Branchiostoma floridae (Florida lancelet): 118425972
Help
Entry
118425972 CDS
T01074
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04142
Lysosome
bfo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118425972
04142 Lysosome
118425972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118425972
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118425972
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118425972
Exosome [BR:
bfo04147
]
Exosomal proteins
Proteins found in most exosomes
118425972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
TPR_2
ANAPC3
Motif
Other DBs
NCBI-GeneID:
118425972
NCBI-ProteinID:
XP_035691051
UniProt:
A0A9J7N681
LinkDB
All DBs
Position
11:complement(9438239..9468384)
Genome browser
AA seq
1701 aa
AA seq
DB search
MAQILPIRFQEHLQLQNVGVNAANIGFSTLTMESDKFICVREKVGDQAQVVIIDLADAAN
PIRRPISADSAIMNPASKVIALKGSGSAGKTLQIFNIEMKSKMKAHNMVEDVTFWKWITV
NTIALVTETAVYHWAMEGDSQPQKMFDRHSSLAGCQIINYRTDAAQKWLLLIGISAQVAQ
SPSSDTQNRVVGAMQLYSVDRKVSQPIEGHAAAFGQFKMEGNSEQSTLFCFGVRGAQGGK
LHIIEVGQAPSGNQPFTKKAVDVFFPPEAQNDFPVAMQVSSKHDVIFLVTKYGYIHLYDL
ESGVCIYMNRISGDTIFVTAPHEATSGVIGVNRKGQVLSVSVEEDNIIPYITNVLQNPDL
ALRMAVRNNLAGAEDLFVRKFNTLFSQGNYSESAKVAANAPKGILRTPQTIQRFQQVPAQ
AGQTSPLLQYFGILLDHGQLNKYESLELCRPVLQQGRKQLLEKWLKEEKLECSEELGDLV
KTSDPTLALSVYLRANVPNKVIQCFAETGQFQKIILYAKKVGYTPDYIFLLRNVMRINPD
QGLQFAQMMVQDEEPMADINQIVDVFMEMNLVQQCTSFLLDALKNNRPSEGALQTRLLEM
NLMSAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAIVHTHLLN
PDWLVNFFGSLSVEDSLECLKAMLQNNIRQNLQIAVQVATKYHEQLTTQSLIDLFESFKS
YEGLFYFLGSIVNFSQEAEVHFKYIQAACKTGQIKEVERICRESNCYDPEKVKNFLKEAK
LTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPARLPVVIGGLLDVDCGED
VIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHDGQTEPATHNALAKIYIDAN
NNPERFLRENPYYDSKVVGKYCEKRDPHLACVAYERGQCDQELIQVCNENSLFKSEARYL
VKRRDPELWATVLIETNEYRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIEL
LEKIVLENSVFSDHSEQGTLSAHRNLQNLLILTAIKADRTRVMEYITRLDNYDAPDIANI
AIGSELYEEAFAIFKKFDVNTSAIQVLIHNISNLDRAYEFAERCNEPGVWSQLAQAQLQQ
GMVKEAIDSYIKADDPSQYMEVVDVANKNGNFEDLVRYLQMARKKSREAYVETELIFAYA
QTNRLAELEEFISGPNTANIQQVGDRCYDAKMYDAAKLLYNNVSNFGRLASTLVHLGEYQ
AAVDSARKANSTRTWKEVCFSCVDGEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEE
LIQLLEAALGLERAHMGMFTELAILYSKYKPQKMREHLELFWSRVNIPKVLRAAEQAHLW
AELVFLYDKYEEYDNAIVTMMAHPTDSWKEGMFKDIITKVANIELYYKALQFYLDYKPML
LNDLLTVLTPRMDHTRAVTFFQKVGHLPLVKPYLRSVQTHNNKALNEALNNLLIEEEDYQ
GLRASIDAFDNFDNIALAQRLEKHELIEFRRISAYLFKGNNRWKQAVELCKRDKLFKDAL
EYAAESRDTETAEELIAWFLEQKNHECFAATLYTCYDLLRPDVILELSWRHNILDFAMPF
FVNVMREYISKVDKLIESEEQRKEEETTTQQPIVYGEPQLMITSGPQIGVPPQQMPPGMV
PGMMPGAAPMPGGYQAPYASM
