Branchiostoma floridae (Florida lancelet): 118426055
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Entry
118426055 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 33A-like
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04140
Autophagy - animal
bfo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118426055
04148 Efferocytosis
118426055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118426055
Membrane trafficking [BR:
bfo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118426055
Hops complex
118426055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Peptidase_S80
Motif
Other DBs
NCBI-GeneID:
118426055
NCBI-ProteinID:
XP_035691199
UniProt:
A0A9J7M0Q9
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Position
11:11066644..11076897
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AA seq
619 aa
AA seq
DB search
MAASHLSGGRVNLAILREAARKELLECLDKCDGTKAVVWDEQLTGPFGLIAEYSLLKEHE
VDKMFQLRPGRMPAANVNNIIFLCRPKLALMEIVAQNILKEEETGGSRKEFHIFFVPRKS
LLCEQKLKELGVYGTFSNVDEYTLDLIPFDSDLLSMEIDSTFRDCYLEDDMTSMYYAAKS
LMSVQALYGIIPTVCGKGDCARHVADMMLRMRRELAGTEPQITPQIDCLLLLDRTVDLMT
PLPTQLTYEGLIDEIFGINNTSVKLPPEKFASSKQQTGGPQEMPTEPKKLVLNSAEELYA
EARDRNFHAIGPLLSRKAKLISAQFEERHGAKTVGEIKQFVSRLPHMQAAKISLANHTTI
AEMIKEVTDSDHFMESLTVQQEFLNGIDTDKVNPYIEDCIARKEPIIKILRLVCIQSVAN
NGMKQKTLDYYKREILQTYGYEHLITLNNLDRAGLLTVQNXRTYPPSRKTLRLMVDDVSE
QNPNDISYVFSGYAPLSVRLAQFLARPGWRSIEEVLRILPGPTFEEAQRIPVGLRKKRTS
VGGGSESPKVTLVYFLGGVTYAEIAALRFLSQQEDSLSDYIIATTKIINGHTWLEGLMDT
LCPAPFPDSSSTSKSKGRR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcccatctgagtggaggccgagtgaacctcgcgattctgagagaagcagca
cgaaaagaactgcttgaatgtctggacaaatgtgacggaacaaaggccgtggtgtgggat
gaacaactaactggaccatttgggctgattgctgaatattcactgctgaaggaacatgaa
gttgacaagatgttccagctgcgtcctggccgcatgcctgcagcaaacgtcaacaacatc
atcttcctgtgtcggcccaaactggcactcatggagatcgtggcacagaacatactcaaa
gaggaggagactgggggatctcgtaaggagttccacatcttctttgttccaaggaagagc
ctgctttgtgagcagaaactcaaggagctgggtgtgtatggaaccttcagtaatgtggat
gagtacactctggatctcatcccgtttgacagtgacttactctccatggagatagattct
accttcagagattgttacctggaggatgacatgacatccatgtactatgctgccaagtcc
ctgatgtcagtccaggctctgtatggcatcatccctactgtctgtgggaaaggggactgt
gctcggcatgtagcagacatgatgttgcggatgcggcgtgagctggcaggaaccgaaccc
cagatcaccccgcagatcgactgtctcctgctactggacaggactgtggacctcatgacc
cccctccccacacagctcacgtacgaggggctcatcgatgagatctttggcatcaacaac
acttcagtaaaacttcctccagagaagtttgcgtcctcgaagcagcagacaggagggccc
caggagatgcccacagaacccaagaagctggtgctgaactcagcggaagagctgtacgct
gaggcacgagacagaaacttccacgccatcggtcccttactcagcaggaaggccaagctc
atatctgctcagtttgaggagagacatggtgctaagacagttggtgaaatcaagcagttt
gtgtccagacttccccacatgcaggcagcaaaaatatctctcgccaatcacacaacaata
gcagaaatgatcaaggaagtcaccgattcagaccatttcatggaatctctcacagtgcaa
caagagtttttgaatggcattgacacggacaaggtgaacccctatattgaagactgcata
gcaagaaaggaaccaatcatcaagattctgcggttggtgtgtatccagtccgtagctaac
aatggtatgaaacagaagactctggactattacaagagggagatcctacagacttacggc
tatgagcaccttatcaccctgaataacctggacagagcggggctactgacagtacagaac
tagaggacatacccaccctcacgtaaaacactccgactcatggtggacgatgtcagcgaa
cagaacccaaatgacatctcctatgtgttcagtggttacgcccccttgagtgttcgactg
gcccagttcttagccagaccaggttggagaagtatagaagaggtgctgcggatcctgccg
ggaccaacttttgaggaagcacagcggataccagtcggactcagaaagaaacgcacctca
gtaggaggaggcagtgagagtcccaaggtgactctggtgtacttcctggggggagtgacg
tacgcagagatcgcagctctcagatttctatcccaacaggaggacagtttgtcagattat
atcatagcgacaacgaagatcatcaacggacacacctggctggaaggtctgatggacacc
ctctgcccagctccattccccgactcctcatcaacttccaaatctaagggcaggagatag
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