Branchiostoma floridae (Florida lancelet): 118425283
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Entry
118425283 CDS
T01074
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118425283
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118425283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
DUF6368
Motif
Other DBs
NCBI-GeneID:
118425283
NCBI-ProteinID:
XP_035689974
UniProt:
A0A9J7N509
LinkDB
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Position
11:6010425..6062358
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AA seq
2155 aa
AA seq
DB search
MSATNSVPNGCSLEDCHSNVFALTDLTGIKWRRLRAPCPAGVGPLEDPILSSFAKCLAAD
VFCVWRRLSPSTAPKFPGDSFQGEPSTPTPKQERELWIFWYGDDPDLTDVLHPELKDIEQ
GSWEKELSYECRTLLFKALHNLLERYLLSADFVRLGRWFVRPYIQGTDKNDKCEYLSCAF
SFFLHGESTVCTSVEIQEHQLVERLSMQHFNSVQGTAGGFHVLLSPYGLHATLTGRTYKA
SDPTTQRLLDEWKHFYPLSDQASADVGAAGDASSTLPVAVEVVVGGVRMCYPTEYVVVPM
VHCEEGTQTTSGGGSLSAVQPAMGKASAPMSTLSSMSLTPPTSPLNQSVLPSGTRTGNPA
CPANPAEDELGFRDVSPERLARKVATQVWQDSCVTIGVKRPHPDATNNAGDDGIATDLGN
WDFIDPTQKVDCKCSRQKVKLRSSGHGSSRPAPSSSSGLSKHTYSAWTSLGGTSSKHKQS
DKSEKQEKQQQPRVRPLTPFHHRAPTPSVDSYMGVDQENFTNQRLGLGMGPLAGGGGQGV
DNKRFLPTPGSVESSHSAAPSPLVAPSGTASSSLPGERTMPTLSPHPIIKKENDMGPPTV
TSQRECSLPFANNTAVVTEVQRRLDKKAANEYKGLPPESEKEDGRWKCYKLPKVNTGKEF
HRPALAPTVFDTAGFENEEEGTSGQLPDLTVRPALGVLERPLKKMKTNFSFRPIHPAMDT
IHSDSSSRSLMARTSPGIDPYEFMEDSSPPSLMPTGFPPRGKSSKKGRLQSLSSQSDRNS
TDSQSNKGAEGQNQAGTAKGEASAKSGEKEPKLSSPQPAVKVVSSTSLTTEADLAVTFSD
LDQLFESSDSDNDDGGPSASGGAKSASAASTEDTAQTHLHKSSGGTGNIADLQNLQTMFP
TPPSVNPSLSPCNAGNQEYTSPDSVPGITKADGHAATALADYPEVEVDESMGSPVPEQIK
DWSYVYRKANTHLHCGSSMYAPLKSLPSHKLPPIRLKDNMLYKPSWQMPVKDYPTVTAGG
FMDLMPLPQDMINSTCPITMTTVTASNSVPMASPAFASVKTPRSAGGPGPYDSPPSTVSS
FRNVNSVDMNSVGPTMEAHSLTVNMLLSDSAINLFKDRNFDSCVICVCNVNIKGADVEVY
LPEFHAQNQEAQYKCTCGFSAVMNRKYARKAGLFPEDLCEIFGFKNVKRLKDNVSEVNRT
SREGDSAQSGKTDEKATLNMKLAGNNRISKALLQVVQDQCSSLYSTPHSLDRIVANRRPS
VVSQKIEVTICDDCDACHWALEQGRSHDGSPVKLEQADKAVCQHTWPPPKAVDQSSLSSR
DVVRMLQSLQPLLQDAIQKKRTTRLWEPKPTVQGPLTWSQFHRLVGRGGDENSSEPLPVP
SLLVGYEKDWLSLSPFALNHWEKLLLEPFGTSRDVVYVVICPDNDTILSNAKAFFRELST
VYESCRLGRHRPITTVLRDGIRRVGKVAAERLADKPVDEWFNKLDAVPVGKKLKLYAQVC
KHDLAAHLATVTLDTSLLKALPTPGKNSVTSNSSNSTTGTSSSGNTDKPPSVPPPPSSGD
GKEGESPKDPNNTGGESSEGGQNKENKDGSPDEVDEEAQPLAVVVYIVDPFSMGPENGHL
TDVYALGLLKCYTEILQADLPDNVRNNISLQIIPVQQLVQPQKAEERATYLQHLKTLAFS
VFTQSHRTLQFTIHAKSVTGFGPSAQNEAILKSKETDVLHLYTPPYILAPQKDKQTELVE