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattctgcccatccgcttccaggagcacctccagcttcaaaatgttggcgtc
aacgcagcgaatatcgggttcagcaccctcaccatggagtccgacaagttcatctgcgtg
cgggagaaagttggcgaccaggcgcaggtggtcatcatcgacctggctgacgcggccaac
cccattcgccgacccatctccgcagactccgccatcatgaaccccgccagcaaggtcatt
gctttgaaaggcagcggcagtgctggaaagactctgcagatcttcaacattgagatgaag
agtaagatgaaggcccacaacatggtggaggatgtgaccttctggaagtggataactgtc
aacaccatcgccctggtaactgagacggctgtgtaccattgggccatggaaggtgactcg
cagccgcagaagatgtttgaccgccattccagcttggccgggtgccagatcatcaactac
cgcacggacgcagcgcagaagtggcttcttctcatcggcatctcggcacaggtggcccaa
tcaccaagttctgacacgcaaaacagagttgttggtgccatgcagctgtactctgtggac
cgtaaggtcagccagccaatcgaaggccacgcagcggcgttcggtcagttcaagatggaa
ggtaactccgaacagtccacgctgttctgcttcggagtccggggcgcccagggtgggaag
ctacatatcattgaggtgggacaggcgccttctgggaaccaaccattcaccaagaaggca
gtggacgttttcttccctccagaagcacagaatgacttccctgtggccatgcaggtgagc
tctaagcatgacgtcatcttccttgtgaccaaatatggctacatccatctgtacgacttg
gagagcggtgtctgcatctacatgaaccggatcagtggagacaccatctttgtcaccgcg
ccccacgaggccaccagcggtgtcatcggagtcaaccgtaaaggacaggtcctgtctgtg
agtgtggaggaggacaacatcatcccctacatcaccaacgtgctgcagaaccctgacctg
gcactgcgcatggccgtcaggaacaacctggccggcgccgaggacctcttcgtgcgcaag
ttcaacactctgttctcccagggcaactactcggagtccgctaaggtcgcagctaacgca
ccaaaggggatcctgcgtaccccccagacgatccagcgtttccagcaggtcccagcgcag
gctggccagacgtccccactgctgcagtacttcggcatcctgctggaccacgggcagctc
aacaagtacgagtccctggagctgtgccgccccgtcctgcagcaaggcaggaaacagctg
ctggagaaatggctcaaggaggaaaagcttgagtgtagcgaggagcttggagatctagtc
aagacgagcgaccccacactagcactctccgtctaccttcgcgccaacgtgcccaacaag
gtcatccagtgttttgcggagaccgggcagttccagaagatcatcctgtacgccaagaag
gttggctacaccccggactacatcttcctgctgcgtaacgtgatgcgcatcaaccccgac
cagggcctgcagtttgcacagatgatggtgcaagacgaggaaccaatggctgacatcaac
cagattgttgatgtgtttatggagatgaacctggtgcagcagtgcacatccttcctcctg
gatgcgctgaagaacaaccgtccgtcagagggcgcgctccagacacgcctgctggagatg
aacctcatgtctgctccccaggtggcagacgctatcctcgggaaccagatgttcacgcac
tacgaccgcgcccacatcgcccagctgtgcgagaaggcggggctcctgcagcgtgcgctc
gagcactacaccgacctgtacgacatcaagcgtgcaattgtgcacacccacctgctcaac
cctgattggctggtcaacttcttcggctctctgtccgtggaagattcgctggaatgtctg
aaggccatgcttcagaacaatatccgacagaacctacagatcgccgtgcaggtggccaca
aagtaccatgaacagctgaccacccagtccctcattgacttgttcgagtccttcaagagc
tacgaggggctgttctacttcctgggctccatcgtcaacttcagccaggaagctgaggtc
cacttcaagtacatccaggctgcctgcaagactggtcagatcaaggaggttgaacgtatc
tgccgcgagagcaactgttacgatccagagaaggtcaagaacttcctgaaggaagccaaa
ctgacagaccagctcccactgatcatcgtgtgcgaccgattcgactttgtgcacgacctg
gtcctgtacctgtaccgcaacaacctacagaagtacatcgagatctatgtacagaaggtg
aaccctgcgcgtttgcctgttgttatcggaggcctgctggacgtggactgtggggaggac
gtaatcaagaacctcatcatggttgtacgtgggcaattctccactgacgagctggtcgct
