Branchiostoma floridae (Florida lancelet): 118425808
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Entry
118425808 CDS
T01074
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118425808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118425808
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
118425808
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
PrlF_antitoxin
Cob_adeno_trans
YezG-like
Motif
Other DBs
NCBI-GeneID:
118425808
NCBI-ProteinID:
XP_035690796
UniProt:
C3YDE4
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All DBs
Position
11:6758606..6761222
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AA seq
252 aa
AA seq
DB search
MSIFTPTNQIRLTNVAVVRQKRAGKRFEIACYKNKVMGWRSGVEKDIDEVLQTHTVFTNV
SKGEVAKKQDMVKAFGTEDQTEICKQILKKGELQVSEKERHSQLESMYKDIATLVADMCV
NPETKRPYTVGLIEKAMKDVHFSVKPTRNTKQQALEVIKKLKETETINIERAQMRIKFTV
PQREAKKVRTKLTKIAKKVEGENWEDDEFNMVALMDPGCFREVDELIRVETKGKGSMELL
SLKEVEEGDEKF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatttacgccgacaaatcagattcgactgacaaacgtcgcagtcgtcagacag
aagagagcagggaaaagatttgagatcgcttgttacaaaaacaaggtgatgggatggaga
agtggcgtagagaaagacatagatgaagtccttcaaacccacactgtgttcacaaatgtg
tccaagggagaggtggccaagaaacaagacatggtgaaggcatttggcacagaggaccag
acagagatttgtaaacagatattgaagaaaggtgagctgcaggtgtcagagaaggagcgt
cactcccagttagagtccatgtacaaggatatcgctacgctggtagcggacatgtgcgtg
aacccggagacaaagagaccgtacaccgtcgggctgattgagaaggccatgaaggatgtg
cacttttccgtcaaaccaaccagaaatacgaaacaacaggcactggaagtgataaagaaa
ctgaaggagacagaaaccatcaacattgagcgtgcccagatgcgcatcaagttcaccgtt
ccacagcgagaggcaaagaaggtgcggactaagctgaccaagattgccaagaaggtggag
ggagaaaactgggaagatgacgagttcaatatggtggccctgatggaccctgggtgtttc
cgtgaggtggatgagctcatcagagtagagaccaaagggaagggcagcatggagctgctg
agtctgaaagaggtggaggaaggagatgagaagttctga
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