Branchiostoma floridae (Florida lancelet): 118425683
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Entry
118425683 CDS
T01074
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118425683
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118425683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
118425683
NCBI-ProteinID:
XP_035690607
UniProt:
A0A9J7LWX4
LinkDB
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Position
11:3854058..3869749
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AA seq
907 aa
AA seq
DB search
MANLMSFRMSSLTDDPDPTRAVPACTAMVAAIRNRDRTGLREKLRDNNVHHFRTVAGDTL
LHLAVRTGDVDIVQILLDVGHMDVNVPGQDHRTALHVAVNSNDIDMVGVLLDNNADIDLQ
DNYAMSPLTLAASRPQCSSELFKHMLRKSDRVTCDRRKGPCVPGSTSDISKKLSVKFSDK
FQSTPMMLVARVGGHDSVVKLSLLLEHGAEITMRDRDGRNVLHHAVEQSESLEVVNRLLE
DPRSGRLINAGDTNGSLPLHYAAKSGFIESLKCLLEAGANRKETNDDDQTALHMASRYGH
LNVAEVLLMVDDAQDRKMLVRAEDRLGRQALHEAASHGHHGIVRLLLHNQAPITETTDGS
SPLHLAVQCGDLKTVMALLEVHRESLHWTDINGDTPLHVAARRNHAHLIDALLYEGNLPE
EGAAMKGNSKRQNALDVAIEAEAQEAAIAMAKHKLWRKVLKHPDDSSHSSKLPQLYNIVK
TIPDAAVEFMDRMVDKEGEVVNPYDVTDKRKAWKYDFSYLNSRDPHRSPLKAIIDHGRWQ
CLQHGLVEKIIERKWNIYGLKIFLAGLLLHIIYVLLITSCTLSEDSLVRGYIDWRNRSLN
GTLNTTETHGMCWGNLLHSSNCALPYLVLVFSVLAIVAEAYKVFSRGMRYRLVWDVRMMN
CTLYVSAFVYALSFPVPAILGGDESARTVVGAIAVLFGWLILVLFLRRIAIIGLYVYMMS
AIFKTLVKVLTVFVLYLIAFSFAFHHLMFKSKVEGFSHPLLTFMTTVGMMIGELELNDSF
ISRTVLYEPGWSKTVVLLLLLLFVLLMNIVVMNLLVALAVDDTHSIDQEASLEQRIQQVE
YILEIESEFGRIVGDRYFQVPDWTAKHKRSWIDQVFNVKKTRIKADRRGGGMNKAGQDQD
AKRLSRV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgatgtcattccgaatgtcgtctcttacggacgacccagatccaacacgc
gcggttcccgcctgtacggcgatggtagcagctatacggaaccgggatcggacgggactc
agggaaaagttacgagacaataacgttcaccactttcgtactgtcgccggcgacacctta
ctacacctggccgtcaggacaggtgacgtcgacatagtacagattcttcttgacgttgga
catatggacgtgaacgtccccggacaggaccacaggacagcccttcacgtagccgtcaac
agtaatgacatagacatggtcggcgtactcctcgacaacaacgctgatatcgacctccag
gataactacgccatgtcacctctgaccctggcagcgtctcgtccccagtgttcatcagaa
ctcttcaagcacatgttgaggaagagtgaccgcgtgacgtgcgatcggaggaaaggacct
tgtgtgcctggttccacctcagacatctccaagaaactgagtgtcaagttcagcgacaag
ttccagtcgacgccgatgatgttggtggcccgtgtcggggggcacgactctgtggtgaag
ctgtctctactgctggagcacggtgccgagatcaccatgagagaccgcgacggtagaaac
gtgctgcaccatgccgtggagcagagcgaatcgctggaagttgtcaacaggcttctggag
gacccaagatctggacgtctcatcaatgctggagacacaaacggcagccttcccctgcac
tatgcagcaaagtctggcttcattgagagtctgaagtgccttcttgaagccggagctaac
aggaaagaaaccaacgacgatgatcagaccgccttacacatggcctccaggtatggccat
ctgaatgtggcggaggttttactgatggtggacgatgcacaggaccgtaagatgctggtg
agggcggaggatagactgggacgtcaggctcttcacgaggcagcttcacacgggcaccac
ggcatcgtgcgtctcctgctccacaaccaagcacccatcaccgagaccacggacggctcc
agcccgctgcacctggccgtgcagtgcggggatctgaagacggtgatggcgctgctcgaa
gttcaccgggagtcccttcattggaccgatatcaacggggacacacccttacacgtggct
gcacgaaggaaccacgcccacctcatcgacgccctgctgtacgaaggcaaccttcctgaa
gaaggcgccgccatgaaggggaacagcaaacgtcagaatgccctggacgtggccatcgag
gcagaggcgcaggaggctgccatagccatggccaagcacaaactgtggcgcaaggttctg
aaacacccggacgactctagccactccagcaaattaccccagctctacaacattgtcaaa
actattcctgacgcggcggtggagttcatggacaggatggttgacaaggagggagaggtg
gttaatccgtatgacgtcacggataagaggaaggcatggaaatatgacttcagttatctt
aattcaagggatcctcatcgttcaccactgaaggcaatcatcgaccatggtcgctggcag
tgcctccagcacggcttggtagagaagatcatagagcgtaaatggaacatatacggactg
aagatcttcctggcaggacttctgctgcacatcatctacgtcctactgatcacgagctgt
acgttgagtgaggattccctggtgagaggctacatagactggcgaaaccgatcactaaac
ggcactctcaacacgaccgagacacacgggatgtgctggggaaacttgctgcactcatcc
aactgcgccttgccgtacttagtcctggttttctccgtgctagccatcgtcgcggaagct
tacaaagtattctctcggggaatgcgctatcggttggtctgggacgtgcgcatgatgaat
tgcacgctgtacgtcagtgccttcgtgtacgctctgagtttccccgtccccgccatcctg
ggcggtgacgagtcggcccggacagtggtgggcgccatcgccgtgctgttcggatggctc
atcctcgtcctgtttctcaggaggatcgccatcatcggcctgtacgtgtacatgatgagc
gccatctttaagaccttggtgaaggtgctgaccgtgttcgtgctgtacctgatcgccttc
agctttgccttccaccacctcatgttcaagtctaaggttgagggattcagccaccctttg
ttgaccttcatgacaactgtaggaatgatgattggggaactcgagctgaacgattccttc
atctccaggaccgttctgtacgaacccggctggagcaaaactgtggtccttctcctcctg
ctgctcttcgtcttgttgatgaacatcgtcgtcatgaatcttttggtggcgctggctgtt
gatgacacacactcaattgaccaggaggcctcgttggaacagcgcatacagcaggttgag
tacattctagaaatagagtcagagttcggaaggattgtgggggatcggtacttccaggtg
ccagactggacagccaagcacaagaggagctggatcgaccaggtctttaacgtgaagaaa
acccggatcaaggcagaccgacgtggtggaggcatgaacaaagccggacaagaccaggac
gccaagagactgtctcgagtgtga
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