Branchiostoma floridae (Florida lancelet): 118425436
Help
Entry
118425436 CDS
T01074
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118425436
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
118425436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118425436
NCBI-ProteinID:
XP_035690138
UniProt:
A0A9J7LX25
LinkDB
All DBs
Position
11:6794464..6827650
Genome browser
AA seq
1329 aa
AA seq
DB search
MERKARKSGMEESSVRRTGEVREKELDSTATELANRQDESDQSRKRLIEQSREFKKNTPE
DIRKAVAPLLKSFQAEVDNLSKRSKAAEASFLSVYKKLIDIPDPVPVLEHSQALQKKVQR
AQDVEVENEKLRETLEEYNKEFAEVKNQEVTIKQLREKLRETEEKMESLAQGRAKEKEKE
LQRAFAEKERQLQETQMSVATKLGEAEHKSTTLQNALDSTNAELFELRSKYDELNSAKSD
EMDMIMTDLERANQRAATAEREVETLKEQLKSANESLHLANQMQKAPTMEQAIDILTRSS
LEVEVAAKEREVAQLVEDVQRLQSTLTSLRESTSSQIARLEEEVRKKNLAFRSLEEKLQT
QKDYEEIKRELGIMKSTEFGQREESSDNEDPDGKSLEVLLLEKNRSLQSENTTLKMSNSQ
LTGSSGRSLEPAGMVGLSALDQQNVLAFTTMLGEEIAASFQNGSVNHDKNSQDGKVASNG
NSSRVVVLPANVPLVGANVTTATASTGADELDTWEIARQVKDLLLHNNIGQKVFGQHVLG
MSQGSVSEILSKPKHWSRLTSKGREPFIKMYSWLQDKENIAKLKAAEGRDRGVYDPVRPN
PSESDAAIAMILERARQEMAAQQARARIPPPLPTSPLTRISPVPSSPLTTSIAPHMSPLI
PSSPTLAQSTDLQFPRPPPLSVASMKDNLHVTPSHTVVASTSVVSTAPTATKSTLNSAEP
IIPVSSARQITSMSALSSRLMSIATTRPLSPEPVPSYTTIANFAGMSHPSLPTISPLNKP
PRTVPPPLTSDQYQKFNDIDTMDLTRKIKDTLARLAIGQKVFGEKVLGLSQGSVSDMLAH
PKPWSKLTQKGKEPFIRMQLWLEEVEHTGGDAMGMTSIRNNTPRLTEPRPPEMVVPSSPT
TCSSRITSSTSPPATVATPKHVPPVNKRVPESKPMTIQELVALSPDLDTYAITKRVKEVL
MENNIGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMHLWLSNPEAIAQVK
AIKEEAKAHRRRHSTSSLSDSNSYDGPHHKKQRVVLSPEEKEALRKAYEQEPYPSPSTIE
YLAAKLNLRPCTVTNWFHNYRSRLRRGSFNESHHHQEQQHQQQLQAAISELHQQQLQMLT
INLPATPNDLPTMVVINQDGALNLSSRDNASSLSETVVVATAGNGPNQEQSGKPEAREWD
SRSRDNGLGLTRRHGSENSETVVCKTEVDNWSDTDEMEVEDGNSHSSQEMIMPTPKQVVA
VGRMENPSPGSPADLTPLVAINQDGVLNLSSRDDADDSSQGSQDGRKITAVKRLENSIKE
EEGLDQWEF
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaagcgcggaaatctggcatggaggagtcgtcggtccgtcggactggggaa
gtgcgggagaaagagctggactctactgccacagaattggccaaccgccaggatgagagt
gatcagtcccgcaagagactcattgaacaaagccgggagttcaagaaaaatacacctgag
gacataagaaaagctgttgcacccttattgaaaagcttccaagcagaggtggataacctg
tccaaaaggagcaaagctgcagaggcttctttcctctcagtctacaaaaaacttattgac
attccagaccctgtcccagtgctggagcacagccaggccctgcagaagaaggtacagcgc
gcgcaagatgtggaggtggagaatgagaagctacgcgagacgctggaagaatacaacaag
gagtttgctgaggtcaagaaccaagaggtgaccataaaacagttgcgagaaaagctgcga
gaaacagaagagaaaatggagtccctggctcaggggcgcgccaaggagaaagaaaaggaa
ttgcagcgggcctttgcagaaaaagaaagacaactccaggagactcagatgtctgttgct
actaaactgggcgaggctgagcacaaatctacaaccctgcagaatgctttggattctact
aatgctgagctttttgagctgaggtccaaatatgatgagctgaacagtgcaaagtcggac
gagatggacatgatcatgacagacctggaacgagccaatcagagagcagccacggcagag
agggaggtggaaacgctgaaggaacagctgaagtccgccaacgagtcgctgcacctggca
aatcagatgcagaaggctcccaccatggaacaggccatcgacatcctcacacgctctagt
ctagaggtggaggtggctgccaaggagagagaggttgcccaactcgtggaagatgtccag
cggttgcagagtaccctgacctcgttacgtgagtccacctcatcgcagattgccaggttg
gaagaggaggtacgcaagaagaacctggccttcaggtcactggaagagaaacttcagaca
cagaaggactatgaagaaatcaaaagggagctgggcatcatgaagtcaacagagtttggc
