Branchiostoma floridae (Florida lancelet): 118425637
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Entry
118425637 CDS
T01074
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118425637
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118425637
04131 Membrane trafficking [BR:
bfo04131
]
118425637
03036 Chromosome and associated proteins [BR:
bfo03036
]
118425637
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118425637
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118425637
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118425637
Membrane trafficking [BR:
bfo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118425637
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118425637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
118425637
NCBI-ProteinID:
XP_035690504
UniProt:
A0A9J7LYC3
LinkDB
All DBs
Position
11:8475432..8488273
Genome browser
AA seq
1137 aa
AA seq
DB search
MEGAVQQPPDSVQPLDRDVQPPLDVQPLSSDVQPPPDTVQPLGKDVQPLPDSLQPLSRDV
QPPTDSVQPQSPPKDGETSSGEHGTSSNVLSFDRTGNLNQPTSTVDIPELDYTSQGEIAA
ISTHVTVPTAGAQLVSRGNDNQGDKPASMENAEQITFPASDNQPTTEGFDSTTEASSISP
SVPENIPRHPTIPPAAEGIVDVVTPNQTKDDSSPEDKNSEQGKGTGSGKKKGRGSKKKNV
TPTGVGRGNTQSLQEAKKKGRKARKAEKELDLLDLSGLSLEERPVPKGTGVVFDERMADY
HCLWEDLSDCKAERPARFTETLTLLRQRGLLDRCVTIPSRPATREEVLSIHSEGLLGKLE
SSVTMTTDQLRQLSETFEDIAIHPKSLECARLSAGCTLQLMDQVLTGNVRNGMAVVRPPG
HHADRDQSCGYCLFNNIAIAARQALTKYSLERVLIVDWDVHFGNGTQDLFYDDPRVLFFS
IHRYEHMEYWPHMERANYSFVGRGAGKGYNVNVPWNKIGLGDPDYMAAFQQVLMPMAYEF
DPQLVLVSAGFDSAVGDRMGKMVTSPVCYAHLLHMLTGLAEGKVCAIMEGGYNIQTLSEC
VAMCVETLLGDPCPPLPPLRPDPSSVETIRNVLGVHRNNWKCFQYPVSTETSEEDQHVQQ
NSEDKSLWRSVGRGTCTSGREVGLVHDEAMMNHVNIWMPGHPEQPYRIRRIMQALDRHRL
QDRCVKLESRLATEEELLYLHTAEHLQLMQETAEMTPRQLNRTQADFNSIFLCNDTYKSA
CLAAGCSMNAVEAVATGSVRSAVAVVRPPGHHAEVDKPCGFCIFNSAALAARFAQKRLGV
GRVLILDWDIHHGNGTQHMFVDDPTVLYISIHRYDNGMFFPGSPDADCTVVGSGPGEGFT
VNVPWSRGGMGDPEYMAAFQQVVMPIAYEYSPELVIISAGFDAARGDPLGHCDVTPPGYA
HMTHMLSSLAGGRVVLLLEGGYNLSSISESMSECTKILLGDPCPPLEYSPPCEEAVQSML
STLHVHQKYWRSLAFQVDVGTKDVCSDEGGDESSTTGTEREPDRPALMDLNLQMEQLSIT
GEEKDNQNTAGGIEEKMPTDGTGSDAAAPPVQNHLQLQPPENMVDQPPTPPVTESSI
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggctgtacaacaaccaccagatagtgtacaacccctggacagagatgtgcaa
ccaccattagatgtacaacccctgagcagtgatgtgcaaccaccaccagatactgtacaa
cccctgggcaaagatgtgcaaccactgccagatagtttacaacccctgagcagagatgtg
caaccaccaacagatagtgtacaacctcagtcaccacccaaagatggagaaacatcatca
ggagaacatgggacatcctccaatgtgctttcctttgacagaactggaaatctaaaccaa
ccaactagtacagtagacattccagaactggactacacttctcagggagaaattgcagcg
atttccacacatgtgacagtgccaactgctggtgcgcaacttgtctcaaggggcaatgac
aaccaaggtgataaaccagcaagcatggagaatgcagaacaaatcacatttccagcatcg
gacaatcaaccaaccacagaaggctttgacagcacaacagaagcaagcagtatttctccg
tctgtccctgaaaacattcctcgccatcccacaattccacctgcagctgaaggtattgtt
gatgtcgtcacaccaaaccagacgaaagatgacagttcaccagaggacaagaatagcgag
cagggtaaggggacaggatcaggcaagaaaaaaggaagaggttccaaaaagaagaatgtc
