Branchiostoma floridae (Florida lancelet): 118425950
Help
Entry
118425950 CDS
T01074
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03030
DNA replication
bfo03410
Base excision repair
bfo03420
Nucleotide excision repair
bfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118425950
03410 Base excision repair
118425950
03420 Nucleotide excision repair
118425950
03430 Mismatch repair
118425950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfo03032
]
118425950
03036 Chromosome and associated proteins [BR:
bfo03036
]
118425950
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118425950
DNA replication proteins [BR:
bfo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118425950
DNA Replication Termination Factors
ELG1-RFC complex
118425950
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118425950
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118425950
Check point factors
HRAD17(Rad24)-RFC complex
118425950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_11
AAA_assoc_2
AAA_16
AAA_24
RuvB_N
DEAD
ResIII
AAA_14
DUF815
AAA_5
AAA_30
AAA_7
AAA_19
PhoH
TIP49
AAA_3
DNAX_ATPase_lid
Mg_chelatase
AraA_central
Motif
Other DBs
NCBI-GeneID:
118425950
NCBI-ProteinID:
XP_035691014
UniProt:
A0A9J7LZ51
LinkDB
All DBs
Position
11:complement(21644792..21655161)
Genome browser
AA seq
329 aa
AA seq
DB search
MSGGGEHRNLPWVEKYRPKEMTELISHQDIISTIQRFLDEDRLPHLLFYGPPGTGKTSTI
LACARRLYADREFNSMVLELNASDDRGIGIVRGPVLQFASTRTIFKRGFKLVILDEADAM
TGDAQNALRRVMEKFTENTRFCLICNYLSKIIPAIQSRCTRFRFGPLGVDQMLPRLEHVI
QEENVDVTEDGKKAILQLANGDMRRVLNILQSTSMAHDVVDEDNVYLVTGQPLRSDIANI
VNWMLNENFTTAYNNIFQLKVLKGLALQDILTEVHLFVHRIDFPMAVKMVLLQKMADVEY
RLSAGTNEKLQLSSVIAAFQVVRNVAAQA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcggaggggaacatcggaacctgccatgggtagagaagtaccgccccaaggaa
atgacggagctgatctcacatcaggacatcatcagcacaatccagcgtttccttgacgag
gaccgcctgccccacctgctgttctacggcccgccgggtacagggaagacgtccaccatc
ctggcgtgcgctcgccggctgtacgccgacagggagttcaactctatggtgctggagctc
aacgcctcagacgaccgaggaattgggattgtgaggggaccagtcctgcagttcgccagc
acaaggaccatatttaaacgagggttcaagctggttatcctggatgaagctgacgccatg
actggagacgcacagaacgcgctcaggagagttatggagaagtttacagagaacacacgg
ttctgcctcatctgtaactacctgtccaagatcatccctgctatccagtccaggtgcacc
aggttcaggttcggcccgcttggtgtggatcagatgttgcccagactggagcacgtcatc
caggaagaaaacgtggatgtaacagaagatgggaagaaagcgatccttcagctggctaac
ggagacatgagacgagtcttaaacatcctgcagagcacatcgatggcccacgatgttgtg
gacgaggacaacgtttacctggtcaccggacagccgcttcgatctgacatcgctaacatc
gttaactggatgcttaacgagaatttcacaacagcttataacaacatctttcagctgaag
gtgctgaagggtttggctctgcaggacatcctgacggaggtgcacctgttcgtgcacaga
attgatttcccgatggctgtgaagatggttctgttgcagaagatggcagatgtggagtac
cgattgtcggcaggaaccaacgagaaactccagctcagttccgtgatcgcagctttccag
gtggtcaggaacgtggcagcgcaggcgtaa
DBGET
integrated database retrieval system
