Branchiostoma floridae (Florida lancelet): 118425539
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Entry
118425539 CDS
T01074
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118425539
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118425539
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GFIT
Motif
Pfam:
Ion_trans
Ank_2
TRP_2
Ank
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118425539
NCBI-ProteinID:
XP_035690338
UniProt:
A0A9J7LXP6
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Position
11:8341187..8350920
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AA seq
735 aa
AA seq
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MEENINHLNDKSGEDPRAAQLTLAEKQLLSAAASGDTASVTGLLTNGEGNVNVNCRDVLG
RSAVELAVDAGNLETAKVLLQYGAKPGEALMYAVDKEDMAAVQELLKYSTQKDGSPSAAF
PSEVTPIVLASHKNSLPLIKVLVDQGRFIPDPGVVLSKDDHAHQNLYRGLVSPYYILLTN
DDPLSRAFELSSRLDDVGASKPEVEEVYAEMAEGSRSLSVDLLDQVWNRDEAAAILNCGD
EVSPLVHGDGCQMKLSRLDMAVDHEQKRFVAHQWSQRLVNECWYGAGKYFTPTTNMAEYL
RGFVLMLLTPILALIYLLAPMSVPGRFIRTPAVRFAMYLASVITFIVIILLRAENVGFDG
PEGGQLAPEGTVLEWLIFVWILGMLLEEGRLMVKNGPLASLTAMGIMTWVIIVIYLAAFF
LRIASHVEHGGPKSLYRFYWATYDTTLIAEALTAVGGVLAILRLLPLLTFDRFLGPLALS
MSHMVKDIVKFLIIFFIVSIAFSAGLNEIYSFYSDVVDNICFTQLENATSPLKKTTCETS
NAFGDFESSFEELFWSLFGLGSKDTLNLEVNPKAVSPGDPPLQEHTLTMYVGQALYGLYL
VVAVVVLLNMLIAMMSNSYQHIADNETTEWRFEVTKLMLRYIRDDTTLPVPFNIIPTPKF
IYNKVIKKCCLRQRYKREMDNKLQAQAENNRRYKEVLARLVRRYLLLHEREKGVEPIFAD
FTPHDPVTMATTTYL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatataaaccacctaaacgacaaaagcggagaagacccaagagcagcacag
ctgaccttggcggaaaaacagcttctctctgccgccgcctccggggacacagcgtcggtc
accggcctcctgactaacggcgaagggaacgtgaacgtgaactgcagggatgtgctggga
agatctgcagtggaactggctgtcgatgcaggtaatcttgaaaccgcaaaagtgctgctg
cagtatggcgccaagccgggggaggcgctgatgtacgctgtagacaaggaagacatggct
gcggttcaggagctcctgaaatattccactcagaaggacggctccccgtccgccgccttc
ccgtccgaggtgacgccgattgttctcgccagtcacaagaacagcctccctctcatcaag
gtgctggtggaccagggacggttcattcccgaccctggtgtggtcctcagtaaagatgac
cacgcccaccaaaacctgtaccgtggcctggtcagtccgtactacatcctcctgaccaat
gacgaccctctcagtcgggccttcgagctaagctcgagattggacgacgtcggtgcgagt
aaacccgaagttgaagaagtctacgcggagatggccgaaggctcccggagtttgagcgtc
gatctactcgaccaagtttggaaccgagacgaggcggcggccatcttgaactgtggagac
gaagtctcaccattggtacacggagatggctgccaaatgaagctgtcaagactggacatg
gctgtagatcacgagcaaaagaggtttgtagcccaccagtggagtcagcggctcgtgaac
gagtgctggtacggggccggtaagtacttcacaccgacaaccaacatggcggagtacctc
cgcggcttcgtgttgatgctgctcacaccaatcctggccctaatctacctcttggcaccc
atgtctgtcccggggcgcttcatccgcacgcctgcggtcaggtttgccatgtacctggcc
tccgtcatcacctttatcgtcatcatcttgttgagggcagaaaatgtcggttttgacggg
cctgaaggcggccagctagcaccggaggggactgtactggagtggcttatcttcgtctgg
attctaggtatgctgttggaggaaggtcggctgatggtgaagaacggacctctcgccagt
ctgaccgccatggggataatgacttgggtcatcattgtcatctacttagccgccttcttc
ttacgtatagcttcacacgttgagcacggtgggcctaaatcgctctatcgcttctactgg
gcaacatacgacacgactctcatcgccgaggctctgacggcggtcggcggcgtcctcgcc
atcttgcggctccttcccctgctgacctttgaccggttcctcggacccttggccctgtct
atgagccacatggtcaaggacatcgtcaaattcttgatcatcttcttcatcgtcagcatc
gcgttctccgccgggctgaacgagatctacagcttctatagtgacgtagtcgataacata
tgcttcacacagctggaaaacgccacctcaccgctcaagaagactacttgtgaaacttca
aatgcgtttggcgacttcgagagctcgtttgaggagctgttttggtcactgtttggactg
gggagtaaagacactctaaacctggaagtcaacccgaaggccgtcagtcccggagatcca
cctctacaagaacataccctgacgatgtacgtgggacaggcgctgtacgggctgtacctg
gtggtagccgtggtcgtgctactcaacatgctcatcgccatgatgagtaactcctaccaa
cacatcgcggacaacgagacgactgagtggcgattcgaagtgaccaagttgatgctgcgg
tacatccgtgacgacacgactctacccgtacccttcaacatcatcccaactcccaagttc
atctacaacaaagtcatcaagaagtgctgcttacgtcagcgatacaagcgcgaaatggat
aacaagctgcaagcccaagcagaaaacaatcgacggtacaaggaggtcctagcccgcctg
gtcagacgatacctattactccatgagcgagagaagggtgtcgagccgatctttgcagac
ttcacacctcacgatcccgtcaccatggcaactacaacgtacctttaa
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