SFGELTPKSGVLFCAYCLSSDQRWILATVTDLRGELLDTVVISVEAPISPKPRKVSACRM
GLQKLWEFVLSVIATTTFPWRIVIGKLGRIGHGELKDWSSLLSRQRILKSSRNLKEVCRM
CSMSPQCECPTILSACMVSLEPESALRIFHESVMSGSAPGARPGGLLGSQLSTPRDASCT
HLMAFPTSATTQAAAANFSITETMDLGFAGNTGDMLGDDDLLPVLQEDLGDSDLNQFLGL
AASPTALTSPVHSPQSPTGGGFSGGGQSNPYSGGGDGSGKTSSSQPLPDPDEIPMLLQQP
LALGYFISTAPIGDMPKSFWSACPHAEGVCPVYLKSALHVHTPAVQQNSEEILQSRHSHP
LDSNLTCDVLRYVLESYNALSWLTYDPVRRDRRSCLPVHMVVLTKLYNTMATLLT
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctacaaactccgtgccgaacggttgtagtctggaggattgccattcaaatgtg
tttgctctgactgacctgacaggtatcaaatggcgtaggctacgcgccccgtgccctgcg
ggtgtggggcccctggaggaccccatcctctcctccttcgccaagtgtctcgccgccgac
gtcttctgcgtgtggcgccgtctcagccccagcaccgccccgaagttcccgggagacagc
ttccagggcgaaccatcgaccccaaccccgaaacaagagcgggagctgtggatattctgg
tacggggacgatcccgacttaacggacgtgttacaccccgagctgaaagatattgagcag
gggtcctgggaaaaggagttatcctacgagtgtcggaccttacttttcaaagccttgcac
aacctcttggagagatacttgctgtctgcggactttgtacgattggggaggtggttcgtg
cgaccgtacattcaaggcactgacaagaatgacaaatgtgagtacctgtcgtgcgccttc
tcgttcttcctgcacggtgagagcacagtatgcaccagtgtggagatccaggagcaccag
ttggtggagcgtctgtccatgcagcactttaacagcgtgcagggcaccgcaggcggcttc
catgtcctactcagtccatatggcctgcacgccacgctgactgggcgcacctacaaggcc
agcgaccccaccacacagaggcttctggacgaatggaagcacttctaccccctgagcgac
caggcgtccgcagatgtgggagccgcaggcgacgccagcagcacactgccggtggctgtg
gaggtcgtcgtaggtggtgtgcggatgtgctaccctactgagtacgtggttgtgcccatg
gtgcactgtgaggaagggacccagacaacaagtggaggtggcagcctatctgcagtacag
cctgcgatggggaaggcctcggctccgatgtccacgctatcgtccatgtcgctcaccccg
ccgacctccccgctcaaccagagcgtgcttccgtccggcaccaggaccgggaacccggcc
tgtcccgccaaccccgcggaggacgagctggggttccgcgacgtgtcgcccgagaggctg
gcgaggaaagtggcgacacaggtgtggcaggacagctgtgtcacaataggtgtcaaacga
ccacaccctgatgccacaaataacgcaggggatgatgggatagcgacggacctcggaaac
tgggacttcatcgaccctacacagaaggtggactgcaaatgttcaagacaaaaggtgaag
ttgcggtcctcaggccacggatcgagccggccagcccccagctcctcctcaggcctatcc
aagcacacgtacagcgcctggaccagtctggggggaacctcctccaagcacaagcagagt
gacaagtcggagaaacaggagaaacagcagcagccacgcgtgcggcccctcacaccattc
caccaccgggcgccgaccccctccgtcgactcctacatgggtgtggaccaggagaacttc
accaatcagagactgggactggggatgggaccactggcgggcgggggtggacagggcgtc
gataacaagcgtttcctgccgactcctggttcggtggagtcgtctcactctgcggcaccc
tccccgctcgtggcgccatcggggacggcgtccagttcgctgccgggagaaagaacaatg
ccgacgttaagccctcatccgattataaagaaggaaaacgacatggggccccctactgtc
acctcccagagggaatgtagcctcccgttcgcgaacaacactgcggtggtaacggaggtt
