Branchiostoma floridae (Florida lancelet): 118425632
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Entry
118425632 CDS
T01074
Name
(RefSeq) general transcription factor IIH subunit 3-like isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
bfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118425632
09124 Replication and repair
03420 Nucleotide excision repair
118425632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118425632
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118425632
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118425632
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118425632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
118425632
NCBI-ProteinID:
XP_035690491
UniProt:
A0A9J7LXD3
LinkDB
All DBs
Position
11:complement(5885917..5894876)
Genome browser
AA seq
314 aa
AA seq
DB search
MVTWQNNMAEGEENLLVVIIDCNPVWWGRRQQQAAEPAQIVLSHCLDAIQVFVNSYLMLS
HKNRVAVIASHTSKTHFLYPKNMADPRLDQRRGEDGRYEQFATVDDTVVEEIKQFMTSDT
TSRELKTDTLLAGSLAVALCYVHRLEKEYQAGQQLNSRVLVIKAAEDSPSQYMNLMNVIF
TAQKQNVVIDACILDKESGLLQQASDITGGIYLKIPQMSGLLQYLLWVFLPDLTMREVMA
LPPKVQVDYRAACFCHRTLIDIGYVCSVCLSIFCSFSPICSTCETAFKLAKPPMFKSKKK
KRSLQNGGPSTSLL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtcacatggcaaaacaacatggcggaaggagaggaaaacctactggtggtgatcata
gactgtaaccctgtgtggtggggcaggagacaacagcaggcagctgagcctgcccagatt
gtgctgtcccactgtctggatgccatacaagtgtttgtcaactcctacctgatgttgtct
cacaagaacagggtggccgtcatcgccagtcacaccagtaaaacacatttcctgtaccct
aagaacatggctgaccccaggttagaccagaggagaggggaggatgggaggtacgaacag
ttcgccactgtagacgacactgttgtggaggagatcaaacagttcatgacatcagatacg
accagcagagagttgaagacagacaccctgctggctggctctcttgcagttgccctctgc
tatgttcataggttagaaaaggagtaccaagcgggacaacaactgaattccagagtattg
gttatcaaggcagcagaagacagcccctcccagtacatgaacctcatgaatgtcatattc
actgcacagaaacagaatgttgttatagatgcctgtatacttgataaggagtcaggacta
ctacaacaggcttctgacatcacggggggcatttacctgaaaataccacagatgtcggga
ctcctgcaatatttactgtgggtgtttctgcctgacctgaccatgcgggaagtcatggct
ctcccacctaaagtacaggtagactacagggccgcctgtttctgtcacaggacactcata
gacataggctacgtctgctctgtctgtctatcaattttctgctccttcagccctatctgt
tccacatgcgagactgctttcaaattagccaaacctcccatgttcaagtcaaagaagaag
aaaagatccttacagaatggagggccgtcaacatcactactgtag
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