gaggtggagaagagaaacaggttgaagcttctgctgccgtggctggaaagtcgtatccac
gatgggcagaccgagcctgccacccacaatgcactggccaagatctacattgacgccaac
aacaaccctgagaggttcctgagggagaacccgtactatgacagtaaggtcgtgggcaag
tactgtgagaagcgggacccacacctcgcatgtgtggcctacgaaagggggcagtgtgat
caggaactcattcaggtgtgcaatgagaactccctgttcaagagcgaggcacgttacctg
gtgaagcggcgcgaccctgagctgtgggccacggtgctgattgaaaccaacgagtaccgc
aggcagctcatcgaccaggtggtgcagacggcactatcagagacccaggacccagaagac
atctctgtgaccgtgaaggccttcatgaccgcggacctgcccaacgaactgatcgagcta
ctggagaagattgttctcgagaactcggtcttctcggaccacagtgagcaggggacactc
tctgcacacaggaacctacagaacttgttgatcctgacggctatcaaggctgaccgcacg
cgtgtcatggagtacatcacccgcctggacaactacgacgctcctgacatcgccaacatt
gccattggctcggagctgtacgaggaagctttcgccatcttcaagaagtttgacgtcaac
acttctgctatccaggtgttgatccacaacatcagtaacctggaccgtgcgtacgagttt
gcggagcgctgtaacgagccgggcgtgtggagccagctggctcaggcccagctgcagcag
gggatggtgaaggaggccatcgactcctacatcaaggctgacgacccctcccagtacatg
gaggtggtggatgtggcaaataagaacggaaacttcgaggacctcgtgcggtacctgcag
atggcgaggaagaagtcgcgtgaagcgtacgtggagacagagctgatcttcgcctacgcc
cagaccaacaggctggccgaactggaggagttcatctccggccccaacaccgccaacatc
caacaggtcggcgacaggtgctatgacgcaaagatgtatgatgcggccaaactgctgtac
aacaacgtgtccaactttgggcgtctggcctccaccctggtccacctgggcgagtaccag
gccgccgtggacagcgcccgcaaggccaacagcacgcgcacgtggaaggaggtgtgcttc
tcgtgtgtggacggcgaggagttccgtctggcgcagatgtgtggtctgcacatcgtggtg
cacgctgacgagctggaggatctcatcaactactaccaggacagaggatattttgaggaa
ctgatccagctgctggaggctgccctgggcctggagcgtgctcacatgggcatgttcacg
gagctggccatcctctactccaagtacaagccacagaagatgagggaacatctggagctc
ttctggtcacgtgtcaacattccaaaggtcctgcgtgcagcagagcaggctcacctgtgg
gcggagctggtgttcctgtacgacaagtacgaggagtacgacaacgccattgtcaccatg
atggctcaccccacagactcctggaaggaaggcatgttcaaggatatcatcactaaggtt
gcaaacatagagctgtactacaaggcactgcagttctacctggattacaagcccatgttg
ctgaacgacctgttgaccgtgctcacgccccgtatggaccacacacgtgctgtcaccttc
ttccagaaggttggccatctgccccttgtgaagccatacctccgctcagtgcaaacccac
aacaacaaggccctaaacgaggccctcaacaacctgctcattgaagaggaagactaccag
ggcttgagagcatccatagatgcgtttgacaactttgacaacatcgccctggcccagagg
ttggaaaagcacgagctgatcgagttccggcggatatcagcgtacctgttcaagggcaac
aaccgctggaagcaggcagtcgaactgtgcaagagagacaagctcttcaaggatgccctg
gaatacgcagccgagtcgcgggacacggaaacggcagaagagctgatcgcctggttcttg
gaacagaagaaccacgagtgctttgcggcaaccctgtacacctgctatgacctgttacgg
ccagacgtcatcctagagctgtcctggaggcataacatcctggactttgccatgccattc
ttcgtcaatgttatgcgggaatacatttcaaaggttgacaaattaatagaatcagaggaa
cagaggaaagaagaagaaaccacaacacaacagccaatagtctatggtgaaccccagttg
atgatcacatctggtcctcagattggtgtcccccctcagcagatgcccccaggaatggta
cccggcatgatgccaggtgccgcacccatgccaggtggctaccaggcaccttacgcctcc
atgtga
DBGET
integrated database retrieval system
