDRARGETVPFTLYVFETSCVYFQEDETHLWQSDGCRVGPMS
NITHIHCRCDHLTKFAGFVPPNPLNIREAFSANILENPTGLILVLAVFTSYVMGVIWARK
ADRKDIAKAGVGLLPGHVLNPRKDCQYLITVYTGFRGNAGTTAEITLVLYGSQYESPPLT
LRDDSRCLFEQGSVDSFLVSTEEPLGVLTHMRVWHNNAGFSPSWYLSQIVVANRATKVTT
YFLSNRWFAIDEGDGKIDRIIPTSVEKDITKFHNLFLAKSSREMNDDHLWYSVAGRPARS
PFTRVQRLSCCLTLLYSTMLTNIMFFGRGDDFDPPEPLRFAGLKINPPISLPQLMIGIQS
AVIILPVNLLIVFLFRNSGTQKRSSGKKLNSEPDRHKRPKKEETFTSDNPDTPSVWYPRG
RPVPIQKLRVVQSSLDVRESSKTHDEFKDNAVRGQKSLPWWGVFIGEL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttcatacgcgtctgtacagtggactgtgaggcagagcgacacgcaggtgttg
agtctggaggtcctgcctgatgacgtcatcgccgacaagttgcggctggacctgccgccg
gataccctccctgccgggctgttcatggtgcaggttacagtgaccatggaagtacccgag
gttggacacaccagcatcggtgtggcgcagacgtggctggaggtgttcccgttccccatt
gttgtgacacttaacggcaatgccgcgaggaccaaaccgctggggcatgtttttgttact
gcctggttggctcatgactctcgttgccggattcctagcgaccagctaagctacaactgg
acatgtgaagcagtcagttatccgaacccaccagttaccagcgacggaataccggcttgc
gaagctcttcttggaaccctagaggctgactcgaatccagataggggtaccttacacttc
gacaccagccttaagcctgtcccactggattccgttgttaaagtccgtttagtcgtcgcc
gctgaggggcatgaacctggtcatacctacatcgacatacacaccaacggagacccaagc
ctcggagagtacagaatagtatgttcatttaactgtaaccccggagacctaatcgcccac
gagatgctatacctcatcataccatggagcgtagataattctggtcctaactcgtggact
tttgtggaggctccagcagactttcctggcatcgactggacaaacgacatcttacttgtc
aatgacgacaacctaaaagttcgtcccaacgtttttacagtccccggatactacacggtc
agagctaccaactaccttaacgaaaacttcccacggattggagaatatcggtttctcgtc
atcaggaatccggtaccagcgaggcttctccaggacaaccccgcagaaatcccaccagac
gtgtgctctgtccgccctgtagaaggagtatcattggtggacaagttctgcatcgtctgt
gaagacttttatgatgaggttggcccgcttaaagtggacttcaagtacaaggtcgaaccg
ggaggtgttgatttggcaacagtcaggtttcccggagagagccaagctgctgccgctgac
atcgtggtgaacctattttccggttgggttttctacacacccatgatcgacctcgctcca
ggtagcatcatagtagaggtgctggtatccagcgctgacggacgcttctctactgttcaa
ctggacccggtttttgtcgattccccttccaaagatgctttgatcgcattcacggaaacg
ttcttcgacagtcgagtaggacctttcttcaatctaatgtccatgaggtcttctgtggaa
acgttcagcagcgcagtgacagctgctagtgttgtagctaccctggctaacaatgggata
gacatcagtcaggctacagacatggtggctgatggtatggcaaaagtagagctacaggac
tacgatgggatcataggattggcaagctgtatcttgctagtgaccgtatttccccagtat
gtgtctggcaatgcacaagtccatagctccatgtctctgaagcatgcgtttgagaagcta
ggagagatgtcagaaaataacaacatggacgtagaagaggtgaacatggcgacggcactc
ttatttacaggcactgcccacgtgctcaaagcttctgaggtcaaggctttatcggagcac
gaggatggggtgggcttctccaacatgctggaaaagaacaaagaggccacgacaagaacg
ttccaagccttagacgtgctagacgacatctatctcatcaacatgatgccagcctacgat
gacgataatctttttgcagatatctttacatccaagatccacgtgaagattaagcgagaa
gaccccgctgactcctctgaggagctgtacactgtggcgggtgtgagtgactcgtttgtc
cgcgtgccgtccttctcatcgctggctggagacggttgtctgggaggaaagacggttgga
gtgcagttcctggagtcaaatttcaacccgttcgaatattcaaacaactcgcggttagtc
gaatcagatgtagtcggcctggcggtgaaatgtgacaactcgacacttcctgtctcaggc
ctgagcgagccgatagacatcctggcaagaagggagaacaagagtctggatgagctgatg
tacatcttcacgtcatcttcaagacttggcgacatatcgctttttcatatctacgccagg
agaaatatgtcagcgatgggcttcagcctggactacaacatcaccctgttcccccatgac
gtcaccctgtggctgcgcaaacaccagccaccaaccccagacacgtacggctggacagcc
accctgccggttccagaaaaccagctcttcaccgtcccgtggataaacgaaacgtccctg
ctgtccagcgcttaccagtggctgctgctagaagacgagatcgccatcacagacctggat
gtggacaagtacaacaggacagactactttataggacttcggttcggctccgaagttgat
cgcgccagaggagagaccgtccccttcactctgtacgtctttgagacgtcctgtgtctac
tttcaagaagacgaaacacacctgtggcaaagtgacggctgtagggtcggtccgatgtct
aacataacccacatccactgccggtgtgatcacctgaccaaatttgctggtttcgtaccg
ccaaatccactcaacatccgggaagccttctcagcaaacatcttggagaatccgacgggc
ctcattctggttctcgccgtgttcacttcttacgtcatgggggttatctgggccagaaaa
gccgacagaaaagatatcgctaaggctggagtgggactacttcctggccacgtgctgaac
cctcggaaggactgtcagtacctcatcacggtgtacactgggttcaggggcaacgcggga
actaccgctgagatcacgctggtgctgtacggcagccagtacgagagccctccccttacg
ctgagggacgacagtcgatgtttgttcgaacagggcagcgtggattctttcttggtgtcc
acggaagagccgctaggggtcctcacccacatgagggtgtggcataacaacgcagggttt
agtccatcatggtacctgagtcagatcgttgtagccaacagggcaacaaaagtcacgacg
tatttcctgagtaacaggtggttcgctattgatgagggtgacggaaagattgaccgtatc
atcccgacatcagtggagaaggatattactaagttccacaacttgttccttgcgaaaagc
tcgagggaaatgaacgatgaccacctgtggtactccgttgccggccgccctgcccggagc
ccgttcacccgtgtccagcgcctgtcctgttgcctgacgctgctctacagcaccatgctc
accaacatcatgttcttcggccgcggagacgacttcgaccctcccgagccgctcagattc
gctggtctgaagataaacccgccgatttcacttccgcagttgatgatcggcatacagagt
gcagtcatcatccttccagtcaacctcctcatcgtctttctcttccggaattcgggaaca
caaaaaaggagcagcggcaagaagttgaactcggagccagacagacacaagaggcctaag
aaggaagaaacgtttacctctgacaacccagacacgccgtcagtttggtacccacgaggc
cgacccgtccccatccagaagctcagagtggtacagtcgtcattggatgtcagagaaagt
tctaagacgcatgacgaattcaaagacaacgctgttcgtggacagaagtctctaccctgg
tggggtgtgttcataggtgagctgtag
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