actcccaccggggtggggaggggaaacactcagtcacttcaagaagcaaagaagaaggga
agaaaagcaagaaaggctgaaaaagagctggacctcctagatttgagtggactgagcctg
gaggaaaggcctgtacccaaagggacgggggtggtgtttgatgagagaatggcagattac
cactgtctgtgggaggacctgagcgactgtaaggcagaacggccagcaaggttcactgag
acgctgacattactgcgacagagaggcttgctggacagatgtgtcaccatcccctcccgc
cctgccactagagaagaggtcctcagtattcactctgagggtctcctggggaaactggag
agcagtgttaccatgacaacagaccagctaagacagctctcagagacttttgaagacata
gccatccaccccaagtctcttgaatgtgctcgtctgtctgctggttgcaccctccaactt
atggaccaagtcctcaccgggaacgtacgcaacggaatggccgtcgtacgccctcccggt
catcacgccgaccgagaccaatcctgtggctactgcctcttcaacaacatcgccatcgca
gccagacaagcgttgacaaagtacagtttggaaagggtgctgatagtcgactgggatgtc
cactttgggaacggaacccaagaccttttctacgatgatccgagggtcctcttcttctcc
atccaccgatacgagcacatggagtactggccacacatggagagagccaactacagcttt
gtcgggaggggggctggaaaaggctataacgtgaatgtgccatggaataagatagggctg
ggagacccagactatatggctgcatttcaacaggttcttatgccgatggcgtatgagttt
gatccgcagcttgtgttggtttctgctgggtttgactcagcagtgggagaccgtatggga
aagatggtcacgtctcctgtctgctatgctcatttacttcacatgctaacaggtctcgct
gaaggaaaagtttgtgccattatggagggagggtacaacatacagacattgtccgagtgt
gtcgccatgtgtgtggaaactctgttgggagacccctgtccgcccctccccccgctacgg
cctgatcccagctccgtggagaccatacggaacgttctcggagttcatcgtaacaactgg
aagtgctttcagtacccagtttcaacagaaaccagcgaggaagatcagcatgtgcaacaa
aactccgaagacaagtccctctggagatccgttggaaggggtacctgtacatcaggacgt
gaggtggggctggtacatgatgaggccatgatgaaccatgtcaacatctggatgcccggc
cacccggaacaaccgtacaggatccgcaggatcatgcaggcactggacaggcacaggctg
caggacaggtgtgttaagttagagtcgagactggctacagaagaggagctgttgtacctg
cacacagctgaacacctgcagctgatgcaggagacagcagagatgacaccccgacagctg
aacagaacacaggcagacttcaactccatcttcctatgtaacgacacatacaagagtgcc
tgtctagcggcagggtgttccatgaacgccgtggaggcggtcgccaccgggagcgtacgt
agtgccgttgctgtcgtccgtccgccgggtcatcatgcagaggtggacaaaccctgcggc
ttctgtatcttcaacagtgccgccctggcagctcgcttcgctcagaagagactgggggta
gggagggtactgatactggactgggatattcaccatggtaacggtacacaacacatgttt
gtggacgacccaacagtgctctacatatctatacacaggtatgacaacggcatgtttttc
cctgggagccccgatgctgactgtaccgtggtggggagcggaccgggggaggggtttact
gtcaacgtgccatggagtaggggaggcatgggggatcctgagtacatggctgcatttcaa
caggttgtgatgcccatagcgtacgagtattcccccgagcttgtcatcatctcagcagga
tttgatgcggcgaggggggaccccctaggccactgtgatgtcacccccccaggctatgcc
cacatgacccacatgctgagcagcctggcaggggggcgggtcgtactactgctggagggg
gggtacaacctgtcatccatctccgagtccatgtcagaatgtaccaaaatcctcctgggg
gacccctgccctccattagagtactcccctccatgtgaagaggcagtacagtccatgttg
agcacccttcatgttcatcagaagtactggagaagtctggctttccaagttgatgttggg
accaaagatgtctgcagtgatgagggaggcgatgagagtagtaccacaggaacagagaga
gaaccagacagaccagcattgatggacctcaatcttcagatggaacaactcagcattaca
ggggaggaaaaggacaatcagaatactgcaggggggatagaagagaagatgccaacagat
gggactggaagtgatgcagcagcgccacctgtccaaaatcatttgcaactgcagccccca
gaaaacatggttgatcaaccaccaacacctccagtaacagagtcatctatttga
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integrated database retrieval system