cagagaagactggacaagaaagcagctaacgagtacaagggtttgcctccggagagtgaa
aaggaggacggaagatggaaatgctacaaacttcccaaagtgaacacaggaaaggaattt
cacagaccggcgctcgctccgacggtgtttgacaccgcggggtttgaaaacgaggaggaa
ggaacttcaggacaactaccagacttgacagttaggccagcacttggtgtacttgagagg
cctctgaagaagatgaagacaaatttctcgttccgcccgatccacccggccatggacacc
atccacagcgactcctcctccaggagtctcatggccaggacgtctcccgggatcgaccct
tacgagttcatggaggactcctcacctcctagccttatgccaacagggtttcctcctcga
gggaagtccagtaagaagggtcggctgcagtctctgtcatcccagtctgacaggaacagc
actgactcccagtctaacaagggtgctgagggacagaaccaggctggcacagccaagggg
gaggcctcagccaagtctggggagaaggaacccaagttgtcatcaccccagccagcagtg
aaggttgtgtcctctaccagcctgaccacagaggccgacctggctgtgaccttcagcgac
cttgaccaacttttcgaatcatctgactcagacaatgatgatgggggtccgtctgcatca
ggtggtgcgaaaagtgcaagtgccgcctcgacagaagacactgcccaaacacatctgcac
aagagcagtggcggaacagggaacatcgctgatcttcaaaaccttcagacaatgttcccc
acaccgccgtccgtcaacccttccctgtcgccatgcaacgcggggaaccaggagtacacc
agcccggactccgtacccgggatcaccaaggcagacgggcacgcagccaccgcgctggca
gactaccccgaggtggaggtggacgagagcatgggcagtcctgtccccgagcagatcaag
gactggtcgtacgtgtacaggaaagccaacacacatctacactgtgggtcctccatgtac
gcaccactcaagtcactgcccagtcacaagttgccacccatccgactcaaggacaacatg
ctgtataaaccatcatggcagatgcctgtgaaggactatcccactgtgaccgcagggggg
ttcatggacctcatgcccctcccacaagacatgatcaactccacctgtcctattaccatg
acgactgtcaccgctagcaacagcgtccccatggcttctcccgccttcgcctcagtgaag
acgccgcgcagcgcaggggggcccggaccgtacgattccccgccttcaacggtgtcctcc
ttccggaacgtgaattccgtggatatgaacagcgtgggaccgaccatggaggcccacagc
ctcactgtcaatatgcttctctcggattccgcgatcaatctgttcaaggacaggaacttc
gacagctgcgtgatctgtgtttgtaacgtgaacatcaagggcgcagacgtggaagtttac
ctcccggagttccacgctcagaaccaggaggctcagtacaagtgcacatgtggcttcagc
gccgtcatgaaccgcaagtacgcgcggaaggcagggttgttcccggaggatctctgcgag
attttcggcttcaagaacgtgaagagactaaaggataacgtgagcgaggtgaacagaact
agtagagagggcgatagcgcccagtcgggaaagacggacgagaaagccactctaaatatg
aagttagctggaaacaacagaatatccaaagcgttgttgcaagttgtgcaggaccagtgt
tcaagcctgtattccacaccacattccttggatagaatcgtggccaatcggagaccatcg
gtcgtttcgcagaaaatcgaagtcaccatttgtgatgactgtgatgcgtgccactgggca
ttagagcagggtaggagtcatgacggctccccagtcaaactggagcaggcagacaaggct
gtgtgtcagcacacgtggccaccgcctaaagctgttgaccagagcagcctgtcgtcgcgt
gacgtggtgcggatgttgcagtcgctgcagccgcttctccaggacgccatccagaagaaa
cgcaccacgaggttatgggagcccaaacctaccgtccagggtcctctcacctggagccag
ttccacaggctggtgggcagaggtggagacgagaacagttcggagcccctgccggtgcct
tcactcctggttggttacgagaaggactggctgtcgctgtctccgttcgctctcaaccac
