KEGG   Branchiostoma floridae (Florida lancelet): 118425764
Entry
118425764         CDS       T01074                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082  ATP-dependent chromatin remodeling
bfo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118425764
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118425764
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bfo01009]
    118425764
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfo03021]
    118425764
   03036 Chromosome and associated proteins [BR:bfo03036]
    118425764
Protein phosphatases and associated proteins [BR:bfo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118425764
Transcription machinery [BR:bfo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118425764
    SWI/SNF complex
     118425764
Chromosome and associated proteins [BR:bfo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    118425764
   PBAF complex
    118425764
   SWI/SNF complex
    118425764
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 118425764
NCBI-ProteinID: XP_035690724
UniProt: A0A9J7N5N7
LinkDB
Position
11:10135154..10166917
AA seq 361 aa
MIGSEVGNYLRMFRGSLYKKYPSLWRRLATIDERKRIAEVLTQAQLEQGAKVGVGDSGHT
SLATNITLLRALEVEDILEGNDEKYKAVSLNTEPIQIKDAKPKRSNWVPALPNSSHHLDA
VPCSTPVNRHRIATKKIRTFPLVFDDHDPSIIHENAAQPEVLIPIRLDMEIDGHKLRDTF
TWNKNEQIITPEQFAEILCDDLELPSLSFVPAIAQAIKTQIEAYPTDNILEEQMDQRVIL
KLNIHVGNISLVDQFEWDMSEKDNSPETFALKLCTELGLGGEFVTAIAYSIRGQLSWHQR
TYAFSEAPLPTVEIAVRNQGEADQWCPFLETLTDAEMEKKIRDQDRNTRRMRRLANTAPS
W
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgataggttctgaggtggggaactatctgcggatgttccgaggctcgctctacaagaag
tacccatcactatggagacgactggccacaatagacgagaggaaacgaattgcggaagtc
ctcacacaagctcaacttgaacagggagccaaagtaggcgtaggtgactctggtcacacc
agcctggcgacgaacatcaccttgctgcgagcgctggaggtagaggatattctggaaggg
aacgatgagaagtacaaggccgtgtcgctcaacaccgaacccatacagatcaaagatgcg
aagcctaagcggagtaactgggtcccagccctgcccaacagttcccaccacctggacgct
gtgccctgctccactcctgttaacagacacaggatcgccaccaagaagatacgcaccttt
cctctcgtattcgacgatcacgatccgtccatcatccatgagaacgcggcccagccggag
gtgcttatccctatcagactggacatggagatagacgggcacaaactgagggacacattc
acatggaataaaaatgaacaaatcatcacaccagagcagtttgctgagatcttgtgtgac
gatctggagctgccatctctgtccttcgtccccgctatcgcccaggccatcaagactcag
atagaggcctaccctacagacaacatcctagaggaacagatggaccagagagtcattctc
aagttgaacatccatgtaggaaacatatctctggtggaccagtttgaatgggacatgtcg
gaaaaggacaacagcccagaaaccttcgcgctcaaactgtgtacggagctcggtctcggc
ggagagttcgtcacggccatcgcatacagcattcgcggacagctcagctggcaccagaga
acctacgctttcagtgaggcaccactaccgacggtggaaatcgcggtgcgtaaccaggga
gaagcggaccagtggtgcccgttcctcgagacactgacagacgctgagatggagaagaag
atacgcgaccaagacagaaatacaaggagaatgagaagacttgccaatactgcaccatcc
tggtag

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