cagagggaagagagtagtgacaatgaggaccctgatgggaagtccctggaggtcctgctt
ctggagaagaaccgaagcctgcagtcggagaacacgactctgaagatgtccaacagtcag
ctcacagggtcctcagggcgaagcttggaacccgcggggatggtgggcctctctgccctg
gaccaacaaaatgtgcttgcattcaccacaatgcttggtgaggaaatagctgcttccttc
cagaacggatcagtcaatcacgataaaaattctcaggacgggaaagtggcaagcaacggc
aactcaagccgtgtggttgttttgccagcaaacgtaccactggtcggagctaacgtgacg
acagcgacggcctctactggagcagatgaacttgacacttgggagatagccaggcaagta
aaggaccttttactccacaacaacattggccagaaggtgtttggccagcatgtcctgggc
atgagccagggatcggtcagtgagatcctgtccaaacctaagcactggtccagactgacc
tccaagggaagggaacccttcatcaaaatgtactcatggcttcaggacaaagaaaatatc
gccaaactcaaggcagcagagggcagggacagaggtgtgtatgaccctgtgcggcctaac
ccatctgaatctgatgccgccatcgccatgattctggagcgagcgcggcaggagatggca
gcacaacaagctcgagcaagaataccccctcctcttcctacgtcccccctgacaagaata
agtcccgtcccttcctcccccctcacaacatccatcgctccgcacatgtctcccctcatc
ccaagctctcctaccttagcacagtctacagacctccagtttcctcgacccccaccacta
tcagtggcttccatgaaggacaatttacatgtgacaccttctcacacagtcgtggcgtca
acttcagttgtgtcgacggcacccacagccacaaaatctacactgaacagtgccgaaccc
atcattccagtttcctcggcacggcaaatcacatcgatgtccgcgttatcatcacgctta
atgtcaatcgcaaccactcgaccattatcaccagaaccagtgcctagctacactaccatt
gcaaactttgccggtatgtcacacccttccctccccaccatctctccactcaacaagccg
ccacgaaccgtgcctccccctctcacctcagaccagtaccagaagtttaacgacatagac
accatggacctgaccagaaaaatcaaagacaccctggcaaggcttgccattggacagaag
gtgttcggggaaaaggtgttaggactctcacagggaagtgtcagtgacatgttagcgcat
cccaaaccgtggtccaagttgacacagaagggaaaagagccgttcatcagaatgcagctg
tggttggaagaagtggagcatactggaggggatgccatgggcatgacgtcgataaggaac
aataccccaagattgacagagcccagaccaccagagatggttgtgccatcctcgccaacc
acgtgtagcagtagaattaccagcagtaccagtccacctgccactgtcgccactccaaaa
cacgtgccaccagtcaacaaaagggtccctgaatctaaaccaatgacaattcaagaactt
gttgccctctcccctgacctagacacatatgccatcacaaagagagtgaaagaagttttg
atggagaacaacataggacagaggctgtttggggagacaatcctgggcctgacacagggg
tctgtaagcgatctactgtccaggcctaagccatggcacaagctcagcttaaagggcaga
gaaccctttgtacgcatgcacctgtggctgagtaacccagaagccattgcacaagtcaag
gccataaaggaagaagccaaagcacatcgccgtcgtcattccacctccagtctttctgac
agcaactcttacgacggccctcatcacaagaagcagcgggttgttctctcccctgaagaa
aaggaggccctgagaaaggcatatgaacaggaaccttacccctcacccagcaccatcgag
tacctggcagccaaactcaaccttcggccgtgcaccgtgaccaactggttccacaactac
cgttcgcgtctgcggcgaggctcattcaacgagagccaccaccaccaggagcagcaacac
cagcagcagctgcaggcggccatcagtgaactacatcaacaacagcttcaaatgctgacc
atcaaccttccagcgacccctaacgacctccccaccatggtcgtcatcaaccaagacggt
gccctcaacctcagcagtagggataacgcttccagtctgtcagaaacggtagtcgtagca
actgcaggaaacggtccgaatcaggagcagtccggaaagcctgaggccagggagtgggac
agtcgcagtagagacaatggtctgggactgacccgaaggcacggttcagaaaactctgag
actgtcgtgtgcaagacagaagtagacaattggagcgacacagacgagatggaggtggag
gatggcaactcccacagcagccaggaaatgattatgccaactccaaaacaggtagtggct
gtaggaaggatggagaacccctccccgggcagccctgctgatctgaccccgctagtggct
attaaccaggatggtgtgctgaacctgagcagcagagatgatgctgacgacagctcacag
ggcagccaggacggcaggaagataacagcagtcaagaggttggagaacagcattaaggag
gaggaggggttggaccagtgggaattctag
DBGET
integrated database retrieval system