tgggaaaagctcctgctggaaccgttcggcacctcgcgggatgtcgtgtacgtcgtcatc
tgtccagacaacgacaccatcctcagcaacgccaaggccttcttcagggagttgagtaca
gtgtatgagagctgtagactgggtcgccaccgtccaatcaccacagtcctgcgggacgga
atccggcgtgtcgggaaggtcgcggcagagaggctggcggacaagcctgtggacgagtgg
ttcaacaaacttgatgcggtaccagtgggtaagaagctgaagttgtatgcgcaggtctgc
aaacatgaccttgctgcccacttggccactgtcacgctggacacctcactcctgaaggca
ctgccgacacccggaaagaactctgttacctccaactccagcaacagcaccacggggacc
tcctcctccggaaacacagacaaacccccctccgtccccccacccccctccagcggggat
ggaaaggagggggagtcacctaaggaccctaacaacacgggaggggagagctcggagggt
gggcagaacaaggagaacaaagatggctcccctgacgaggtggacgaggaagcccagccg
ctcgcggtggttgtgtacatcgtggatccgttcagcatgggtcccgaaaacggccacctg
acggacgtgtacgcgctcgggctgctgaagtgttacaccgagattctgcaggccgacctt
ccagacaacgtcagaaacaacatcagtctgcagatcatccctgtgcagcagctggttcag
ccccagaaggctgaggagcgagcgacgtacctgcagcacctgaagacactggccttctcc
gtcttcacacagagccacaggaccctgcagttcaccatccacgccaagtctgtcaccggc
ttcgggccgtccgcacagaatgaggccattctcaagtcaaaagagactgacgtgctgcac
ctgtacacgccaccttacatcctggcaccgcagaaggacaaacagacagaactggtggag
tcgttcggcgagctgacgcccaaatccggggtcctgttctgcgcgtactgtctgtcgtcc
gaccagcggtggatactggccacggtaacggacctgaggggggaactcttggacaccgtc
gtcatcagtgtagaggctccaatcagccccaaacccaggaaggtgtctgcctgcaggatg
ggtctacagaagctgtgggagtttgtgctgtccgtcatcgccacgacaaccttcccatgg
aggatcgtcatcggcaaactgggcaggatcgggcacggagagctcaaagactggagcagc
ctgttgagtcgtcagcgtatcctgaagtccagcaggaacctgaaggaggtgtgtcggatg
tgctcgatgtctccgcagtgcgagtgtcccacaatcctctctgcctgcatggtgtcgctg
gagccagagagcgctctcaggatcttccacgagtcagtgatgtcaggttcggctcctggt
gccaggccgggcggcctgctgggttcccagctcagcaccccacgagacgcgtcctgtaca
cacctcatggccttccccacgtccgccaccacccaggctgcagccgccaacttcagcatc
accgagactatggacctgggcttcgctggaaacacaggtgacatgttgggtgatgatgac
cttctgccggtgctgcaagaggacctcggggactccgatctgaaccagttcctaggtctg
gctgcgtctccaactgcgctgacttctccggtccactccccgcagtcccccacgggaggg
ggcttctccggcggcggacagtccaacccttactcagggggaggggatggcagtggaaaa
acgtcttcctctcagcccctgcctgacccagatgagatccccatgctcctgcagcagccc
ctggccctggggtacttcatctccaccgcacccatcggagacatgcccaagtccttctgg
tccgcctgtcctcatgccgagggggtctgtcccgtgtacctcaagtctgcgctccatgtg
cacacccctgccgtacagcagaactctgaggagatcctccagtctcgacactcccacccc
ctggactccaacctcacatgtgatgtactcaggtatgttttggaaagctacaatgctttg
tcgtggttgacctatgaccccgtgaggagggaccgccgctcttgcctccccgtgcacatg
gtggtgctgaccaagctctacaacaccatggcaacgctgttgacgtaa
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