Branchiostoma floridae (Florida lancelet): 118425463
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Entry
118425463 CDS
T01074
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118425463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118425463
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118425463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
118425463
NCBI-ProteinID:
XP_035690179
UniProt:
A0A9J7LYM0
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All DBs
Position
11:complement(22552842..22665059)
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AA seq
432 aa
AA seq
DB search
MDGQSQQTSANSPNDEANDPGKMFIGGLSWQTTADSLREYFCKYGEIKECMVMKDPVTRR
SRGFGFVTFRDPASVDKVLAVSKHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVLEDVKNYFGHYGKIEDAMLMFDKQTNRHRGFGFVTFESEDIVDKVCDIHFHEINNKMV
ECKKAQPKEVMFPPGSARGRARGAFGTWPDLGESFLYLLHPDIVREDGIQAGVYPNFAYG
RGYPFAPGYGYGFPESGHFVFPTGFPAAAYGPPGRASPRGARGRGIMGYPGTGFPDYTYM
APGDQRAYFADYGSVGPASVGPALRPAVGQTEPARVTSSPMHQDYKPVLNSYATQGFAPP
ASPANSRGFPPANSPGPIDMYGGTTSQADTVSSYVAQAASPQPSGFSIAPSSRIKGFGNS
NYAGMVGNPRNF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacggacaaagccagcaaacctccgcaaacagccccaacgatgaagcaaacgaccca
gggaaaatgttcataggggggttgagctggcaaaccacagcagatagccttagagaatac
ttttgcaagtacggagaaatcaaggaatgtatggtgatgaaagatccagtcacccgcaga
tcgagaggtttcggcttcgtgactttcagggaccccgctagtgtagataaagtgttagcc
gttagcaagcatgagctagattccaaaacgattgacccaaaagttgctttccccagaaga
gcacaacccaagatggtcacaagaaccaagaaaatcttcgtgggaggcctgtcagcaaac
actgtattagaagatgtcaagaattacttcggccattacggaaagatagaggatgccatg
ctgatgttcgacaagcagaccaataggcatagaggttttgggtttgtaacattcgagagc
gaagacatcgtggacaaggtgtgcgacatccacttccatgagatcaacaacaagatggtg
gagtgtaagaaagctcagccgaaggaggtgatgttcccgccggggtcggcccgcggccgc
gcccggggcgccttcggaacctggccggatctcggtgagagtttcctatatctcctgcac
cccgatattgttagggaagacggaatccaagctggagtctaccccaactttgcctacggt
cgcggctacccgttcgcacctggatacggctatggcttccctgaaagtggccatttcgtg
ttccccacaggcttcccggccgccgcctacggacctcccggccgagccagcccacgcggc
gcacgcggcaggggcatcatgggataccctggaaccggcttccctgattacacgtacatg
gccccgggggaccagcgcgcctattttgccgattacggcagcgtgggcccggcgagcgtg
ggccccgccctgaggccggccgtgggccaaaccgagccggcccgtgtgactagctcgccc
atgcaccaggactacaagccagtgttgaacagctacgccacccagggcttcgctccgccc
gcgtcccctgccaacagccgcgggttcccgcccgccaacagccccggccccatcgacatg
tacgggggaaccaccagccaggccgacaccgtcagcagctacgtggcgcaggccgcttcc
ccgcagccctcgggcttctccatcgctccctcctcgagaataaaaggattcgggaattcc
aactatgccgggatggtgggcaaccctcgcaacttctga
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